RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 PRR36Q9H6K5 1346 aa9.68□□□□□ -0.86
NUP43-201ENST00000340413 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
NUP43-201ENST00000340413 PPP2R1AP30153 589 aa9.68□□□□□ -0.86
NUP43-201ENST00000340413 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
NUP43-201ENST00000340413 PNISRQ8TF01 805 aaKnown RBP9.67□□□□□ -0.86
NUP43-201ENST00000340413 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
NUP43-201ENST00000340413 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
NUP43-201ENST00000340413 RGPD1P0DJD0 1748 aa9.67□□□□□ -0.86
NUP43-201ENST00000340413 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
NUP43-201ENST00000340413 SLC12A5Q9H2X9 1139 aa9.67□□□□□ -0.86
NUP43-201ENST00000340413 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
NUP43-201ENST00000340413 CAMTA1Q9Y6Y1 1673 aa9.66□□□□□ -0.86
NUP43-201ENST00000340413 C19orf44Q9H6X5 657 aa9.66□□□□□ -0.86
NUP43-201ENST00000340413 ZBED9Q6R2W3 1325 aa9.66□□□□□ -0.86
NUP43-201ENST00000340413 LTBP4Q8N2S1 1624 aa9.66□□□□□ -0.86
NUP43-201ENST00000340413 MRS2Q9HD23 443 aa9.65□□□□□ -0.86
NUP43-201ENST00000340413 CFAP53Q96M91 514 aa9.65□□□□□ -0.87
NUP43-201ENST00000340413 CABP1Q9NZU7 370 aa9.65□□□□□ -0.87
NUP43-201ENST00000340413 MSH6P52701 1360 aa9.64□□□□□ -0.87
NUP43-201ENST00000340413 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
NUP43-201ENST00000340413 MORC1Q86VD1 984 aa9.64□□□□□ -0.87
NUP43-201ENST00000340413 AHDC1Q5TGY3 1603 aaPredicted RBP9.64□□□□□ -0.87
NUP43-201ENST00000340413 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
NUP43-201ENST00000340413 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
NUP43-201ENST00000340413 PNNQ9H307 717 aaKnown RBP9.64□□□□□ -0.87
NUP43-201ENST00000340413 TTC21BQ7Z4L5 1316 aa9.63□□□□□ -0.87
NUP43-201ENST00000340413 POLR3GLQ9BT43 218 aa9.63□□□□□ -0.87
NUP43-201ENST00000340413 COL22A1Q8NFW1 1626 aaPredicted RBP9.63□□□□□ -0.87
NUP43-201ENST00000340413 NFAT5O94916 1531 aa9.63□□□□□ -0.87
NUP43-201ENST00000340413 FYB1O15117 783 aa9.63□□□□□ -0.87
NUP43-201ENST00000340413 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
NUP43-201ENST00000340413 ACEP12821 1306 aa9.63□□□□□ -0.87
NUP43-201ENST00000340413 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
NUP43-201ENST00000340413 PXDNQ92626 1479 aa9.61□□□□□ -0.87
NUP43-201ENST00000340413 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
NUP43-201ENST00000340413 PHF8Q9UPP1 1060 aa9.61□□□□□ -0.87
NUP43-201ENST00000340413 ABCA3Q99758 1704 aa9.6□□□□□ -0.87
NUP43-201ENST00000340413 LMO7Q8WWI1 1683 aa9.6□□□□□ -0.87
NUP43-201ENST00000340413 USP19O94966 1318 aa9.6□□□□□ -0.87
NUP43-201ENST00000340413 COG3Q96JB2 828 aa9.6□□□□□ -0.87
NUP43-201ENST00000340413 NCAPD2Q15021 1401 aa9.6□□□□□ -0.87
NUP43-201ENST00000340413 LTN1O94822 1766 aa9.6□□□□□ -0.87
NUP43-201ENST00000340413 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
NUP43-201ENST00000340413 CC2D1BQ5T0F9 858 aaKnown RBP9.59□□□□□ -0.87
NUP43-201ENST00000340413 PSME1Q06323 249 aa9.59□□□□□ -0.87
NUP43-201ENST00000340413 SAFB2Q14151 953 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP43-201ENST00000340413 ARHGEF10O15013 1369 aa9.59□□□□□ -0.87
NUP43-201ENST00000340413 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
NUP43-201ENST00000340413 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
NUP43-201ENST00000340413 TNS3Q68CZ2 1445 aa9.57□□□□□ -0.88
NUP43-201ENST00000340413 ATF3P18847 181 aa9.57□□□□□ -0.88
NUP43-201ENST00000340413 KCNH5Q8NCM2 988 aa9.57□□□□□ -0.88
NUP43-201ENST00000340413 WDR43Q15061 677 aaKnown RBP eCLIP9.57□□□□□ -0.88
NUP43-201ENST00000340413 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
NUP43-201ENST00000340413 FLT4P35916 1363 aa9.56□□□□□ -0.88
NUP43-201ENST00000340413 COL18A1P39060 1754 aa9.56□□□□□ -0.88
NUP43-201ENST00000340413 NGDNQ8NEJ9 315 aaKnown RBP9.55□□□□□ -0.88
NUP43-201ENST00000340413 CPDO75976 1380 aa9.55□□□□□ -0.88
NUP43-201ENST00000340413 PHF23Q9BUL5 403 aaPredicted RBP9.54□□□□□ -0.88
NUP43-201ENST00000340413 CCDC184Q52MB2 194 aa9.54□□□□□ -0.88
NUP43-201ENST00000340413 ZNF521Q96K83 1311 aa9.54□□□□□ -0.88
NUP43-201ENST00000340413 ERICH6BQ5W0A0 696 aa9.54□□□□□ -0.88
NUP43-201ENST00000340413 RUNDC1Q96C34 613 aa9.54□□□□□ -0.88
NUP43-201ENST00000340413 LRRC37A3O60309 1634 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 IL16Q14005 1332 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 FCHSD2O94868 740 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 KDRP35968 1356 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 MTHFSP49914 203 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
NUP43-201ENST00000340413 OVOS2A0A0G2JMS6 1433 aa9.53□□□□□ -0.88
NUP43-201ENST00000340413 ADAMTS7Q9UKP4 1686 aa9.52□□□□□ -0.89
NUP43-201ENST00000340413 DIAPH1O60610 1272 aaKnown RBP9.52□□□□□ -0.89
NUP43-201ENST00000340413 HSPA2P54652 639 aa9.52□□□□□ -0.89
NUP43-201ENST00000340413 NME9Q86XW9 330 aa9.52□□□□□ -0.89
NUP43-201ENST00000340413 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
NUP43-201ENST00000340413 PLCH1Q4KWH8 1693 aa9.51□□□□□ -0.89
NUP43-201ENST00000340413 ROBO1Q9Y6N7 1651 aa9.51□□□□□ -0.89
NUP43-201ENST00000340413 COL14A1Q05707 1796 aaKnown RBP9.51□□□□□ -0.89
NUP43-201ENST00000340413 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
NUP43-201ENST00000340413 IL13P35225 146 aa9.51□□□□□ -0.89
NUP43-201ENST00000340413 WDR63Q8IWG1 891 aa9.51□□□□□ -0.89
NUP43-201ENST00000340413 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
NUP43-201ENST00000340413 CT47B1P0C2W7 299 aaPredicted RBP9.5□□□□□ -0.89
NUP43-201ENST00000340413 C14orf37Q86TY3 774 aa9.5□□□□□ -0.89
NUP43-201ENST00000340413 SPATA31A3Q5VYP0 1347 aa9.5□□□□□ -0.89
NUP43-201ENST00000340413 COL16A1Q07092 1604 aaPredicted RBP9.5□□□□□ -0.89
NUP43-201ENST00000340413 ESCO1Q5FWF5 840 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
NUP43-201ENST00000340413 PLEKHF1Q96S99 279 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 CALD1Q05682 793 aaKnown RBP9.49□□□□□ -0.89
NUP43-201ENST00000340413 LMOD3Q0VAK6 560 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 KRT28Q7Z3Y7 464 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 FAM9BQ8IZU0 186 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 RNF123Q5XPI4 1314 aa9.49□□□□□ -0.89
NUP43-201ENST00000340413 ZNF335Q9H4Z2 1342 aaPredicted RBP9.49□□□□□ -0.89
NUP43-201ENST00000340413 NWD2Q9ULI1 1742 aa9.48□□□□□ -0.89
NUP43-201ENST00000340413 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms