RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 COL16A1Q07092 1604 aaPredicted RBP11.89□□□□□ -0.51
TREM1-202ENST00000334475 SHPRHQ149N8 1683 aa11.88□□□□□ -0.51
TREM1-202ENST00000334475 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
TREM1-202ENST00000334475 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
TREM1-202ENST00000334475 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
TREM1-202ENST00000334475 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
TREM1-202ENST00000334475 EID1Q9Y6B2 187 aa11.87□□□□□ -0.51
TREM1-202ENST00000334475 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
TREM1-202ENST00000334475 NRXN3Q9Y4C0 1643 aa11.86□□□□□ -0.51
TREM1-202ENST00000334475 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
TREM1-202ENST00000334475 CARD14Q9BXL6 1004 aa11.86□□□□□ -0.51
TREM1-202ENST00000334475 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
TREM1-202ENST00000334475 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
TREM1-202ENST00000334475 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
TREM1-202ENST00000334475 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
TREM1-202ENST00000334475 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
TREM1-202ENST00000334475 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
TREM1-202ENST00000334475 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
TREM1-202ENST00000334475 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.51
TREM1-202ENST00000334475 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
TREM1-202ENST00000334475 ABCC11Q96J66 1382 aa11.83□□□□□ -0.52
TREM1-202ENST00000334475 RRP1P56182 461 aaKnown RBP11.83□□□□□ -0.52
TREM1-202ENST00000334475 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
TREM1-202ENST00000334475 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
TREM1-202ENST00000334475 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
TREM1-202ENST00000334475 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.52
TREM1-202ENST00000334475 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
TREM1-202ENST00000334475 MORC1Q86VD1 984 aa11.82□□□□□ -0.52
TREM1-202ENST00000334475 TECPR2O15040 1411 aa11.82□□□□□ -0.52
TREM1-202ENST00000334475 ADAMTS13Q76LX8 1427 aa11.82□□□□□ -0.52
TREM1-202ENST00000334475 ATP7BP35670 1465 aa11.82□□□□□ -0.52
TREM1-202ENST00000334475 JCADQ9P266 1359 aa11.81□□□□□ -0.52
TREM1-202ENST00000334475 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
TREM1-202ENST00000334475 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
TREM1-202ENST00000334475 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
TREM1-202ENST00000334475 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
TREM1-202ENST00000334475 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
TREM1-202ENST00000334475 POGKQ9P215 609 aa11.8□□□□□ -0.52
TREM1-202ENST00000334475 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
TREM1-202ENST00000334475 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
TREM1-202ENST00000334475 MSH6P52701 1360 aa11.79□□□□□ -0.52
TREM1-202ENST00000334475 PLEKHG1Q9ULL1 1385 aa11.79□□□□□ -0.52
TREM1-202ENST00000334475 CFAP53Q96M91 514 aa11.79□□□□□ -0.52
TREM1-202ENST00000334475 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
TREM1-202ENST00000334475 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
TREM1-202ENST00000334475 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
TREM1-202ENST00000334475 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
TREM1-202ENST00000334475 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
TREM1-202ENST00000334475 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
TREM1-202ENST00000334475 ADGRB2O60241 1585 aa11.78□□□□□ -0.52
TREM1-202ENST00000334475 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
TREM1-202ENST00000334475 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.53
TREM1-202ENST00000334475 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
TREM1-202ENST00000334475 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
TREM1-202ENST00000334475 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
TREM1-202ENST00000334475 MON2Q7Z3U7 1717 aa11.77□□□□□ -0.53
TREM1-202ENST00000334475 AKAP12Q02952 1782 aa11.77□□□□□ -0.53
TREM1-202ENST00000334475 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
TREM1-202ENST00000334475 TRMT2AQ8IZ69 625 aaKnown RBP11.76□□□□□ -0.53
TREM1-202ENST00000334475 DDX17Q92841 729 aaKnown RBP11.76□□□□□ -0.53
TREM1-202ENST00000334475 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
TREM1-202ENST00000334475 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
TREM1-202ENST00000334475 STK26Q9P289 416 aa11.76□□□□□ -0.53
TREM1-202ENST00000334475 SLFN5Q08AF3 891 aa11.75□□□□□ -0.53
TREM1-202ENST00000334475 DUSP27Q5VZP5 1158 aa11.75□□□□□ -0.53
TREM1-202ENST00000334475 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
TREM1-202ENST00000334475 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
TREM1-202ENST00000334475 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
TREM1-202ENST00000334475 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
TREM1-202ENST00000334475 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
TREM1-202ENST00000334475 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
TREM1-202ENST00000334475 E9PSI1 815 aa11.74□□□□□ -0.53
TREM1-202ENST00000334475 RUNDC1Q96C34 613 aa11.74□□□□□ -0.53
TREM1-202ENST00000334475 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
TREM1-202ENST00000334475 COL3A1P02461 1466 aaPredicted RBP11.74□□□□□ -0.53
TREM1-202ENST00000334475 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
TREM1-202ENST00000334475 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
TREM1-202ENST00000334475 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
TREM1-202ENST00000334475 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
TREM1-202ENST00000334475 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
TREM1-202ENST00000334475 TOPAZ1Q8N9V7 1692 aa11.72□□□□□ -0.53
TREM1-202ENST00000334475 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
TREM1-202ENST00000334475 APAF1O14727 1248 aa11.72□□□□□ -0.53
TREM1-202ENST00000334475 RGS12O14924 1447 aa11.71□□□□□ -0.53
TREM1-202ENST00000334475 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.53
TREM1-202ENST00000334475 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
TREM1-202ENST00000334475 MTHFSP49914 203 aa11.71□□□□□ -0.53
TREM1-202ENST00000334475 SAFB2Q14151 953 aaKnown RBP eCLIP11.71□□□□□ -0.53
TREM1-202ENST00000334475 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
TREM1-202ENST00000334475 CPSF1Q10570 1443 aaKnown RBP11.7□□□□□ -0.54
TREM1-202ENST00000334475 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
TREM1-202ENST00000334475 AFF2P51816 1311 aa11.7□□□□□ -0.54
TREM1-202ENST00000334475 XRN1Q8IZH2 1706 aaKnown RBP11.7□□□□□ -0.54
TREM1-202ENST00000334475 MEX3CQ5U5Q3 659 aaKnown RBP11.7□□□□□ -0.54
TREM1-202ENST00000334475 CCDC146Q8IYE0 955 aa11.7□□□□□ -0.54
TREM1-202ENST00000334475 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
TREM1-202ENST00000334475 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
TREM1-202ENST00000334475 MST1RQ04912 1400 aa11.69□□□□□ -0.54
TREM1-202ENST00000334475 METP08581 1390 aa11.69□□□□□ -0.54
TREM1-202ENST00000334475 NHSL1Q5SYE7 1610 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms