RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 NSD2O96028 1365 aa24.86■■□□□ 1.57
FAM3A-201ENST00000322269 EDC4Q6P2E9 1401 aaKnown RBP24.85■■□□□ 1.57
FAM3A-201ENST00000322269 LRRC7Q96NW7 1537 aa24.85■■□□□ 1.57
FAM3A-201ENST00000322269 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
FAM3A-201ENST00000322269 PMFBP1Q8TBY8 1022 aa24.84■■□□□ 1.57
FAM3A-201ENST00000322269 DCCP43146 1447 aa24.84■■□□□ 1.57
FAM3A-201ENST00000322269 POLR3AO14802 1390 aaPredicted RBP24.83■■□□□ 1.57
FAM3A-201ENST00000322269 FYB1O15117 783 aa24.82■■□□□ 1.56
FAM3A-201ENST00000322269 ATF3P18847 181 aa24.82■■□□□ 1.56
FAM3A-201ENST00000322269 NGDNQ8NEJ9 315 aaKnown RBP24.82■■□□□ 1.56
FAM3A-201ENST00000322269 MSH6P52701 1360 aa24.81■■□□□ 1.56
FAM3A-201ENST00000322269 KIF20BQ96Q89 1820 aa24.81■■□□□ 1.56
FAM3A-201ENST00000322269 MORC1Q86VD1 984 aa24.8■■□□□ 1.56
FAM3A-201ENST00000322269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.8■■□□□ 1.56
FAM3A-201ENST00000322269 USP6P35125 1406 aa24.8■■□□□ 1.56
FAM3A-201ENST00000322269 PHF8Q9UPP1 1060 aa24.79■■□□□ 1.56
FAM3A-201ENST00000322269 RBM19Q9Y4C8 960 aaKnown RBP24.79■■□□□ 1.56
FAM3A-201ENST00000322269 NRKQ7Z2Y5 1582 aa24.79■■□□□ 1.56
FAM3A-201ENST00000322269 ESCO1Q5FWF5 840 aa24.79■■□□□ 1.56
FAM3A-201ENST00000322269 ANKRD26Q9UPS8 1709 aa24.79■■□□□ 1.56
FAM3A-201ENST00000322269 BLMP54132 1417 aaPredicted RBP24.78■■□□□ 1.56
FAM3A-201ENST00000322269 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
FAM3A-201ENST00000322269 GGNBP2Q9H3C7 697 aa24.78■■□□□ 1.56
FAM3A-201ENST00000322269 LTBP4Q8N2S1 1624 aa24.78■■□□□ 1.56
FAM3A-201ENST00000322269 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
FAM3A-201ENST00000322269 MST1RQ04912 1400 aa24.75■■□□□ 1.55
FAM3A-201ENST00000322269 TTC21BQ7Z4L5 1316 aa24.75■■□□□ 1.55
FAM3A-201ENST00000322269 SSH2Q76I76 1423 aa24.75■■□□□ 1.55
FAM3A-201ENST00000322269 PDE3BQ13370 1112 aa24.74■■□□□ 1.55
FAM3A-201ENST00000322269 ORAI2Q96SN7 254 aa24.74■■□□□ 1.55
FAM3A-201ENST00000322269 NME9Q86XW9 330 aa24.72■■□□□ 1.55
FAM3A-201ENST00000322269 TNNT2P45379 298 aaPredicted RBP24.72■■□□□ 1.55
FAM3A-201ENST00000322269 TTC21AQ8NDW8 1320 aa24.71■■□□□ 1.55
FAM3A-201ENST00000322269 B4GALNT3Q6L9W6 998 aa24.7■■□□□ 1.55
FAM3A-201ENST00000322269 KIF1AQ12756 1690 aa24.7■■□□□ 1.54
FAM3A-201ENST00000322269 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
FAM3A-201ENST00000322269 MYT1Q01538 1121 aa24.7■■□□□ 1.54
FAM3A-201ENST00000322269 ADAMTS8Q9UP79 889 aa24.69■■□□□ 1.54
FAM3A-201ENST00000322269 WDR43Q15061 677 aaKnown RBP eCLIP24.68■■□□□ 1.54
FAM3A-201ENST00000322269 PSME1Q06323 249 aa24.67■■□□□ 1.54
FAM3A-201ENST00000322269 COG3Q96JB2 828 aa24.67■■□□□ 1.54
FAM3A-201ENST00000322269 ZRANB1Q9UGI0 708 aa24.67■■□□□ 1.54
FAM3A-201ENST00000322269 FOXO3O43524 673 aa24.65■■□□□ 1.54
FAM3A-201ENST00000322269 OVOS2A0A0J9YW53 1432 aa24.63■■□□□ 1.53
FAM3A-201ENST00000322269 OVOS2Q6IE36 1432 aa24.63■■□□□ 1.53
FAM3A-201ENST00000322269 PIK3C2AO00443 1686 aa24.62■■□□□ 1.53
FAM3A-201ENST00000322269 PAK3O75914 559 aaPredicted RBP24.62■■□□□ 1.53
FAM3A-201ENST00000322269 MTHFSP49914 203 aa24.62■■□□□ 1.53
FAM3A-201ENST00000322269 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
FAM3A-201ENST00000322269 USP31Q70CQ4 1352 aa24.6■■□□□ 1.53
FAM3A-201ENST00000322269 RRP1P56182 461 aaKnown RBP24.59■■□□□ 1.53
FAM3A-201ENST00000322269 RCAN3Q9UKA8 241 aa24.59■■□□□ 1.53
FAM3A-201ENST00000322269 AATKQ6ZMQ8 1374 aa24.58■■□□□ 1.53
FAM3A-201ENST00000322269 ABTB2Q8N961 1025 aa24.58■■□□□ 1.53
FAM3A-201ENST00000322269 KRT28Q7Z3Y7 464 aa24.58■■□□□ 1.53
FAM3A-201ENST00000322269 CERKQ8TCT0 537 aa24.58■■□□□ 1.53
FAM3A-201ENST00000322269 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-201ENST00000322269 BRINP3Q76B58 766 aa24.57■■□□□ 1.52
FAM3A-201ENST00000322269 MAP2P11137 1827 aaKnown RBP24.57■■□□□ 1.52
FAM3A-201ENST00000322269 TRPM3Q9HCF6 1732 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-201ENST00000322269 NLRP6P59044 892 aa24.56■■□□□ 1.52
FAM3A-201ENST00000322269 SALL2Q9Y467 1007 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-201ENST00000322269 USP54Q70EL1 1684 aa24.56■■□□□ 1.52
FAM3A-201ENST00000322269 NPHP3Q7Z494 1330 aa24.56■■□□□ 1.52
FAM3A-201ENST00000322269 FBLN1P23142 703 aa24.56■■□□□ 1.52
FAM3A-201ENST00000322269 CFAP53Q96M91 514 aa24.56■■□□□ 1.52
FAM3A-201ENST00000322269 POLKQ9UBT6 870 aa24.55■■□□□ 1.52
FAM3A-201ENST00000322269 CCDC136Q96JN2 1154 aa24.54■■□□□ 1.52
FAM3A-201ENST00000322269 FANCIQ9NVI1 1328 aa24.54■■□□□ 1.52
FAM3A-201ENST00000322269 MARF1Q9Y4F3 1742 aaKnown RBP24.53■■□□□ 1.52
FAM3A-201ENST00000322269 NUTM2GQ5VZR2 741 aa24.53■■□□□ 1.52
FAM3A-201ENST00000322269 DDX17Q92841 729 aaKnown RBP24.52■■□□□ 1.52
FAM3A-201ENST00000322269 CDCA7LQ96GN5 454 aa24.52■■□□□ 1.52
FAM3A-201ENST00000322269 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
FAM3A-201ENST00000322269 IQSEC2Q5JU85 1478 aa24.51■■□□□ 1.51
FAM3A-201ENST00000322269 EMILIN1Q9Y6C2 1016 aa24.5■■□□□ 1.51
FAM3A-201ENST00000322269 PNPLA6Q8IY17 1366 aa24.49■■□□□ 1.51
FAM3A-201ENST00000322269 RRS1Q15050 365 aaKnown RBP24.49■■□□□ 1.51
FAM3A-201ENST00000322269 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
FAM3A-201ENST00000322269 PXDNQ92626 1479 aa24.49■■□□□ 1.51
FAM3A-201ENST00000322269 SBNO1A3KN83 1393 aa24.49■■□□□ 1.51
FAM3A-201ENST00000322269 PPM1GO15355 546 aaPredicted RBP24.49■■□□□ 1.51
FAM3A-201ENST00000322269 ZNF521Q96K83 1311 aa24.48■■□□□ 1.51
FAM3A-201ENST00000322269 ALS2Q96Q42 1657 aa24.48■■□□□ 1.51
FAM3A-201ENST00000322269 COL3A1P02461 1466 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-201ENST00000322269 SOX12O15370 315 aa24.47■■□□□ 1.51
FAM3A-201ENST00000322269 LMOD2Q6P5Q4 547 aa24.47■■□□□ 1.51
FAM3A-201ENST00000322269 ANP32EQ9BTT0 268 aa24.46■■□□□ 1.51
FAM3A-201ENST00000322269 CDK12Q9NYV4 1490 aaPredicted RBP24.46■■□□□ 1.51
FAM3A-201ENST00000322269 UBAP1LF5GYI3 381 aa24.45■■□□□ 1.5
FAM3A-201ENST00000322269 TOM1O60784 492 aa24.45■■□□□ 1.5
FAM3A-201ENST00000322269 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
FAM3A-201ENST00000322269 NHSL1Q5SYE7 1610 aa24.43■■□□□ 1.5
FAM3A-201ENST00000322269 SOS2Q07890 1332 aaPredicted RBP24.43■■□□□ 1.5
FAM3A-201ENST00000322269 DIAPH1O60610 1272 aaKnown RBP24.42■■□□□ 1.5
FAM3A-201ENST00000322269 CCDC146Q8IYE0 955 aa24.42■■□□□ 1.5
FAM3A-201ENST00000322269 KCNH5Q8NCM2 988 aa24.42■■□□□ 1.5
FAM3A-201ENST00000322269 SPATA31A3Q5VYP0 1347 aa24.42■■□□□ 1.5
FAM3A-201ENST00000322269 APAF1O14727 1248 aa24.41■■□□□ 1.5
FAM3A-201ENST00000322269 EXOC6Q8TAG9 804 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms