RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 TULP4Q9NRJ4 1543 aa20.65■□□□□ 0.9
COMMD4-202ENST00000338995 CDK19Q9BWU1 502 aa20.64■□□□□ 0.89
COMMD4-202ENST00000338995 SPATA31A5Q5VU36 1347 aa20.63■□□□□ 0.89
COMMD4-202ENST00000338995 SPATA31A7Q8IWB4 1347 aa20.63■□□□□ 0.89
COMMD4-202ENST00000338995 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
COMMD4-202ENST00000338995 PLCH1Q4KWH8 1693 aa20.63■□□□□ 0.89
COMMD4-202ENST00000338995 BRWD3Q6RI45 1802 aa20.62■□□□□ 0.89
COMMD4-202ENST00000338995 EVA1CP58658 441 aa20.61■□□□□ 0.89
COMMD4-202ENST00000338995 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
COMMD4-202ENST00000338995 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
COMMD4-202ENST00000338995 STRN4Q9NRL3 753 aa20.58■□□□□ 0.89
COMMD4-202ENST00000338995 TRPM3Q9HCF6 1732 aaPredicted RBP20.58■□□□□ 0.88
COMMD4-202ENST00000338995 PLEKHG3A1L390 1219 aa20.57■□□□□ 0.88
COMMD4-202ENST00000338995 ZC3H6P61129 1189 aaKnown RBP20.57■□□□□ 0.88
COMMD4-202ENST00000338995 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
COMMD4-202ENST00000338995 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
COMMD4-202ENST00000338995 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
COMMD4-202ENST00000338995 ACEP12821 1306 aa20.56■□□□□ 0.88
COMMD4-202ENST00000338995 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
COMMD4-202ENST00000338995 NUTM2GQ5VZR2 741 aa20.56■□□□□ 0.88
COMMD4-202ENST00000338995 FAM196AQ6ZSG2 479 aa20.56■□□□□ 0.88
COMMD4-202ENST00000338995 ALS2Q96Q42 1657 aa20.56■□□□□ 0.88
COMMD4-202ENST00000338995 KIAA0232Q92628 1395 aa20.56■□□□□ 0.88
COMMD4-202ENST00000338995 EN1Q05925 392 aaPredicted RBP20.55■□□□□ 0.88
COMMD4-202ENST00000338995 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
COMMD4-202ENST00000338995 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
COMMD4-202ENST00000338995 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
COMMD4-202ENST00000338995 PDE3BQ13370 1112 aa20.53■□□□□ 0.88
COMMD4-202ENST00000338995 FAM182BQ5T319 152 aa20.53■□□□□ 0.88
COMMD4-202ENST00000338995 ATP7BP35670 1465 aa20.53■□□□□ 0.88
COMMD4-202ENST00000338995 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-202ENST00000338995 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-202ENST00000338995 USP35Q9P2H5 1018 aa20.52■□□□□ 0.88
COMMD4-202ENST00000338995 ITSN1Q15811 1721 aa20.51■□□□□ 0.87
COMMD4-202ENST00000338995 NRAPQ86VF7 1730 aa20.51■□□□□ 0.87
COMMD4-202ENST00000338995 BARGINQ6ZT62 677 aa20.5■□□□□ 0.87
COMMD4-202ENST00000338995 TRIM37O94972 964 aa20.49■□□□□ 0.87
COMMD4-202ENST00000338995 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
COMMD4-202ENST00000338995 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
COMMD4-202ENST00000338995 ARHGEF28Q8N1W1 1705 aaKnown RBP20.47■□□□□ 0.87
COMMD4-202ENST00000338995 C11orf95C9JLR9 678 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-202ENST00000338995 APBA3O96018 575 aa20.47■□□□□ 0.87
COMMD4-202ENST00000338995 TCP11L2Q8N4U5 519 aa20.47■□□□□ 0.87
COMMD4-202ENST00000338995 THRAP3Q9Y2W1 955 aaKnown RBP20.47■□□□□ 0.87
COMMD4-202ENST00000338995 BRD4O60885 1362 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-202ENST00000338995 GCP02774 474 aa20.46■□□□□ 0.87
COMMD4-202ENST00000338995 R3HDM1Q15032 1099 aaKnown RBP20.45■□□□□ 0.86
COMMD4-202ENST00000338995 EZH2Q15910 746 aaKnown RBP20.45■□□□□ 0.86
COMMD4-202ENST00000338995 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
COMMD4-202ENST00000338995 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
COMMD4-202ENST00000338995 CPDO75976 1380 aa20.44■□□□□ 0.86
COMMD4-202ENST00000338995 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
COMMD4-202ENST00000338995 DISP2A7MBM2 1401 aa20.44■□□□□ 0.86
COMMD4-202ENST00000338995 NLRP6P59044 892 aa20.43■□□□□ 0.86
COMMD4-202ENST00000338995 NBPF14Q5TI25 921 aa20.43■□□□□ 0.86
COMMD4-202ENST00000338995 CAMKK2Q96RR4 588 aa20.43■□□□□ 0.86
COMMD4-202ENST00000338995 RGPD1P0DJD0 1748 aa20.43■□□□□ 0.86
COMMD4-202ENST00000338995 SSH2Q76I76 1423 aa20.43■□□□□ 0.86
COMMD4-202ENST00000338995 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
COMMD4-202ENST00000338995 USP19O94966 1318 aa20.42■□□□□ 0.86
COMMD4-202ENST00000338995 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
COMMD4-202ENST00000338995 PPIP5K1Q6PFW1 1433 aa20.42■□□□□ 0.86
COMMD4-202ENST00000338995 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
COMMD4-202ENST00000338995 CRYBG1Q9Y4K1 1723 aa20.41■□□□□ 0.86
COMMD4-202ENST00000338995 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
COMMD4-202ENST00000338995 EVC2Q86UK5 1308 aa20.4■□□□□ 0.86
COMMD4-202ENST00000338995 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
COMMD4-202ENST00000338995 LRP5O75197 1615 aa20.38■□□□□ 0.85
COMMD4-202ENST00000338995 L3MBTL2Q969R5 705 aa20.37■□□□□ 0.85
COMMD4-202ENST00000338995 PHRF1Q9P1Y6 1649 aaKnown RBP20.37■□□□□ 0.85
COMMD4-202ENST00000338995 CAMTA1Q9Y6Y1 1673 aa20.36■□□□□ 0.85
COMMD4-202ENST00000338995 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
COMMD4-202ENST00000338995 TOM1L2Q6ZVM7 507 aa20.34■□□□□ 0.85
COMMD4-202ENST00000338995 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
COMMD4-202ENST00000338995 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
COMMD4-202ENST00000338995 DDB1Q16531 1140 aa20.33■□□□□ 0.85
COMMD4-202ENST00000338995 CDCA7Q9BWT1 371 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-202ENST00000338995 USP6P35125 1406 aa20.32■□□□□ 0.84
COMMD4-202ENST00000338995 CRB1P82279 1406 aa20.32■□□□□ 0.84
COMMD4-202ENST00000338995 NRKQ7Z2Y5 1582 aa20.31■□□□□ 0.84
COMMD4-202ENST00000338995 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
COMMD4-202ENST00000338995 COL5A2P05997 1499 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-202ENST00000338995 TNS1Q9HBL0 1735 aaKnown RBP20.28■□□□□ 0.84
COMMD4-202ENST00000338995 DCAF8L1A6NGE4 600 aa20.28■□□□□ 0.84
COMMD4-202ENST00000338995 CSB-PGBD3P0DP91 1061 aa20.28■□□□□ 0.84
COMMD4-202ENST00000338995 SIN3AQ96ST3 1273 aa20.28■□□□□ 0.84
COMMD4-202ENST00000338995 ROCK2O75116 1388 aaKnown RBP20.28■□□□□ 0.84
COMMD4-202ENST00000338995 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.84
COMMD4-202ENST00000338995 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.84
COMMD4-202ENST00000338995 PLSCR1O15162 318 aa20.27■□□□□ 0.84
COMMD4-202ENST00000338995 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.83
COMMD4-202ENST00000338995 LMO7Q8WWI1 1683 aa20.26■□□□□ 0.83
COMMD4-202ENST00000338995 ARHGEF25Q86VW2 580 aa20.26■□□□□ 0.83
COMMD4-202ENST00000338995 BCL11BQ9C0K0 894 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-202ENST00000338995 SPON1Q9HCB6 807 aa20.26■□□□□ 0.83
COMMD4-202ENST00000338995 PPP1R1BQ9UD71 204 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-202ENST00000338995 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
COMMD4-202ENST00000338995 OVOS2A0A0J9YW53 1432 aa20.26■□□□□ 0.83
COMMD4-202ENST00000338995 OVOS2Q6IE36 1432 aa20.26■□□□□ 0.83
COMMD4-202ENST00000338995 QRICH2Q9H0J4 1663 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms