RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 PRR36Q9H6K5 1346 aa29.11■■■□□ 2.25
SSNA1-201ENST00000322310 GPRASP1Q5JY77 1395 aa29.11■■■□□ 2.25
SSNA1-201ENST00000322310 ACIN1Q9UKV3 1341 aaKnown RBP29.1■■■□□ 2.25
SSNA1-201ENST00000322310 TRAK1Q9UPV9 953 aa29.08■■■□□ 2.25
SSNA1-201ENST00000322310 MINK1Q8N4C8 1332 aaPredicted RBP29.08■■■□□ 2.25
SSNA1-201ENST00000322310 ADGRB1O14514 1584 aa29.08■■■□□ 2.25
SSNA1-201ENST00000322310 THSD7AQ9UPZ6 1657 aa29.08■■■□□ 2.25
SSNA1-201ENST00000322310 TNS1Q9HBL0 1735 aaKnown RBP29.06■■■□□ 2.24
SSNA1-201ENST00000322310 CRYBG1Q9Y4K1 1723 aa29.06■■■□□ 2.24
SSNA1-201ENST00000322310 DISP2A7MBM2 1401 aa29.05■■■□□ 2.24
SSNA1-201ENST00000322310 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
SSNA1-201ENST00000322310 EZH2Q15910 746 aaKnown RBP29.04■■■□□ 2.24
SSNA1-201ENST00000322310 PRDM11Q9NQV5 511 aa29.04■■■□□ 2.24
SSNA1-201ENST00000322310 PAK3O75914 559 aaPredicted RBP29.03■■■□□ 2.24
SSNA1-201ENST00000322310 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
SSNA1-201ENST00000322310 EIF3AQ14152 1382 aaKnown RBP29.01■■■□□ 2.24
SSNA1-201ENST00000322310 WASLO00401 505 aaPredicted RBP29■■■□□ 2.23
SSNA1-201ENST00000322310 SPATA31A1Q5TZJ5 1347 aa28.98■■■□□ 2.23
SSNA1-201ENST00000322310 TRIM37O94972 964 aa28.98■■■□□ 2.23
SSNA1-201ENST00000322310 KIAA0232Q92628 1395 aa28.98■■■□□ 2.23
SSNA1-201ENST00000322310 CHRNA2Q15822 529 aa28.97■■■□□ 2.23
SSNA1-201ENST00000322310 CAMKK2Q96RR4 588 aa28.97■■■□□ 2.23
SSNA1-201ENST00000322310 STRN4Q9NRL3 753 aa28.96■■■□□ 2.23
SSNA1-201ENST00000322310 KDM2AQ9Y2K7 1162 aa28.94■■■□□ 2.22
SSNA1-201ENST00000322310 FAM196AQ6ZSG2 479 aa28.93■■■□□ 2.22
SSNA1-201ENST00000322310 PHRF1Q9P1Y6 1649 aaKnown RBP28.91■■■□□ 2.22
SSNA1-201ENST00000322310 APBA3O96018 575 aa28.91■■■□□ 2.22
SSNA1-201ENST00000322310 NUTM2GQ5VZR2 741 aa28.91■■■□□ 2.22
SSNA1-201ENST00000322310 USP35Q9P2H5 1018 aa28.91■■■□□ 2.22
SSNA1-201ENST00000322310 ATP7BP35670 1465 aa28.91■■■□□ 2.22
SSNA1-201ENST00000322310 ZC3H6P61129 1189 aaKnown RBP28.9■■■□□ 2.22
SSNA1-201ENST00000322310 DCAF11Q8TEB1 546 aa28.88■■■□□ 2.21
SSNA1-201ENST00000322310 NUDT16Q96DE0 195 aaKnown RBP28.88■■■□□ 2.21
SSNA1-201ENST00000322310 ITSN1Q15811 1721 aa28.86■■■□□ 2.21
SSNA1-201ENST00000322310 PARD3Q8TEW0 1356 aa28.86■■■□□ 2.21
SSNA1-201ENST00000322310 SSH2Q76I76 1423 aa28.84■■■□□ 2.21
SSNA1-201ENST00000322310 RREB1Q92766 1687 aa28.83■■■□□ 2.21
SSNA1-201ENST00000322310 ARHGEF28Q8N1W1 1705 aaKnown RBP28.83■■■□□ 2.21
SSNA1-201ENST00000322310 EVA1CP58658 441 aa28.82■■■□□ 2.2
SSNA1-201ENST00000322310 PDE3BQ13370 1112 aa28.82■■■□□ 2.2
SSNA1-201ENST00000322310 RAB3GAP2Q9H2M9 1393 aa28.82■■■□□ 2.2
SSNA1-201ENST00000322310 NUP188Q5SRE5 1749 aa28.81■■■□□ 2.2
SSNA1-201ENST00000322310 BARGINQ6ZT62 677 aa28.81■■■□□ 2.2
SSNA1-201ENST00000322310 LARP1Q6PKG0 1096 aaKnown RBP28.8■■■□□ 2.2
SSNA1-201ENST00000322310 CAMTA1Q9Y6Y1 1673 aa28.8■■■□□ 2.2
SSNA1-201ENST00000322310 CDK19Q9BWU1 502 aa28.79■■■□□ 2.2
SSNA1-201ENST00000322310 NRKQ7Z2Y5 1582 aa28.79■■■□□ 2.2
SSNA1-201ENST00000322310 POLR3AO14802 1390 aaPredicted RBP28.78■■■□□ 2.2
SSNA1-201ENST00000322310 ACEP12821 1306 aa28.78■■■□□ 2.2
SSNA1-201ENST00000322310 NBPF8Q3BBV2 869 aa28.76■■■□□ 2.19
SSNA1-201ENST00000322310 TOPAZ1Q8N9V7 1692 aa28.76■■■□□ 2.19
SSNA1-201ENST00000322310 YY1P25490 414 aa28.75■■■□□ 2.19
SSNA1-201ENST00000322310 NBPF14Q5TI25 921 aa28.75■■■□□ 2.19
SSNA1-201ENST00000322310 TCP11L2Q8N4U5 519 aa28.75■■■□□ 2.19
SSNA1-201ENST00000322310 LMO7Q8WWI1 1683 aa28.74■■■□□ 2.19
SSNA1-201ENST00000322310 ABTB2Q8N961 1025 aa28.73■■■□□ 2.19
SSNA1-201ENST00000322310 CCDC61Q9Y6R9 512 aa28.72■■■□□ 2.19
SSNA1-201ENST00000322310 CPDO75976 1380 aa28.72■■■□□ 2.19
SSNA1-201ENST00000322310 STAC3Q96MF2 364 aa28.71■■■□□ 2.19
SSNA1-201ENST00000322310 USP19O94966 1318 aa28.7■■■□□ 2.19
SSNA1-201ENST00000322310 PLEKHG3A1L390 1219 aa28.69■■■□□ 2.18
SSNA1-201ENST00000322310 SPON1Q9HCB6 807 aa28.68■■■□□ 2.18
SSNA1-201ENST00000322310 PPP1R1BQ9UD71 204 aaPredicted RBP28.68■■■□□ 2.18
SSNA1-201ENST00000322310 THRAP3Q9Y2W1 955 aaKnown RBP28.67■■■□□ 2.18
SSNA1-201ENST00000322310 COL5A2P05997 1499 aaPredicted RBP28.66■■■□□ 2.18
SSNA1-201ENST00000322310 PARP4Q9UKK3 1724 aaKnown RBP28.66■■■□□ 2.18
SSNA1-201ENST00000322310 KCNQ2O43526 872 aa28.65■■■□□ 2.18
SSNA1-201ENST00000322310 GCP02774 474 aa28.65■■■□□ 2.18
SSNA1-201ENST00000322310 NLRP13Q86W25 1043 aa28.62■■■□□ 2.17
SSNA1-201ENST00000322310 ZBTB7CA1YPR0 619 aa28.61■■■□□ 2.17
SSNA1-201ENST00000322310 OVOS2A0A0G2JMS6 1433 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 OVOS2A0A0J9YW53 1432 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 CRB1P82279 1406 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 OVOS2Q6IE36 1432 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 PEAK1Q9H792 1746 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 NINLQ9Y2I6 1382 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 PPIP5K1Q6PFW1 1433 aa28.6■■■□□ 2.17
SSNA1-201ENST00000322310 ANO8Q9HCE9 1232 aaPredicted RBP28.58■■■□□ 2.17
SSNA1-201ENST00000322310 SRPK2P78362 688 aaKnown RBP28.57■■■□□ 2.16
SSNA1-201ENST00000322310 LRRC37A3O60309 1634 aa28.57■■■□□ 2.16
SSNA1-201ENST00000322310 PTF1AQ7RTS3 328 aa28.56■■■□□ 2.16
SSNA1-201ENST00000322310 C11orf95C9JLR9 678 aaPredicted RBP28.55■■■□□ 2.16
SSNA1-201ENST00000322310 NBPF1Q3BBV0 1214 aa28.55■■■□□ 2.16
SSNA1-201ENST00000322310 CABP2Q9NPB3 220 aa28.55■■■□□ 2.16
SSNA1-201ENST00000322310 DCAF8L1A6NGE4 600 aa28.54■■■□□ 2.16
SSNA1-201ENST00000322310 RGPD3A6NKT7 1758 aaPredicted RBP28.54■■■□□ 2.16
SSNA1-201ENST00000322310 RGPD4Q7Z3J3 1758 aa28.54■■■□□ 2.16
SSNA1-201ENST00000322310 KIAA1210Q9ULL0 1709 aa28.53■■■□□ 2.16
SSNA1-201ENST00000322310 PLSCR1O15162 318 aa28.53■■■□□ 2.16
SSNA1-201ENST00000322310 DDB1Q16531 1140 aa28.53■■■□□ 2.16
SSNA1-201ENST00000322310 PDGFDQ9GZP0 370 aaPredicted RBP28.53■■■□□ 2.16
SSNA1-201ENST00000322310 SBF2Q86WG5 1849 aa28.53■■■□□ 2.16
SSNA1-201ENST00000322310 AATKQ6ZMQ8 1374 aa28.52■■■□□ 2.16
SSNA1-201ENST00000322310 NLRP6P59044 892 aa28.51■■■□□ 2.15
SSNA1-201ENST00000322310 TOM1L2Q6ZVM7 507 aa28.51■■■□□ 2.15
SSNA1-201ENST00000322310 CASZ1Q86V15 1759 aa28.51■■■□□ 2.15
SSNA1-201ENST00000322310 SLIT3O75094 1523 aa28.5■■■□□ 2.15
SSNA1-201ENST00000322310 BCL11BQ9C0K0 894 aaPredicted RBP28.49■■■□□ 2.15
SSNA1-201ENST00000322310 USP6P35125 1406 aa28.49■■■□□ 2.15
SSNA1-201ENST00000322310 CENPJQ9HC77 1338 aaPredicted RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms