RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ADGRB2O60241 1585 aa21.28■■□□□ 1
LITAF-201ENST00000339430 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
LITAF-201ENST00000339430 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.27■■□□□ 1
LITAF-201ENST00000339430 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
LITAF-201ENST00000339430 NKTRP30414 1462 aaKnown RBP21.26■□□□□ 0.99
LITAF-201ENST00000339430 A0A1W2PP64 1363 aa21.26■□□□□ 0.99
LITAF-201ENST00000339430 RBM33Q96EV2 1170 aaKnown RBP21.26■□□□□ 0.99
LITAF-201ENST00000339430 SHPRHQ149N8 1683 aa21.26■□□□□ 0.99
LITAF-201ENST00000339430 BCAR3O75815 825 aa21.25■□□□□ 0.99
LITAF-201ENST00000339430 NEUROD2Q15784 382 aa21.25■□□□□ 0.99
LITAF-201ENST00000339430 BACH2Q9BYV9 841 aa21.25■□□□□ 0.99
LITAF-201ENST00000339430 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
LITAF-201ENST00000339430 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
LITAF-201ENST00000339430 E9PSI1 815 aa21.24■□□□□ 0.99
LITAF-201ENST00000339430 MS4A1P11836 297 aa21.24■□□□□ 0.99
LITAF-201ENST00000339430 CD163L1Q9NR16 1453 aa21.24■□□□□ 0.99
LITAF-201ENST00000339430 PRR36Q9H6K5 1346 aa21.24■□□□□ 0.99
LITAF-201ENST00000339430 PPIP5K1Q6PFW1 1433 aa21.24■□□□□ 0.99
LITAF-201ENST00000339430 ZBTB47Q9UFB7 747 aaPredicted RBP21.23■□□□□ 0.99
LITAF-201ENST00000339430 RRP7AQ9Y3A4 280 aaKnown RBP21.23■□□□□ 0.99
LITAF-201ENST00000339430 CCDC61Q9Y6R9 512 aa21.23■□□□□ 0.99
LITAF-201ENST00000339430 ATP7BP35670 1465 aa21.22■□□□□ 0.99
LITAF-201ENST00000339430 CGNL1Q0VF96 1302 aa21.22■□□□□ 0.99
LITAF-201ENST00000339430 KDM2BQ8NHM5 1336 aa21.22■□□□□ 0.99
LITAF-201ENST00000339430 HDGFL2Q7Z4V5 671 aaPredicted RBP21.22■□□□□ 0.99
LITAF-201ENST00000339430 MTHFSP49914 203 aa21.21■□□□□ 0.99
LITAF-201ENST00000339430 NBR1Q14596 966 aa21.21■□□□□ 0.99
LITAF-201ENST00000339430 WWC1Q8IX03 1113 aa21.21■□□□□ 0.99
LITAF-201ENST00000339430 STRCQ7RTU9 1775 aa21.19■□□□□ 0.98
LITAF-201ENST00000339430 NWD1Q149M9 1564 aa21.19■□□□□ 0.98
LITAF-201ENST00000339430 CENPQQ7L2Z9 268 aaPredicted RBP21.18■□□□□ 0.98
LITAF-201ENST00000339430 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
LITAF-201ENST00000339430 NALCNQ8IZF0 1738 aa21.17■□□□□ 0.98
LITAF-201ENST00000339430 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
LITAF-201ENST00000339430 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
LITAF-201ENST00000339430 PROSER2Q86WR7 435 aaPredicted RBP21.16■□□□□ 0.98
LITAF-201ENST00000339430 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
LITAF-201ENST00000339430 NGEFQ8N5V2 710 aa21.16■□□□□ 0.98
LITAF-201ENST00000339430 CPSF1Q10570 1443 aaKnown RBP21.15■□□□□ 0.98
LITAF-201ENST00000339430 CFAP53Q96M91 514 aa21.14■□□□□ 0.97
LITAF-201ENST00000339430 TOPAZ1Q8N9V7 1692 aa21.14■□□□□ 0.97
LITAF-201ENST00000339430 CDC42BPGQ6DT37 1551 aa21.14■□□□□ 0.97
LITAF-201ENST00000339430 ADGRL3Q9HAR2 1447 aa21.13■□□□□ 0.97
LITAF-201ENST00000339430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.12■□□□□ 0.97
LITAF-201ENST00000339430 RGPD8O14715 1765 aaPredicted RBP21.12■□□□□ 0.97
LITAF-201ENST00000339430 CANXP27824 592 aaKnown RBP21.12■□□□□ 0.97
LITAF-201ENST00000339430 STRCP1A6NGW2 1772 aa21.12■□□□□ 0.97
LITAF-201ENST00000339430 IQSEC2Q5JU85 1478 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 FYB1O15117 783 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 GGNBP2Q9H3C7 697 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 FMN2Q9NZ56 1722 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 ACEP12821 1306 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 NSD2O96028 1365 aa21.11■□□□□ 0.97
LITAF-201ENST00000339430 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
LITAF-201ENST00000339430 U2AF1L5P0DN76 240 aaPredicted RBP21.1■□□□□ 0.97
LITAF-201ENST00000339430 U2AF1Q01081 240 aaKnown RBP eCLIP21.1■□□□□ 0.97
LITAF-201ENST00000339430 ITSN1Q15811 1721 aa21.1■□□□□ 0.97
LITAF-201ENST00000339430 RGS3P49796 1198 aa21.09■□□□□ 0.97
LITAF-201ENST00000339430 PANK1Q8TE04 598 aa21.09■□□□□ 0.97
LITAF-201ENST00000339430 FRAT1Q92837 279 aaPredicted RBP21.09■□□□□ 0.97
LITAF-201ENST00000339430 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
LITAF-201ENST00000339430 ANKARQ7Z5J8 1434 aa21.09■□□□□ 0.97
LITAF-201ENST00000339430 AKAP12Q02952 1782 aa21.09■□□□□ 0.97
LITAF-201ENST00000339430 EDC4Q6P2E9 1401 aaKnown RBP21.08■□□□□ 0.97
LITAF-201ENST00000339430 COG6Q9Y2V7 657 aa21.08■□□□□ 0.96
LITAF-201ENST00000339430 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
LITAF-201ENST00000339430 TMEM94Q12767 1356 aa21.07■□□□□ 0.96
LITAF-201ENST00000339430 NGDNQ8NEJ9 315 aaKnown RBP21.06■□□□□ 0.96
LITAF-201ENST00000339430 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
LITAF-201ENST00000339430 BCL2L13Q9BXK5 485 aa21.05■□□□□ 0.96
LITAF-201ENST00000339430 KIF20BQ96Q89 1820 aa21.05■□□□□ 0.96
LITAF-201ENST00000339430 IGHDP01880 384 aa21.04■□□□□ 0.96
LITAF-201ENST00000339430 C19orf44Q9H6X5 657 aa21.04■□□□□ 0.96
LITAF-201ENST00000339430 PDE3AQ14432 1141 aa21.04■□□□□ 0.96
LITAF-201ENST00000339430 NME9Q86XW9 330 aa21.04■□□□□ 0.96
LITAF-201ENST00000339430 ZNF335Q9H4Z2 1342 aaPredicted RBP21.04■□□□□ 0.96
LITAF-201ENST00000339430 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
LITAF-201ENST00000339430 RARSP54136 660 aaKnown RBP21.03■□□□□ 0.96
LITAF-201ENST00000339430 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
LITAF-201ENST00000339430 USP6P35125 1406 aa21.02■□□□□ 0.96
LITAF-201ENST00000339430 TNNQ9UQP3 1299 aa21.02■□□□□ 0.96
LITAF-201ENST00000339430 ANKRD26Q9UPS8 1709 aa21.02■□□□□ 0.96
LITAF-201ENST00000339430 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
LITAF-201ENST00000339430 ZRANB1Q9UGI0 708 aa21.01■□□□□ 0.95
LITAF-201ENST00000339430 FAM161AQ3B820 660 aa21.01■□□□□ 0.95
LITAF-201ENST00000339430 C8orf34Q49A92 452 aa21.01■□□□□ 0.95
LITAF-201ENST00000339430 PHF8Q9UPP1 1060 aa21.01■□□□□ 0.95
LITAF-201ENST00000339430 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
LITAF-201ENST00000339430 TTC21BQ7Z4L5 1316 aa21■□□□□ 0.95
LITAF-201ENST00000339430 CLUAP1Q96AJ1 413 aa21■□□□□ 0.95
LITAF-201ENST00000339430 CCDC27Q2M243 656 aa21■□□□□ 0.95
LITAF-201ENST00000339430 NRKQ7Z2Y5 1582 aa20.99■□□□□ 0.95
LITAF-201ENST00000339430 DEKP35659 375 aaKnown RBP20.99■□□□□ 0.95
LITAF-201ENST00000339430 NCOA3Q9Y6Q9 1424 aa20.98■□□□□ 0.95
LITAF-201ENST00000339430 ATF3P18847 181 aa20.97■□□□□ 0.95
LITAF-201ENST00000339430 SSH2Q76I76 1423 aa20.97■□□□□ 0.95
LITAF-201ENST00000339430 RLBP1P12271 317 aa20.97■□□□□ 0.95
LITAF-201ENST00000339430 ORAI2Q96SN7 254 aa20.97■□□□□ 0.95
LITAF-201ENST00000339430 COG3Q96JB2 828 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms