RNA–Protein interactions for RNA: ENST00000316891.9

TRIT1-201, Transcript of tRNA isopentenyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIT1, Length 2,112 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-201ENST00000316891 C1orf167Q5SNV9 1468 aa17.2■□□□□ 0.34
TRIT1-201ENST00000316891 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
TRIT1-201ENST00000316891 NME9Q86XW9 330 aa17.18■□□□□ 0.34
TRIT1-201ENST00000316891 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
TRIT1-201ENST00000316891 KIF1AQ12756 1690 aa17.17■□□□□ 0.34
TRIT1-201ENST00000316891 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
TRIT1-201ENST00000316891 MSH6P52701 1360 aa17.17■□□□□ 0.34
TRIT1-201ENST00000316891 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
TRIT1-201ENST00000316891 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
TRIT1-201ENST00000316891 ATF3P18847 181 aa17.16■□□□□ 0.34
TRIT1-201ENST00000316891 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
TRIT1-201ENST00000316891 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
TRIT1-201ENST00000316891 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
TRIT1-201ENST00000316891 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
TRIT1-201ENST00000316891 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
TRIT1-201ENST00000316891 USP54Q70EL1 1684 aa17.15■□□□□ 0.34
TRIT1-201ENST00000316891 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
TRIT1-201ENST00000316891 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
TRIT1-201ENST00000316891 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
TRIT1-201ENST00000316891 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
TRIT1-201ENST00000316891 LTBP4Q8N2S1 1624 aa17.13■□□□□ 0.33
TRIT1-201ENST00000316891 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
TRIT1-201ENST00000316891 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
TRIT1-201ENST00000316891 INSRP06213 1382 aa17.12■□□□□ 0.33
TRIT1-201ENST00000316891 AATKQ6ZMQ8 1374 aa17.12■□□□□ 0.33
TRIT1-201ENST00000316891 MTHFSP49914 203 aa17.12■□□□□ 0.33
TRIT1-201ENST00000316891 COG3Q96JB2 828 aa17.12■□□□□ 0.33
TRIT1-201ENST00000316891 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
TRIT1-201ENST00000316891 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
TRIT1-201ENST00000316891 SMG6Q86US8 1419 aaKnown RBP17.11■□□□□ 0.33
TRIT1-201ENST00000316891 COL3A1P02461 1466 aaPredicted RBP17.1■□□□□ 0.33
TRIT1-201ENST00000316891 PNPLA6Q8IY17 1366 aa17.09■□□□□ 0.33
TRIT1-201ENST00000316891 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.33
TRIT1-201ENST00000316891 FOXO3O43524 673 aa17.08■□□□□ 0.33
TRIT1-201ENST00000316891 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRIT1-201ENST00000316891 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
TRIT1-201ENST00000316891 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
TRIT1-201ENST00000316891 FBLN1P23142 703 aa17.07■□□□□ 0.32
TRIT1-201ENST00000316891 PSME1Q06323 249 aa17.07■□□□□ 0.32
TRIT1-201ENST00000316891 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
TRIT1-201ENST00000316891 CDK12Q9NYV4 1490 aaPredicted RBP17.05■□□□□ 0.32
TRIT1-201ENST00000316891 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
TRIT1-201ENST00000316891 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
TRIT1-201ENST00000316891 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIT1-201ENST00000316891 ABTB2Q8N961 1025 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 PXDNQ92626 1479 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
TRIT1-201ENST00000316891 NLRP6P59044 892 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 PEAK1Q9H792 1746 aa17.03■□□□□ 0.32
TRIT1-201ENST00000316891 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
TRIT1-201ENST00000316891 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.31
TRIT1-201ENST00000316891 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
TRIT1-201ENST00000316891 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
TRIT1-201ENST00000316891 SBNO1A3KN83 1393 aa17■□□□□ 0.31
TRIT1-201ENST00000316891 NFAT5O94916 1531 aa17■□□□□ 0.31
TRIT1-201ENST00000316891 SLIT3O75094 1523 aa17■□□□□ 0.31
TRIT1-201ENST00000316891 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
TRIT1-201ENST00000316891 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
TRIT1-201ENST00000316891 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
TRIT1-201ENST00000316891 USP19O94966 1318 aa16.97■□□□□ 0.31
TRIT1-201ENST00000316891 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
TRIT1-201ENST00000316891 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
TRIT1-201ENST00000316891 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
TRIT1-201ENST00000316891 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
TRIT1-201ENST00000316891 TNS3Q68CZ2 1445 aa16.96■□□□□ 0.31
TRIT1-201ENST00000316891 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
TRIT1-201ENST00000316891 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
TRIT1-201ENST00000316891 LTN1O94822 1766 aa16.96■□□□□ 0.3
TRIT1-201ENST00000316891 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
TRIT1-201ENST00000316891 SOS2Q07890 1332 aaPredicted RBP16.95■□□□□ 0.3
TRIT1-201ENST00000316891 SOX12O15370 315 aa16.95■□□□□ 0.3
TRIT1-201ENST00000316891 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
TRIT1-201ENST00000316891 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
TRIT1-201ENST00000316891 IL13P35225 146 aa16.94■□□□□ 0.3
TRIT1-201ENST00000316891 FLT4P35916 1363 aa16.94■□□□□ 0.3
TRIT1-201ENST00000316891 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
TRIT1-201ENST00000316891 MYT1Q01538 1121 aa16.94■□□□□ 0.3
TRIT1-201ENST00000316891 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
TRIT1-201ENST00000316891 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
TRIT1-201ENST00000316891 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
TRIT1-201ENST00000316891 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
TRIT1-201ENST00000316891 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRIT1-201ENST00000316891 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
TRIT1-201ENST00000316891 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
TRIT1-201ENST00000316891 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
TRIT1-201ENST00000316891 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
TRIT1-201ENST00000316891 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
TRIT1-201ENST00000316891 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
TRIT1-201ENST00000316891 ARHGEF10O15013 1369 aa16.91■□□□□ 0.3
TRIT1-201ENST00000316891 GCP02774 474 aa16.9■□□□□ 0.3
TRIT1-201ENST00000316891 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
TRIT1-201ENST00000316891 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
TRIT1-201ENST00000316891 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
TRIT1-201ENST00000316891 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
TRIT1-201ENST00000316891 HOXC9P31274 260 aa16.89■□□□□ 0.29
TRIT1-201ENST00000316891 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms