RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLN8-201ENST00000331222 USP47Q96K76 1375 aa12.65□□□□□ -0.38
CLN8-201ENST00000331222 ENOX2Q16206 610 aaKnown RBP12.65□□□□□ -0.39
CLN8-201ENST00000331222 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.39
CLN8-201ENST00000331222 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
CLN8-201ENST00000331222 SEPT7Q16181 437 aaKnown RBP12.64□□□□□ -0.39
CLN8-201ENST00000331222 SPDYE4A6NLX3 237 aa12.64□□□□□ -0.39
CLN8-201ENST00000331222 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
CLN8-201ENST00000331222 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
CLN8-201ENST00000331222 SSR1P43307 286 aaKnown RBP12.64□□□□□ -0.39
CLN8-201ENST00000331222 ROCK1Q13464 1354 aa12.64□□□□□ -0.39
CLN8-201ENST00000331222 H0YHG0 523 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 CABP4P57796 275 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 PSMD1Q99460 953 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 UACAQ9BZF9 1416 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 SLC3A2P08195 630 aaKnown RBP12.63□□□□□ -0.39
CLN8-201ENST00000331222 TRMT1LQ7Z2T5 733 aaKnown RBP12.63□□□□□ -0.39
CLN8-201ENST00000331222 FAM193AP78312 1265 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 TRIM5Q9C035 493 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 PHLDB1Q86UU1 1377 aa12.63□□□□□ -0.39
CLN8-201ENST00000331222 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
CLN8-201ENST00000331222 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
CLN8-201ENST00000331222 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
CLN8-201ENST00000331222 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
CLN8-201ENST00000331222 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
CLN8-201ENST00000331222 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
CLN8-201ENST00000331222 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
CLN8-201ENST00000331222 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
CLN8-201ENST00000331222 AXDND1Q5T1B0 1012 aaPredicted RBP12.62□□□□□ -0.39
CLN8-201ENST00000331222 NEBLO76041 1014 aa12.61□□□□□ -0.39
CLN8-201ENST00000331222 CDR1P51861 262 aa12.61□□□□□ -0.39
CLN8-201ENST00000331222 NAT10Q9H0A0 1025 aaKnown RBP12.61□□□□□ -0.39
CLN8-201ENST00000331222 SLC4A8Q2Y0W8 1093 aa12.61□□□□□ -0.39
CLN8-201ENST00000331222 FIBPO43427 364 aa12.61□□□□□ -0.39
CLN8-201ENST00000331222 DEF6Q9H4E7 631 aa12.61□□□□□ -0.39
CLN8-201ENST00000331222 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
CLN8-201ENST00000331222 TXLNAP40222 546 aa12.6□□□□□ -0.39
CLN8-201ENST00000331222 CCDC69A6NI79 296 aa12.6□□□□□ -0.39
CLN8-201ENST00000331222 GRM1Q13255 1194 aa12.6□□□□□ -0.39
CLN8-201ENST00000331222 ZNF76P36508 570 aa12.6□□□□□ -0.39
CLN8-201ENST00000331222 TTLL12Q14166 644 aaPredicted RBP12.6□□□□□ -0.39
CLN8-201ENST00000331222 WDR78Q5VTH9 848 aa12.6□□□□□ -0.39
CLN8-201ENST00000331222 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
CLN8-201ENST00000331222 RDXP35241 583 aaKnown RBP12.59□□□□□ -0.39
CLN8-201ENST00000331222 TSPYL1Q9H0U9 437 aa12.59□□□□□ -0.39
CLN8-201ENST00000331222 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
CLN8-201ENST00000331222 MPHOSPH8Q99549 860 aa12.59□□□□□ -0.39
CLN8-201ENST00000331222 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
CLN8-201ENST00000331222 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
CLN8-201ENST00000331222 PSMA5P28066 241 aa12.59□□□□□ -0.39
CLN8-201ENST00000331222 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
CLN8-201ENST00000331222 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
CLN8-201ENST00000331222 SERPINC1P01008 464 aa12.58□□□□□ -0.39
CLN8-201ENST00000331222 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.39
CLN8-201ENST00000331222 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
CLN8-201ENST00000331222 PRPF40AO75400 957 aaKnown RBP12.58□□□□□ -0.4
CLN8-201ENST00000331222 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
CLN8-201ENST00000331222 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
CLN8-201ENST00000331222 ARGLU1Q9NWB6 273 aaPredicted RBP12.58□□□□□ -0.4
CLN8-201ENST00000331222 CA8P35219 290 aa12.58□□□□□ -0.4
CLN8-201ENST00000331222 NEK4P51957 841 aa12.58□□□□□ -0.4
CLN8-201ENST00000331222 GNAI1P63096 354 aa12.58□□□□□ -0.4
CLN8-201ENST00000331222 MTHFSP49914 203 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
CLN8-201ENST00000331222 HSP90AB4PQ58FF6 505 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 CHMP5Q9NZZ3 219 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 MYO6Q9UM54 1294 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 SCLT1Q96NL6 688 aa12.57□□□□□ -0.4
CLN8-201ENST00000331222 LIG1P18858 919 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
CLN8-201ENST00000331222 ACBD3Q9H3P7 528 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
CLN8-201ENST00000331222 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
CLN8-201ENST00000331222 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
CLN8-201ENST00000331222 NFKBIBQ15653 356 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 GNL3LQ9NVN8 582 aaKnown RBP12.56□□□□□ -0.4
CLN8-201ENST00000331222 STK38Q15208 465 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 WWC3Q9ULE0 1092 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
CLN8-201ENST00000331222 TDO2P48775 406 aa12.55□□□□□ -0.4
CLN8-201ENST00000331222 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
CLN8-201ENST00000331222 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
CLN8-201ENST00000331222 CCDC181Q5TID7 509 aa12.55□□□□□ -0.4
CLN8-201ENST00000331222 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
CLN8-201ENST00000331222 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
CLN8-201ENST00000331222 ME1P48163 572 aa12.55□□□□□ -0.4
CLN8-201ENST00000331222 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
CLN8-201ENST00000331222 CCDC57Q2TAC2 916 aa12.55□□□□□ -0.4
CLN8-201ENST00000331222 NUCB2P80303 420 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 TMEM87AQ8NBN3 555 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 MIS18AQ9NYP9 233 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 ABCF2Q9UG63 623 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
CLN8-201ENST00000331222 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms