RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 ST20-MTHFSA0A0A6YYL1 179 aa25.61■■□□□ 1.69
KLHDC4-202ENST00000316853 USP21Q9UK80 565 aa25.61■■□□□ 1.69
KLHDC4-202ENST00000316853 QTRT2Q9H974 415 aaKnown RBP25.6■■□□□ 1.69
KLHDC4-202ENST00000316853 NUTM2GQ5VZR2 741 aa25.59■■□□□ 1.69
KLHDC4-202ENST00000316853 FNBP4Q8N3X1 1017 aaPredicted RBP25.59■■□□□ 1.69
KLHDC4-202ENST00000316853 RXRBP28702 533 aa25.58■■□□□ 1.69
KLHDC4-202ENST00000316853 ATAD2Q6PL18 1390 aa25.57■■□□□ 1.68
KLHDC4-202ENST00000316853 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
KLHDC4-202ENST00000316853 USP47Q96K76 1375 aa25.56■■□□□ 1.68
KLHDC4-202ENST00000316853 AKAP12Q02952 1782 aa25.56■■□□□ 1.68
KLHDC4-202ENST00000316853 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
KLHDC4-202ENST00000316853 TESK2Q96S53 571 aa25.54■■□□□ 1.68
KLHDC4-202ENST00000316853 USP6P35125 1406 aa25.54■■□□□ 1.68
KLHDC4-202ENST00000316853 PLCH1Q4KWH8 1693 aa25.53■■□□□ 1.68
KLHDC4-202ENST00000316853 BCL9LQ86UU0 1499 aa25.53■■□□□ 1.68
KLHDC4-202ENST00000316853 TMC1Q8TDI8 760 aa25.52■■□□□ 1.68
KLHDC4-202ENST00000316853 TRPC5Q9UL62 973 aaPredicted RBP25.52■■□□□ 1.68
KLHDC4-202ENST00000316853 PHRF1Q9P1Y6 1649 aaKnown RBP25.52■■□□□ 1.68
KLHDC4-202ENST00000316853 RBM6P78332 1123 aaKnown RBP25.51■■□□□ 1.67
KLHDC4-202ENST00000316853 FAM83GA6ND36 823 aa25.5■■□□□ 1.67
KLHDC4-202ENST00000316853 SLIT2O94813 1529 aa25.5■■□□□ 1.67
KLHDC4-202ENST00000316853 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
KLHDC4-202ENST00000316853 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
KLHDC4-202ENST00000316853 BRD4O60885 1362 aaPredicted RBP25.49■■□□□ 1.67
KLHDC4-202ENST00000316853 SLC24A1O60721 1099 aa25.48■■□□□ 1.67
KLHDC4-202ENST00000316853 UNC5CLQ8IV45 518 aa25.48■■□□□ 1.67
KLHDC4-202ENST00000316853 NWD2Q9ULI1 1742 aa25.48■■□□□ 1.67
KLHDC4-202ENST00000316853 ATRNO75882 1429 aa25.47■■□□□ 1.67
KLHDC4-202ENST00000316853 KTN1Q86UP2 1357 aaKnown RBP25.47■■□□□ 1.67
KLHDC4-202ENST00000316853 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
KLHDC4-202ENST00000316853 SLC12A5Q9H2X9 1139 aa25.47■■□□□ 1.67
KLHDC4-202ENST00000316853 COL14A1Q05707 1796 aaKnown RBP25.46■■□□□ 1.67
KLHDC4-202ENST00000316853 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
KLHDC4-202ENST00000316853 CPSF1Q10570 1443 aaKnown RBP25.46■■□□□ 1.67
KLHDC4-202ENST00000316853 ZC3H6P61129 1189 aaKnown RBP25.45■■□□□ 1.66
KLHDC4-202ENST00000316853 PUS7Q96PZ0 661 aaKnown RBP25.45■■□□□ 1.66
KLHDC4-202ENST00000316853 PIK3C2AO00443 1686 aa25.45■■□□□ 1.66
KLHDC4-202ENST00000316853 SSH2Q76I76 1423 aa25.45■■□□□ 1.66
KLHDC4-202ENST00000316853 NLRP6P59044 892 aa25.44■■□□□ 1.66
KLHDC4-202ENST00000316853 TMF1P82094 1093 aa25.44■■□□□ 1.66
KLHDC4-202ENST00000316853 PRDM11Q9NQV5 511 aa25.44■■□□□ 1.66
KLHDC4-202ENST00000316853 TTC21BQ7Z4L5 1316 aa25.43■■□□□ 1.66
KLHDC4-202ENST00000316853 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
KLHDC4-202ENST00000316853 BTG4Q9NY30 223 aa25.43■■□□□ 1.66
KLHDC4-202ENST00000316853 NRKQ7Z2Y5 1582 aa25.43■■□□□ 1.66
KLHDC4-202ENST00000316853 KIAA0232Q92628 1395 aa25.43■■□□□ 1.66
KLHDC4-202ENST00000316853 HDGFL2Q7Z4V5 671 aaPredicted RBP25.42■■□□□ 1.66
KLHDC4-202ENST00000316853 CD163L1Q9NR16 1453 aa25.41■■□□□ 1.66
KLHDC4-202ENST00000316853 USP19O94966 1318 aa25.41■■□□□ 1.66
KLHDC4-202ENST00000316853 RGS12O14924 1447 aa25.41■■□□□ 1.66
KLHDC4-202ENST00000316853 CHRNA2Q15822 529 aa25.41■■□□□ 1.66
KLHDC4-202ENST00000316853 GJD4Q96KN9 370 aaPredicted RBP25.41■■□□□ 1.66
KLHDC4-202ENST00000316853 CCDC9Q9Y3X0 531 aaKnown RBP25.41■■□□□ 1.66
KLHDC4-202ENST00000316853 NRAPQ86VF7 1730 aa25.4■■□□□ 1.66
KLHDC4-202ENST00000316853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.4■■□□□ 1.66
KLHDC4-202ENST00000316853 TERF2IPQ9NYB0 399 aa25.4■■□□□ 1.66
KLHDC4-202ENST00000316853 GCP02774 474 aa25.39■■□□□ 1.66
KLHDC4-202ENST00000316853 TTC21AQ8NDW8 1320 aa25.38■■□□□ 1.65
KLHDC4-202ENST00000316853 GLI3P10071 1580 aa25.36■■□□□ 1.65
KLHDC4-202ENST00000316853 A0A1W2PP64 1363 aa25.36■■□□□ 1.65
KLHDC4-202ENST00000316853 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
KLHDC4-202ENST00000316853 VPS72Q15906 364 aa25.36■■□□□ 1.65
KLHDC4-202ENST00000316853 NINLQ9Y2I6 1382 aa25.35■■□□□ 1.65
KLHDC4-202ENST00000316853 CDCA8Q53HL2 280 aa25.35■■□□□ 1.65
KLHDC4-202ENST00000316853 EIF4G2P78344 907 aaKnown RBP eCLIP25.34■■□□□ 1.653e-8■■■■■ 56.5
KLHDC4-202ENST00000316853 SLIT3O75094 1523 aa25.33■■□□□ 1.65
KLHDC4-202ENST00000316853 SOX12O15370 315 aa25.33■■□□□ 1.65
KLHDC4-202ENST00000316853 ZRANB1Q9UGI0 708 aa25.33■■□□□ 1.65
KLHDC4-202ENST00000316853 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
KLHDC4-202ENST00000316853 HSPA5P11021 654 aaKnown RBP25.32■■□□□ 1.64
KLHDC4-202ENST00000316853 NME9Q86XW9 330 aa25.32■■□□□ 1.64
KLHDC4-202ENST00000316853 STRN4Q9NRL3 753 aa25.32■■□□□ 1.64
KLHDC4-202ENST00000316853 CPDO75976 1380 aa25.31■■□□□ 1.64
KLHDC4-202ENST00000316853 EVA1CP58658 441 aa25.29■■□□□ 1.64
KLHDC4-202ENST00000316853 BRWD3Q6RI45 1802 aa25.28■■□□□ 1.64
KLHDC4-202ENST00000316853 KCNH5Q8NCM2 988 aa25.28■■□□□ 1.64
KLHDC4-202ENST00000316853 POLR3GLQ9BT43 218 aa25.28■■□□□ 1.64
KLHDC4-202ENST00000316853 LMO7Q8WWI1 1683 aa25.28■■□□□ 1.64
KLHDC4-202ENST00000316853 CAMTA1Q9Y6Y1 1673 aa25.28■■□□□ 1.64
KLHDC4-202ENST00000316853 ANKRD36BQ8N2N9 1353 aa25.27■■□□□ 1.64
KLHDC4-202ENST00000316853 MYOM1P52179 1685 aa25.26■■□□□ 1.63
KLHDC4-202ENST00000316853 USP54Q70EL1 1684 aa25.26■■□□□ 1.63
KLHDC4-202ENST00000316853 RGPD5Q99666 1765 aa25.26■■□□□ 1.63
KLHDC4-202ENST00000316853 A0A0G2JS52 829 aa25.25■■□□□ 1.63
KLHDC4-202ENST00000316853 MYT1Q01538 1121 aa25.25■■□□□ 1.63
KLHDC4-202ENST00000316853 SPATA31A5Q5VU36 1347 aa25.25■■□□□ 1.63
KLHDC4-202ENST00000316853 SPATA31A7Q8IWB4 1347 aa25.25■■□□□ 1.63
KLHDC4-202ENST00000316853 USP31Q70CQ4 1352 aa25.25■■□□□ 1.63
KLHDC4-202ENST00000316853 FAM98CQ17RN3 349 aaKnown RBP25.24■■□□□ 1.63
KLHDC4-202ENST00000316853 SEPT12Q8IYM1 358 aa25.24■■□□□ 1.63
KLHDC4-202ENST00000316853 COL18A1P39060 1754 aa25.23■■□□□ 1.63
KLHDC4-202ENST00000316853 NFAT5O94916 1531 aa25.22■■□□□ 1.63
KLHDC4-202ENST00000316853 UPF1Q92900 1129 aaKnown RBP eCLIP25.22■■□□□ 1.63
KLHDC4-202ENST00000316853 USP35Q9P2H5 1018 aa25.22■■□□□ 1.63
KLHDC4-202ENST00000316853 LTN1O94822 1766 aa25.21■■□□□ 1.63
KLHDC4-202ENST00000316853 AATKQ6ZMQ8 1374 aa25.21■■□□□ 1.63
KLHDC4-202ENST00000316853 ONECUT3O60422 494 aaPredicted RBP25.21■■□□□ 1.63
KLHDC4-202ENST00000316853 LARP1Q6PKG0 1096 aaKnown RBP25.21■■□□□ 1.63
KLHDC4-202ENST00000316853 ARHGEF25Q86VW2 580 aa25.21■■□□□ 1.63
KLHDC4-202ENST00000316853 SPATA31A1Q5TZJ5 1347 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms