RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 CCDC66A2RUB6 948 aa16.86■□□□□ 0.29
RAPH1-202ENST00000319170 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
RAPH1-202ENST00000319170 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
RAPH1-202ENST00000319170 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
RAPH1-202ENST00000319170 TTC39AQ5SRH9 613 aa16.86■□□□□ 0.29
RAPH1-202ENST00000319170 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
RAPH1-202ENST00000319170 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
RAPH1-202ENST00000319170 SMG6Q86US8 1419 aaKnown RBP16.85■□□□□ 0.29
RAPH1-202ENST00000319170 ANKRD62A6NC57 917 aa16.84■□□□□ 0.29
RAPH1-202ENST00000319170 TRAK2O60296 914 aa16.84■□□□□ 0.29
RAPH1-202ENST00000319170 ATF3P18847 181 aa16.84■□□□□ 0.29
RAPH1-202ENST00000319170 HSP90AB3PQ58FF7 597 aa16.84■□□□□ 0.29
RAPH1-202ENST00000319170 HIP1O00291 1037 aa16.84■□□□□ 0.29
RAPH1-202ENST00000319170 ZNHIT6Q9NWK9 470 aaKnown RBP16.84■□□□□ 0.29
RAPH1-202ENST00000319170 ARHGAP5Q13017 1502 aa16.83■□□□□ 0.28
RAPH1-202ENST00000319170 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.28
RAPH1-202ENST00000319170 SERPINC1P01008 464 aa16.83■□□□□ 0.28
RAPH1-202ENST00000319170 ATP2B2Q01814 1243 aa16.82■□□□□ 0.28
RAPH1-202ENST00000319170 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
RAPH1-202ENST00000319170 CENPHQ9H3R5 247 aa16.82■□□□□ 0.28
RAPH1-202ENST00000319170 STK11IPQ8N1F8 1099 aa16.82■□□□□ 0.28
RAPH1-202ENST00000319170 KIAA0754O94854 1291 aa16.82■□□□□ 0.28
RAPH1-202ENST00000319170 RBM10P98175 930 aaKnown RBP16.82■□□□□ 0.28
RAPH1-202ENST00000319170 FIBPO43427 364 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 DEF6Q9H4E7 631 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 PDCP20941 246 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 CCDC181Q5TID7 509 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 STK38Q15208 465 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
RAPH1-202ENST00000319170 CABP2Q9NPB3 220 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 AAMPQ13685 434 aa16.81■□□□□ 0.28
RAPH1-202ENST00000319170 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
RAPH1-202ENST00000319170 PPFIBP1Q86W92 1011 aa16.8■□□□□ 0.28
RAPH1-202ENST00000319170 MBD3O95983 291 aa16.8■□□□□ 0.28
RAPH1-202ENST00000319170 STK3Q13188 491 aa16.8■□□□□ 0.28
RAPH1-202ENST00000319170 STIM1Q13586 685 aa16.8■□□□□ 0.28
RAPH1-202ENST00000319170 NEK4P51957 841 aa16.8■□□□□ 0.28
RAPH1-202ENST00000319170 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
RAPH1-202ENST00000319170 FAM193AP78312 1265 aa16.79■□□□□ 0.28
RAPH1-202ENST00000319170 TNMDQ9H2S6 317 aa16.79■□□□□ 0.28
RAPH1-202ENST00000319170 WASHC2AQ641Q2 1341 aa16.79■□□□□ 0.28
RAPH1-202ENST00000319170 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
RAPH1-202ENST00000319170 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
RAPH1-202ENST00000319170 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
RAPH1-202ENST00000319170 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
RAPH1-202ENST00000319170 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
RAPH1-202ENST00000319170 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
RAPH1-202ENST00000319170 CNNM1Q9NRU3 951 aa16.78■□□□□ 0.28
RAPH1-202ENST00000319170 SURF6O75683 361 aaKnown RBP16.78■□□□□ 0.28
RAPH1-202ENST00000319170 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.77■□□□□ 0.28
RAPH1-202ENST00000319170 LUC7LQ9NQ29 371 aaKnown RBP16.77■□□□□ 0.28
RAPH1-202ENST00000319170 CCDC7Q96M83 1385 aa16.77■□□□□ 0.28
RAPH1-202ENST00000319170 ERC1Q8IUD2 1116 aa16.77■□□□□ 0.28
RAPH1-202ENST00000319170 CCDC69A6NI79 296 aa16.77■□□□□ 0.28
RAPH1-202ENST00000319170 SEPT11Q9NVA2 429 aaKnown RBP16.77■□□□□ 0.28
RAPH1-202ENST00000319170 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.27
RAPH1-202ENST00000319170 CCDC192P0DO97 292 aa16.77■□□□□ 0.27
RAPH1-202ENST00000319170 MCM2P49736 904 aa16.77■□□□□ 0.27
RAPH1-202ENST00000319170 FAM177A1Q8N128 213 aaPredicted RBP16.77■□□□□ 0.27
RAPH1-202ENST00000319170 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
RAPH1-202ENST00000319170 RABEP1Q15276 862 aa16.76■□□□□ 0.27
RAPH1-202ENST00000319170 GNL3LQ9NVN8 582 aaKnown RBP16.76■□□□□ 0.27
RAPH1-202ENST00000319170 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
RAPH1-202ENST00000319170 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
RAPH1-202ENST00000319170 ME1P48163 572 aa16.76■□□□□ 0.27
RAPH1-202ENST00000319170 MATR3P43243 847 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■■□□ 18.3
RAPH1-202ENST00000319170 TXLNBQ8N3L3 684 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 JMYQ8N9B5 988 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 TAX1BP1Q86VP1 789 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 GOLGA6L7A0A1B0GV03 622 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
RAPH1-202ENST00000319170 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
RAPH1-202ENST00000319170 GNAI2P04899 355 aa16.74■□□□□ 0.27
RAPH1-202ENST00000319170 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
RAPH1-202ENST00000319170 KIF21BO75037 1637 aa16.74■□□□□ 0.27
RAPH1-202ENST00000319170 GNAI3P08754 354 aa16.74■□□□□ 0.27
RAPH1-202ENST00000319170 FYCO1Q9BQS8 1478 aa16.74■□□□□ 0.27
RAPH1-202ENST00000319170 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 HMGN5P82970 282 aaKnown RBP16.73■□□□□ 0.27
RAPH1-202ENST00000319170 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
RAPH1-202ENST00000319170 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 AEBP1Q8IUX7 1158 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 SIL1Q9H173 461 aa16.73■□□□□ 0.27
RAPH1-202ENST00000319170 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
RAPH1-202ENST00000319170 ABTB2Q8N961 1025 aa16.72■□□□□ 0.27
RAPH1-202ENST00000319170 PTPRGP23470 1445 aa16.72■□□□□ 0.27
RAPH1-202ENST00000319170 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
RAPH1-202ENST00000319170 UQCRHLA0A096LP55 91 aa16.72■□□□□ 0.27
RAPH1-202ENST00000319170 UQCRHP07919 91 aa16.72■□□□□ 0.27
RAPH1-202ENST00000319170 CBFA2T2O43439 604 aa16.71■□□□□ 0.27
RAPH1-202ENST00000319170 EIF3JO75822 258 aaKnown RBP16.71■□□□□ 0.27
RAPH1-202ENST00000319170 NUP133Q8WUM0 1156 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms