RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 ZKSCAN1P17029 563 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 BRPF1P55201 1214 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 LRRFIP1Q32MZ4 808 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 RASSF4Q9H2L5 321 aa12.25□□□□□ -0.45
SPTBN1-201ENST00000333896 IPO4Q8TEX9 1081 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-201ENST00000333896 SPC24Q8NBT2 197 aa12.24□□□□□ -0.45
SPTBN1-201ENST00000333896 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-201ENST00000333896 TNNT1P13805 278 aa12.24□□□□□ -0.45
SPTBN1-201ENST00000333896 CRBNQ96SW2 442 aa12.24□□□□□ -0.45
SPTBN1-201ENST00000333896 MRVI1Q9Y6F6 885 aa12.24□□□□□ -0.45
SPTBN1-201ENST00000333896 ERICH2A1L162 156 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 MPHOSPH10O00566 681 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 PIP4K2AP48426 406 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 CCDC181Q5TID7 509 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 FYB1O15117 783 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 RNF214Q8ND24 703 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 KINO60870 393 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 CFAP45Q9UL16 551 aa12.23□□□□□ -0.45
SPTBN1-201ENST00000333896 CRACR2AQ9BSW2 395 aa12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 MIPOL1Q8TD10 442 aa12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 TRDNQ13061 729 aa12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 A0A1B0GUA9 196 aa12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
SPTBN1-201ENST00000333896 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■□□ 15.9
SPTBN1-201ENST00000333896 TUBB4AP04350 444 aa12.21□□□□□ -0.45
SPTBN1-201ENST00000333896 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-201ENST00000333896 SH3BGRP55822 239 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-201ENST00000333896 MYCBPQ99417 103 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-201ENST00000333896 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-201ENST00000333896 KIF3BO15066 747 aa12.21□□□□□ -0.46
SPTBN1-201ENST00000333896 CAVIN2O95810 425 aa12.21□□□□□ -0.46
SPTBN1-201ENST00000333896 TMEM132AQ24JP5 1023 aa12.21□□□□□ -0.46
SPTBN1-201ENST00000333896 PPM1EQ8WY54 764 aa12.21□□□□□ -0.46
SPTBN1-201ENST00000333896 JAKMIP3Q5VZ66 844 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 CCDC102AQ96A19 550 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 STK26Q9P289 416 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 GABPB1Q06547 395 aaPredicted RBP12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 FILIP1LQ4L180 1135 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 SDF4Q9BRK5 362 aa12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
SPTBN1-201ENST00000333896 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 WWC2Q6AWC2 1192 aa12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 AK9Q5TCS8 1911 aa12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 A0A1B0GUL7 405 aa12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 SUDS3Q9H7L9 328 aaPredicted RBP12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
SPTBN1-201ENST00000333896 MSH5O43196 834 aa12.18□□□□□ -0.46
SPTBN1-201ENST00000333896 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
SPTBN1-201ENST00000333896 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
SPTBN1-201ENST00000333896 STAMBPO95630 424 aa12.18□□□□□ -0.46
SPTBN1-201ENST00000333896 GON4LQ3T8J9 2241 aa12.18□□□□□ -0.46
SPTBN1-201ENST00000333896 WDR33Q9C0J8 1336 aaKnown RBP12.18□□□□□ -0.46
SPTBN1-201ENST00000333896 ZNHIT6Q9NWK9 470 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 OGFRQ9NZT2 677 aa12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 SEPT6Q14141 434 aa12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 CCDC50Q8IVM0 306 aa12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 GBP6Q6ZN66 633 aa12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 RSRC1Q96IZ7 334 aaKnown RBP12.17□□□□□ -0.46
SPTBN1-201ENST00000333896 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 PUS7Q96PZ0 661 aaKnown RBP12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 A6NNZ2 444 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 TUBB8Q3ZCM7 444 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 CDC45O75419 566 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 KANK1Q14678 1352 aa12.16□□□□□ -0.46
SPTBN1-201ENST00000333896 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
SPTBN1-201ENST00000333896 KDM4AO75164 1064 aa12.15□□□□□ -0.46
SPTBN1-201ENST00000333896 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.467e-6■■■■□ 21.3
SPTBN1-201ENST00000333896 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
SPTBN1-201ENST00000333896 RNF168Q8IYW5 571 aaPredicted RBP12.15□□□□□ -0.46
SPTBN1-201ENST00000333896 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.46
SPTBN1-201ENST00000333896 GSDMDP57764 484 aa12.14□□□□□ -0.47
SPTBN1-201ENST00000333896 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
SPTBN1-201ENST00000333896 CCDC171Q6TFL3 1326 aa12.14□□□□□ -0.47
SPTBN1-201ENST00000333896 HSPA4P34932 840 aa12.14□□□□□ -0.47
SPTBN1-201ENST00000333896 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
SPTBN1-201ENST00000333896 CUX1P39880 1505 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms