RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
TNC-201ENST00000341037 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
TNC-201ENST00000341037 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 CABP4P57796 275 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 CDCA7LQ96GN5 454 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 MYL6BP14649 208 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 NAT10Q9H0A0 1025 aaKnown RBP13.66□□□□□ -0.22
TNC-201ENST00000341037 IGF1RP08069 1367 aa13.66□□□□□ -0.22
TNC-201ENST00000341037 TATP17735 454 aaPredicted RBP13.65□□□□□ -0.22
TNC-201ENST00000341037 AK7Q96M32 723 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 OFD1O75665 1012 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 SKIDA1Q1XH10 827 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
TNC-201ENST00000341037 TEX35Q5T0J7 233 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
TNC-201ENST00000341037 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
TNC-201ENST00000341037 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
TNC-201ENST00000341037 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 CCAR1Q8IX12 1150 aaKnown RBP13.64□□□□□ -0.23
TNC-201ENST00000341037 SMC2O95347 1197 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 STK3Q13188 491 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 GNAI3P08754 354 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 BRPF1P55201 1214 aaPredicted RBP13.64□□□□□ -0.23
TNC-201ENST00000341037 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 KIF21BO75037 1637 aa13.64□□□□□ -0.23
TNC-201ENST00000341037 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
TNC-201ENST00000341037 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
TNC-201ENST00000341037 GNAI2P04899 355 aa13.62□□□□□ -0.23
TNC-201ENST00000341037 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
TNC-201ENST00000341037 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
TNC-201ENST00000341037 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
TNC-201ENST00000341037 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.23
TNC-201ENST00000341037 SULT6B1Q6IMI4 303 aa13.61□□□□□ -0.23
TNC-201ENST00000341037 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
TNC-201ENST00000341037 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
TNC-201ENST00000341037 NEK4P51957 841 aa13.61□□□□□ -0.23
TNC-201ENST00000341037 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
TNC-201ENST00000341037 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
TNC-201ENST00000341037 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
TNC-201ENST00000341037 MAGEC2Q9UBF1 373 aaPredicted RBP13.61□□□□□ -0.23
TNC-201ENST00000341037 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
TNC-201ENST00000341037 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
TNC-201ENST00000341037 GNL3LQ9NVN8 582 aaKnown RBP13.61□□□□□ -0.23
TNC-201ENST00000341037 HIP1O00291 1037 aa13.6□□□□□ -0.23
TNC-201ENST00000341037 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
TNC-201ENST00000341037 HDGFL1Q5TGJ6 251 aa13.6□□□□□ -0.23
TNC-201ENST00000341037 NASPP49321 788 aaPredicted RBP13.6□□□□□ -0.23
TNC-201ENST00000341037 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
TNC-201ENST00000341037 CABP1Q9NZU7 370 aa13.6□□□□□ -0.23
TNC-201ENST00000341037 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
TNC-201ENST00000341037 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
TNC-201ENST00000341037 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNC-201ENST00000341037 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
TNC-201ENST00000341037 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
TNC-201ENST00000341037 TRIM5Q9C035 493 aa13.59□□□□□ -0.23
TNC-201ENST00000341037 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
TNC-201ENST00000341037 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
TNC-201ENST00000341037 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
TNC-201ENST00000341037 NFKBIBQ15653 356 aa13.59□□□□□ -0.23
TNC-201ENST00000341037 BCAR3O75815 825 aa13.59□□□□□ -0.23
TNC-201ENST00000341037 KINO60870 393 aaKnown RBP13.58□□□□□ -0.23
TNC-201ENST00000341037 TXLNAP40222 546 aa13.58□□□□□ -0.23
TNC-201ENST00000341037 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.23
TNC-201ENST00000341037 CDR1P51861 262 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 FAM43AQ8N2R8 423 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
TNC-201ENST00000341037 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 TSPY26PQ9H489 355 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 FIBPO43427 364 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 CCDC173Q0VFZ6 552 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
TNC-201ENST00000341037 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 ZNF396Q96N95 335 aaPredicted RBP13.57□□□□□ -0.24
TNC-201ENST00000341037 SLC12A5Q9H2X9 1139 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 STK38Q15208 465 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 RRS1Q15050 365 aaKnown RBP13.57□□□□□ -0.24
TNC-201ENST00000341037 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
TNC-201ENST00000341037 CFTRP13569 1480 aa13.57□□□□□ -0.24
TNC-201ENST00000341037 AAMPQ13685 434 aa13.56□□□□□ -0.24
TNC-201ENST00000341037 SYCP1Q15431 976 aa13.56□□□□□ -0.24
TNC-201ENST00000341037 SPC24Q8NBT2 197 aa13.56□□□□□ -0.24
TNC-201ENST00000341037 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
TNC-201ENST00000341037 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
TNC-201ENST00000341037 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
TNC-201ENST00000341037 FILIP1LQ4L180 1135 aa13.56□□□□□ -0.24
TNC-201ENST00000341037 SMARCE1Q969G3 411 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms