RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
SFXN1-201ENST00000321442 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
SFXN1-201ENST00000321442 CDC45O75419 566 aa20.06■□□□□ 0.8
SFXN1-201ENST00000321442 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
SFXN1-201ENST00000321442 CCDC61Q9Y6R9 512 aa20.06■□□□□ 0.8
SFXN1-201ENST00000321442 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
SFXN1-201ENST00000321442 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
SFXN1-201ENST00000321442 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
SFXN1-201ENST00000321442 SYTL4Q96C24 671 aaPredicted RBP20.05■□□□□ 0.8
SFXN1-201ENST00000321442 FOXO3O43524 673 aa20.05■□□□□ 0.8
SFXN1-201ENST00000321442 BCL11BQ9C0K0 894 aaPredicted RBP20.05■□□□□ 0.8
SFXN1-201ENST00000321442 EVA1CP58658 441 aa20.05■□□□□ 0.8
SFXN1-201ENST00000321442 PZPP20742 1482 aa20.05■□□□□ 0.8
SFXN1-201ENST00000321442 A2MP01023 1474 aa20.04■□□□□ 0.8
SFXN1-201ENST00000321442 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
SFXN1-201ENST00000321442 C14orf93Q9H972 538 aaKnown RBP20.04■□□□□ 0.8
SFXN1-201ENST00000321442 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
SFXN1-201ENST00000321442 RPGRIP1LQ68CZ1 1315 aa20.04■□□□□ 0.8
SFXN1-201ENST00000321442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.04■□□□□ 0.8
SFXN1-201ENST00000321442 RARSP54136 660 aaKnown RBP20.04■□□□□ 0.8
SFXN1-201ENST00000321442 NEK4P51957 841 aa20.03■□□□□ 0.8
SFXN1-201ENST00000321442 MIS18AQ9NYP9 233 aa20.03■□□□□ 0.8
SFXN1-201ENST00000321442 TESK2Q96S53 571 aa20.02■□□□□ 0.79
SFXN1-201ENST00000321442 C8orf34Q49A92 452 aa20.01■□□□□ 0.79
SFXN1-201ENST00000321442 ZRANB1Q9UGI0 708 aa20.01■□□□□ 0.79
SFXN1-201ENST00000321442 GNAI1P63096 354 aa20.01■□□□□ 0.79
SFXN1-201ENST00000321442 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
SFXN1-201ENST00000321442 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
SFXN1-201ENST00000321442 PKNOX2Q96KN3 472 aa20■□□□□ 0.79
SFXN1-201ENST00000321442 WDR63Q8IWG1 891 aa20■□□□□ 0.79
SFXN1-201ENST00000321442 TMEM57Q8N5G2 664 aa20■□□□□ 0.79
SFXN1-201ENST00000321442 KDM6BO15054 1643 aa19.99■□□□□ 0.79
SFXN1-201ENST00000321442 USHBP1Q8N6Y0 703 aa19.99■□□□□ 0.79
SFXN1-201ENST00000321442 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
SFXN1-201ENST00000321442 HSP90B1P14625 803 aaKnown RBP19.98■□□□□ 0.79
SFXN1-201ENST00000321442 K7ELQ4 463 aaPredicted RBP19.98■□□□□ 0.79
SFXN1-201ENST00000321442 FKBP5Q13451 457 aaPredicted RBP19.98■□□□□ 0.79
SFXN1-201ENST00000321442 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
SFXN1-201ENST00000321442 ZNF592Q92610 1267 aa19.98■□□□□ 0.79
SFXN1-201ENST00000321442 STRN4Q9NRL3 753 aa19.98■□□□□ 0.79
SFXN1-201ENST00000321442 VPS37CA5D8V6 355 aaPredicted RBP19.97■□□□□ 0.79
SFXN1-201ENST00000321442 AIMP1Q12904 312 aaKnown RBP19.97■□□□□ 0.79
SFXN1-201ENST00000321442 LRPPRCP42704 1394 aaKnown RBP19.97■□□□□ 0.79
SFXN1-201ENST00000321442 SEC24BO95487 1268 aa19.97■□□□□ 0.79
SFXN1-201ENST00000321442 SSH1Q8WYL5 1049 aa19.97■□□□□ 0.79
SFXN1-201ENST00000321442 ITSN2Q9NZM3 1697 aa19.96■□□□□ 0.79
SFXN1-201ENST00000321442 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
SFXN1-201ENST00000321442 CSPP1Q1MSJ5 1256 aa19.96■□□□□ 0.79
SFXN1-201ENST00000321442 CCDC173Q0VFZ6 552 aa19.95■□□□□ 0.78
SFXN1-201ENST00000321442 PCDHB15Q9Y5E8 787 aa19.95■□□□□ 0.78
SFXN1-201ENST00000321442 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
SFXN1-201ENST00000321442 PRAG1Q86YV5 1406 aa19.94■□□□□ 0.78
SFXN1-201ENST00000321442 HSPA2P54652 639 aa19.94■□□□□ 0.78
SFXN1-201ENST00000321442 ATP6V1DQ9Y5K8 247 aa19.94■□□□□ 0.78
SFXN1-201ENST00000321442 DUOX2Q9NRD8 1548 aa19.94■□□□□ 0.78
SFXN1-201ENST00000321442 WASLO00401 505 aaPredicted RBP19.94■□□□□ 0.78
SFXN1-201ENST00000321442 RABEP1Q15276 862 aa19.93■□□□□ 0.78
SFXN1-201ENST00000321442 DIAPH3Q9NSV4 1193 aa19.93■□□□□ 0.78
SFXN1-201ENST00000321442 NKTRP30414 1462 aaKnown RBP19.93■□□□□ 0.78
SFXN1-201ENST00000321442 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
SFXN1-201ENST00000321442 CCDC27Q2M243 656 aa19.92■□□□□ 0.78
SFXN1-201ENST00000321442 RAPGEF4Q8WZA2 1011 aa19.92■□□□□ 0.78
SFXN1-201ENST00000321442 CARD14Q9BXL6 1004 aa19.92■□□□□ 0.78
SFXN1-201ENST00000321442 HTATSF1O43719 755 aaKnown RBP19.92■□□□□ 0.78
SFXN1-201ENST00000321442 XRCC6P12956 609 aaKnown RBP eCLIP19.92■□□□□ 0.78
SFXN1-201ENST00000321442 GNL2Q13823 731 aaKnown RBP19.92■□□□□ 0.78
SFXN1-201ENST00000321442 MCM10Q7L590 875 aa19.92■□□□□ 0.78
SFXN1-201ENST00000321442 GCC1Q96CN9 775 aa19.92■□□□□ 0.78
SFXN1-201ENST00000321442 DNMT1P26358 1616 aaKnown RBP19.92■□□□□ 0.78
SFXN1-201ENST00000321442 GPATCH3Q96I76 525 aa19.91■□□□□ 0.78
SFXN1-201ENST00000321442 TBC1D32Q96NH3 1257 aa19.91■□□□□ 0.78
SFXN1-201ENST00000321442 TPM2P07951 284 aa19.91■□□□□ 0.78
SFXN1-201ENST00000321442 TNPO1Q92973 898 aaKnown RBP19.91■□□□□ 0.78
SFXN1-201ENST00000321442 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
SFXN1-201ENST00000321442 SMC3Q9UQE7 1217 aa19.9■□□□□ 0.78
SFXN1-201ENST00000321442 SCAF11Q99590 1463 aaKnown RBP19.9■□□□□ 0.78
SFXN1-201ENST00000321442 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.78
SFXN1-201ENST00000321442 GPRASP1Q5JY77 1395 aa19.89■□□□□ 0.78
SFXN1-201ENST00000321442 BECN2A8MW95 431 aa19.89■□□□□ 0.77
SFXN1-201ENST00000321442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.77
SFXN1-201ENST00000321442 NINLQ9Y2I6 1382 aa19.89■□□□□ 0.77
SFXN1-201ENST00000321442 ZNF692Q9BU19 519 aaPredicted RBP19.89■□□□□ 0.77
SFXN1-201ENST00000321442 ISY1Q9ULR0 285 aaKnown RBP19.89■□□□□ 0.77
SFXN1-201ENST00000321442 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
SFXN1-201ENST00000321442 SSFA2P28290 1259 aa19.88■□□□□ 0.77
SFXN1-201ENST00000321442 GOLGA6L19H0YKK7 550 aa19.88■□□□□ 0.77
SFXN1-201ENST00000321442 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
SFXN1-201ENST00000321442 TRIM27P14373 513 aa19.88■□□□□ 0.77
SFXN1-201ENST00000321442 CCDC39Q9UFE4 941 aa19.88■□□□□ 0.77
SFXN1-201ENST00000321442 MBD5Q9P267 1494 aa19.88■□□□□ 0.77
SFXN1-201ENST00000321442 H3BQV1 296 aa19.87■□□□□ 0.77
SFXN1-201ENST00000321442 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
SFXN1-201ENST00000321442 ABCC10Q5T3U5 1492 aa19.87■□□□□ 0.77
SFXN1-201ENST00000321442 FIBPO43427 364 aa19.87■□□□□ 0.77
SFXN1-201ENST00000321442 RRP9O43818 475 aaKnown RBP19.87■□□□□ 0.77
SFXN1-201ENST00000321442 CIZ1Q9ULV3 898 aaPredicted RBP19.87■□□□□ 0.77
SFXN1-201ENST00000321442 FAM83GA6ND36 823 aa19.87■□□□□ 0.77
SFXN1-201ENST00000321442 FBXW7Q969H0 707 aa19.87■□□□□ 0.77
SFXN1-201ENST00000321442 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
SFXN1-201ENST00000321442 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms