RNA–Protein interactions for RNA: ENST00000338487.5

DUPD1-201, Transcript of dual specificity phosphatase and pro isomerase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUPD1, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUPD1-201ENST00000338487 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
DUPD1-201ENST00000338487 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
DUPD1-201ENST00000338487 SLIT2O94813 1529 aa22.87■■□□□ 1.25
DUPD1-201ENST00000338487 PLEKHG3A1L390 1219 aa22.86■■□□□ 1.25
DUPD1-201ENST00000338487 FAM83GA6ND36 823 aa22.86■■□□□ 1.25
DUPD1-201ENST00000338487 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
DUPD1-201ENST00000338487 POLR3AO14802 1390 aaPredicted RBP22.86■■□□□ 1.25
DUPD1-201ENST00000338487 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.85■■□□□ 1.25
DUPD1-201ENST00000338487 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
DUPD1-201ENST00000338487 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
DUPD1-201ENST00000338487 CABP1Q9NZU7 370 aa22.84■■□□□ 1.25
DUPD1-201ENST00000338487 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.25
DUPD1-201ENST00000338487 GLI3P10071 1580 aa22.82■■□□□ 1.24
DUPD1-201ENST00000338487 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.24
DUPD1-201ENST00000338487 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
DUPD1-201ENST00000338487 EVC2Q86UK5 1308 aa22.82■■□□□ 1.24
DUPD1-201ENST00000338487 PHRF1Q9P1Y6 1649 aaKnown RBP22.81■■□□□ 1.24
DUPD1-201ENST00000338487 NWD2Q9ULI1 1742 aa22.8■■□□□ 1.24
DUPD1-201ENST00000338487 NRAPQ86VF7 1730 aa22.79■■□□□ 1.24
DUPD1-201ENST00000338487 ABTB2Q8N961 1025 aa22.78■■□□□ 1.24
DUPD1-201ENST00000338487 COL14A1Q05707 1796 aaKnown RBP22.77■■□□□ 1.24
DUPD1-201ENST00000338487 BTG4Q9NY30 223 aa22.77■■□□□ 1.24
DUPD1-201ENST00000338487 CCDC9Q9Y3X0 531 aaKnown RBP22.77■■□□□ 1.24
DUPD1-201ENST00000338487 BRWD3Q6RI45 1802 aa22.76■■□□□ 1.23
DUPD1-201ENST00000338487 ZC3H6P61129 1189 aaKnown RBP22.76■■□□□ 1.23
DUPD1-201ENST00000338487 CHRNA2Q15822 529 aa22.76■■□□□ 1.23
DUPD1-201ENST00000338487 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
DUPD1-201ENST00000338487 VPS72Q15906 364 aa22.74■■□□□ 1.23
DUPD1-201ENST00000338487 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
DUPD1-201ENST00000338487 USP6P35125 1406 aa22.74■■□□□ 1.23
DUPD1-201ENST00000338487 AKAP12Q02952 1782 aa22.73■■□□□ 1.23
DUPD1-201ENST00000338487 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
DUPD1-201ENST00000338487 PIK3C2AO00443 1686 aa22.7■■□□□ 1.22
DUPD1-201ENST00000338487 SSH2Q76I76 1423 aa22.68■■□□□ 1.22
DUPD1-201ENST00000338487 USP19O94966 1318 aa22.68■■□□□ 1.22
DUPD1-201ENST00000338487 ST20-MTHFSA0A0A6YYL1 179 aa22.68■■□□□ 1.22
DUPD1-201ENST00000338487 SEPT12Q8IYM1 358 aa22.68■■□□□ 1.22
DUPD1-201ENST00000338487 SBNO2Q9Y2G9 1366 aa22.67■■□□□ 1.22
DUPD1-201ENST00000338487 ZBTB7CA1YPR0 619 aa22.67■■□□□ 1.22
DUPD1-201ENST00000338487 NLRP6P59044 892 aa22.67■■□□□ 1.22
DUPD1-201ENST00000338487 STRN4Q9NRL3 753 aa22.67■■□□□ 1.22
DUPD1-201ENST00000338487 ATAD2Q6PL18 1390 aa22.66■■□□□ 1.22
DUPD1-201ENST00000338487 NLRP13Q86W25 1043 aa22.66■■□□□ 1.22
DUPD1-201ENST00000338487 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
DUPD1-201ENST00000338487 TTC21BQ7Z4L5 1316 aa22.65■■□□□ 1.22
DUPD1-201ENST00000338487 FAM98CQ17RN3 349 aaKnown RBP22.65■■□□□ 1.22
DUPD1-201ENST00000338487 A0A0G2JS52 829 aa22.64■■□□□ 1.21
DUPD1-201ENST00000338487 GCP02774 474 aa22.64■■□□□ 1.21
DUPD1-201ENST00000338487 MYT1Q01538 1121 aa22.64■■□□□ 1.21
DUPD1-201ENST00000338487 TESK2Q96S53 571 aa22.64■■□□□ 1.21
DUPD1-201ENST00000338487 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.21
DUPD1-201ENST00000338487 MON2Q7Z3U7 1717 aa22.64■■□□□ 1.21
DUPD1-201ENST00000338487 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
DUPD1-201ENST00000338487 CAMTA1Q9Y6Y1 1673 aa22.63■■□□□ 1.21
DUPD1-201ENST00000338487 ZRANB1Q9UGI0 708 aa22.63■■□□□ 1.21
DUPD1-201ENST00000338487 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
DUPD1-201ENST00000338487 SPATA31A5Q5VU36 1347 aa22.62■■□□□ 1.21
DUPD1-201ENST00000338487 SPATA31A7Q8IWB4 1347 aa22.62■■□□□ 1.21
DUPD1-201ENST00000338487 CD163L1Q9NR16 1453 aa22.62■■□□□ 1.21
DUPD1-201ENST00000338487 EP400Q96L91 3159 aa22.62■■□□□ 1.21
DUPD1-201ENST00000338487 SOX12O15370 315 aa22.62■■□□□ 1.21
DUPD1-201ENST00000338487 LMO7Q8WWI1 1683 aa22.62■■□□□ 1.21
DUPD1-201ENST00000338487 ONECUT3O60422 494 aaPredicted RBP22.61■■□□□ 1.21
DUPD1-201ENST00000338487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
DUPD1-201ENST00000338487 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
DUPD1-201ENST00000338487 BRD4O60885 1362 aaPredicted RBP22.61■■□□□ 1.21
DUPD1-201ENST00000338487 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
DUPD1-201ENST00000338487 SLIT3O75094 1523 aa22.6■■□□□ 1.21
DUPD1-201ENST00000338487 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
DUPD1-201ENST00000338487 CPDO75976 1380 aa22.59■■□□□ 1.21
DUPD1-201ENST00000338487 USP47Q96K76 1375 aa22.59■■□□□ 1.21
DUPD1-201ENST00000338487 EVA1CP58658 441 aa22.58■■□□□ 1.21
DUPD1-201ENST00000338487 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.21
DUPD1-201ENST00000338487 RGPD5Q99666 1765 aa22.58■■□□□ 1.2
DUPD1-201ENST00000338487 SPATA31A1Q5TZJ5 1347 aa22.57■■□□□ 1.2
DUPD1-201ENST00000338487 FAM182BQ5T319 152 aa22.57■■□□□ 1.2
DUPD1-201ENST00000338487 KRT27Q7Z3Y8 459 aa22.56■■□□□ 1.2
DUPD1-201ENST00000338487 NME9Q86XW9 330 aa22.56■■□□□ 1.2
DUPD1-201ENST00000338487 COL18A1P39060 1754 aa22.55■■□□□ 1.2
DUPD1-201ENST00000338487 THSD7AQ9UPZ6 1657 aa22.55■■□□□ 1.2
DUPD1-201ENST00000338487 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
DUPD1-201ENST00000338487 A0A1W2PP64 1363 aa22.54■■□□□ 1.2
DUPD1-201ENST00000338487 TTC21AQ8NDW8 1320 aa22.54■■□□□ 1.2
DUPD1-201ENST00000338487 COL5A2P05997 1499 aaPredicted RBP22.53■■□□□ 1.2
DUPD1-201ENST00000338487 HDGFL2Q7Z4V5 671 aaPredicted RBP22.52■■□□□ 1.2
DUPD1-201ENST00000338487 AXIN2Q9Y2T1 843 aa22.52■■□□□ 1.2
DUPD1-201ENST00000338487 TIMELESSQ9UNS1 1208 aa22.5■■□□□ 1.19
DUPD1-201ENST00000338487 NFAT5O94916 1531 aa22.5■■□□□ 1.19
DUPD1-201ENST00000338487 TERF2IPQ9NYB0 399 aa22.49■■□□□ 1.19
DUPD1-201ENST00000338487 AATKQ6ZMQ8 1374 aa22.49■■□□□ 1.19
DUPD1-201ENST00000338487 DEFB132Q7Z7B7 95 aa22.48■■□□□ 1.19
DUPD1-201ENST00000338487 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
DUPD1-201ENST00000338487 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
DUPD1-201ENST00000338487 LTN1O94822 1766 aa22.47■■□□□ 1.19
DUPD1-201ENST00000338487 EDC4Q6P2E9 1401 aaKnown RBP22.47■■□□□ 1.19
DUPD1-201ENST00000338487 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
DUPD1-201ENST00000338487 TMF1P82094 1093 aa22.46■■□□□ 1.19
DUPD1-201ENST00000338487 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
DUPD1-201ENST00000338487 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
DUPD1-201ENST00000338487 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms