RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ABCC11Q96J66 1382 aa14.89□□□□□ -0.03
LDLRAD3-201ENST00000315571 TMC1Q8TDI8 760 aa14.89□□□□□ -0.03
LDLRAD3-201ENST00000315571 AMOTL2Q9Y2J4 779 aa14.89□□□□□ -0.03
LDLRAD3-201ENST00000315571 VGLL3A8MV65 326 aa14.88□□□□□ -0.03
LDLRAD3-201ENST00000315571 POLR1AO95602 1720 aaPredicted RBP14.87□□□□□ -0.03
LDLRAD3-201ENST00000315571 PIK3R4Q99570 1358 aa14.87□□□□□ -0.03
LDLRAD3-201ENST00000315571 DNTTIP2Q5QJE6 756 aaKnown RBP14.87□□□□□ -0.03
LDLRAD3-201ENST00000315571 TESK2Q96S53 571 aa14.87□□□□□ -0.03
LDLRAD3-201ENST00000315571 WAPLQ7Z5K2 1190 aa14.86□□□□□ -0.03
LDLRAD3-201ENST00000315571 SETD1AO15047 1707 aaKnown RBP14.86□□□□□ -0.03
LDLRAD3-201ENST00000315571 MINK1Q8N4C8 1332 aaPredicted RBP14.85□□□□□ -0.03
LDLRAD3-201ENST00000315571 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
LDLRAD3-201ENST00000315571 R3HCC1Q9Y3T6 440 aaKnown RBP14.85□□□□□ -0.03
LDLRAD3-201ENST00000315571 XRCC6P12956 609 aaKnown RBP eCLIP14.84□□□□□ -0.03
LDLRAD3-201ENST00000315571 PTPRUQ92729 1446 aa14.84□□□□□ -0.03
LDLRAD3-201ENST00000315571 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
LDLRAD3-201ENST00000315571 KCNA6P17658 529 aa14.84□□□□□ -0.03
LDLRAD3-201ENST00000315571 CCDC7Q96M83 1385 aa14.84□□□□□ -0.03
LDLRAD3-201ENST00000315571 DLC1Q96QB1 1528 aa14.83□□□□□ -0.03
LDLRAD3-201ENST00000315571 TECPR2O15040 1411 aa14.83□□□□□ -0.04
LDLRAD3-201ENST00000315571 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
LDLRAD3-201ENST00000315571 ROBO2Q9HCK4 1378 aa14.83□□□□□ -0.04
LDLRAD3-201ENST00000315571 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
LDLRAD3-201ENST00000315571 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 PLEKHH1Q9ULM0 1364 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 SBNO2Q9Y2G9 1366 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 MAP7D2Q96T17 732 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 DISP3Q9P2K9 1392 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 EVC2Q86UK5 1308 aa14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 ARHGEF28Q8N1W1 1705 aaKnown RBP14.82□□□□□ -0.04
LDLRAD3-201ENST00000315571 PRKRIP1Q9H875 184 aaPredicted RBP14.81□□□□□ -0.04
LDLRAD3-201ENST00000315571 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
LDLRAD3-201ENST00000315571 CPS1P31327 1500 aa14.8□□□□□ -0.04
LDLRAD3-201ENST00000315571 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
LDLRAD3-201ENST00000315571 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
LDLRAD3-201ENST00000315571 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
LDLRAD3-201ENST00000315571 PLIN1O60240 522 aa14.79□□□□□ -0.04
LDLRAD3-201ENST00000315571 QRICH2Q9H0J4 1663 aa14.79□□□□□ -0.04
LDLRAD3-201ENST00000315571 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
LDLRAD3-201ENST00000315571 PROSER2Q86WR7 435 aaPredicted RBP14.78□□□□□ -0.04
LDLRAD3-201ENST00000315571 PRDM4Q9UKN5 801 aa14.78□□□□□ -0.04
LDLRAD3-201ENST00000315571 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
LDLRAD3-201ENST00000315571 MRE11P49959 708 aa14.78□□□□□ -0.04
LDLRAD3-201ENST00000315571 FAM161AQ3B820 660 aa14.78□□□□□ -0.04
LDLRAD3-201ENST00000315571 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
LDLRAD3-201ENST00000315571 STRCQ7RTU9 1775 aa14.76□□□□□ -0.05
LDLRAD3-201ENST00000315571 CDK19Q9BWU1 502 aa14.76□□□□□ -0.05
LDLRAD3-201ENST00000315571 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
LDLRAD3-201ENST00000315571 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
LDLRAD3-201ENST00000315571 E9PSI1 815 aa14.75□□□□□ -0.05
LDLRAD3-201ENST00000315571 CHMP4AQ9BY43 222 aa14.75□□□□□ -0.05
LDLRAD3-201ENST00000315571 WASLO00401 505 aaPredicted RBP14.74□□□□□ -0.05
LDLRAD3-201ENST00000315571 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.74□□□□□ -0.05
LDLRAD3-201ENST00000315571 ZNF335Q9H4Z2 1342 aaPredicted RBP14.73□□□□□ -0.05
LDLRAD3-201ENST00000315571 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
LDLRAD3-201ENST00000315571 GTF2E1P29083 439 aaPredicted RBP14.73□□□□□ -0.05
LDLRAD3-201ENST00000315571 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
LDLRAD3-201ENST00000315571 NKTRP30414 1462 aaKnown RBP14.72□□□□□ -0.05
LDLRAD3-201ENST00000315571 ATAD2Q6PL18 1390 aa14.72□□□□□ -0.05
LDLRAD3-201ENST00000315571 NUTM2FA1L443 756 aa14.72□□□□□ -0.05
LDLRAD3-201ENST00000315571 PUS7Q96PZ0 661 aaKnown RBP14.72□□□□□ -0.05
LDLRAD3-201ENST00000315571 NWD1Q149M9 1564 aa14.72□□□□□ -0.05
LDLRAD3-201ENST00000315571 IPO4Q8TEX9 1081 aaKnown RBP14.71□□□□□ -0.05
LDLRAD3-201ENST00000315571 GRPEL1Q9HAV7 217 aa14.71□□□□□ -0.05
LDLRAD3-201ENST00000315571 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.06
LDLRAD3-201ENST00000315571 UQCRHLA0A096LP55 91 aa14.7□□□□□ -0.06
LDLRAD3-201ENST00000315571 UQCRHP07919 91 aa14.7□□□□□ -0.06
LDLRAD3-201ENST00000315571 TRAK2O60296 914 aa14.7□□□□□ -0.06
LDLRAD3-201ENST00000315571 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
LDLRAD3-201ENST00000315571 PPP4R3BQ5MIZ7 849 aa14.69□□□□□ -0.06
LDLRAD3-201ENST00000315571 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
LDLRAD3-201ENST00000315571 NUDT16Q96DE0 195 aaKnown RBP14.69□□□□□ -0.06
LDLRAD3-201ENST00000315571 CRBNQ96SW2 442 aa14.69□□□□□ -0.06
LDLRAD3-201ENST00000315571 PANK3Q9H999 370 aa14.69□□□□□ -0.06
LDLRAD3-201ENST00000315571 ADGRL3Q9HAR2 1447 aa14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 CGNQ9P2M7 1197 aaKnown RBP14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 CBX1P83916 185 aa14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 ZNF771Q7L3S4 317 aaPredicted RBP14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 MTERF4Q7Z6M4 381 aaKnown RBP14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 DHX37Q8IY37 1157 aaKnown RBP14.68□□□□□ -0.06
LDLRAD3-201ENST00000315571 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.67□□□□□ -0.06
LDLRAD3-201ENST00000315571 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
LDLRAD3-201ENST00000315571 CABP1Q9NZU7 370 aa14.66□□□□□ -0.06
LDLRAD3-201ENST00000315571 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
LDLRAD3-201ENST00000315571 PTMAP06454 111 aaKnown RBP14.66□□□□□ -0.06
LDLRAD3-201ENST00000315571 ATF3P18847 181 aa14.66□□□□□ -0.06
LDLRAD3-201ENST00000315571 ADGRB2O60241 1585 aa14.66□□□□□ -0.06
LDLRAD3-201ENST00000315571 NINLQ9Y2I6 1382 aa14.66□□□□□ -0.06
LDLRAD3-201ENST00000315571 SMG6Q86US8 1419 aaKnown RBP14.65□□□□□ -0.06
LDLRAD3-201ENST00000315571 TERF2IPQ9NYB0 399 aa14.65□□□□□ -0.06
LDLRAD3-201ENST00000315571 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
LDLRAD3-201ENST00000315571 KNSTRNQ9Y448 316 aa14.64□□□□□ -0.07
LDLRAD3-201ENST00000315571 MSH6P52701 1360 aa14.64□□□□□ -0.07
LDLRAD3-201ENST00000315571 PPIP5K1Q6PFW1 1433 aa14.64□□□□□ -0.07
LDLRAD3-201ENST00000315571 NCOA3Q9Y6Q9 1424 aa14.64□□□□□ -0.07
LDLRAD3-201ENST00000315571 PRR36Q9H6K5 1346 aa14.63□□□□□ -0.07
LDLRAD3-201ENST00000315571 IGSF3O75054 1194 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms