RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 ALS2Q96Q42 1657 aa25.6■■□□□ 1.69
CDK4-202ENST00000312990 TTC21BQ7Z4L5 1316 aa25.6■■□□□ 1.69
CDK4-202ENST00000312990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.6■■□□□ 1.69
CDK4-202ENST00000312990 USP54Q70EL1 1684 aa25.6■■□□□ 1.69
CDK4-202ENST00000312990 TOM1O60784 492 aa25.59■■□□□ 1.69
CDK4-202ENST00000312990 PSME1Q06323 249 aa25.59■■□□□ 1.69
CDK4-202ENST00000312990 BRD4O60885 1362 aaPredicted RBP25.59■■□□□ 1.69
CDK4-202ENST00000312990 NPHP3Q7Z494 1330 aa25.59■■□□□ 1.69
CDK4-202ENST00000312990 XPCQ01831 940 aaPredicted RBP25.58■■□□□ 1.69
CDK4-202ENST00000312990 FYB1O15117 783 aa25.58■■□□□ 1.68
CDK4-202ENST00000312990 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.68
CDK4-202ENST00000312990 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
CDK4-202ENST00000312990 AHDC1Q5TGY3 1603 aaPredicted RBP25.57■■□□□ 1.68
CDK4-202ENST00000312990 NSD2O96028 1365 aa25.57■■□□□ 1.68
CDK4-202ENST00000312990 UBAP1LF5GYI3 381 aa25.56■■□□□ 1.68
CDK4-202ENST00000312990 TTC21AQ8NDW8 1320 aa25.56■■□□□ 1.68
CDK4-202ENST00000312990 KRT28Q7Z3Y7 464 aa25.55■■□□□ 1.68
CDK4-202ENST00000312990 NME9Q86XW9 330 aa25.55■■□□□ 1.68
CDK4-202ENST00000312990 PRKRIP1Q9H875 184 aaPredicted RBP25.55■■□□□ 1.68
CDK4-202ENST00000312990 PARD3Q8TEW0 1356 aa25.54■■□□□ 1.68
CDK4-202ENST00000312990 GGNBP2Q9H3C7 697 aa25.54■■□□□ 1.68
CDK4-202ENST00000312990 ANP32CO43423 234 aa25.53■■□□□ 1.68
CDK4-202ENST00000312990 PHLPP1O60346 1717 aa25.53■■□□□ 1.68
CDK4-202ENST00000312990 SOS2Q07890 1332 aaPredicted RBP25.52■■□□□ 1.68
CDK4-202ENST00000312990 PAK3O75914 559 aaPredicted RBP25.52■■□□□ 1.68
CDK4-202ENST00000312990 ZRANB1Q9UGI0 708 aa25.52■■□□□ 1.68
CDK4-202ENST00000312990 OVOS2A0A0J9YW53 1432 aa25.51■■□□□ 1.67
CDK4-202ENST00000312990 OVOS2Q6IE36 1432 aa25.51■■□□□ 1.67
CDK4-202ENST00000312990 MAP2P11137 1827 aaKnown RBP25.51■■□□□ 1.67
CDK4-202ENST00000312990 SBNO1A3KN83 1393 aa25.51■■□□□ 1.67
CDK4-202ENST00000312990 PIP4K2BP78356 416 aa25.51■■□□□ 1.67
CDK4-202ENST00000312990 TNS3Q68CZ2 1445 aa25.49■■□□□ 1.67
CDK4-202ENST00000312990 CRYBG1Q9Y4K1 1723 aa25.49■■□□□ 1.67
CDK4-202ENST00000312990 MIER1Q8N108 512 aa25.48■■□□□ 1.67
CDK4-202ENST00000312990 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
CDK4-202ENST00000312990 USP31Q70CQ4 1352 aa25.48■■□□□ 1.67
CDK4-202ENST00000312990 RALBP1Q15311 655 aa25.47■■□□□ 1.67
CDK4-202ENST00000312990 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
CDK4-202ENST00000312990 SPATA31A3Q5VYP0 1347 aa25.45■■□□□ 1.67
CDK4-202ENST00000312990 SCAF1Q9H7N4 1312 aaKnown RBP25.45■■□□□ 1.67
CDK4-202ENST00000312990 MORC1Q86VD1 984 aa25.45■■□□□ 1.66
CDK4-202ENST00000312990 NUTM2GQ5VZR2 741 aa25.44■■□□□ 1.66
CDK4-202ENST00000312990 COG3Q96JB2 828 aa25.44■■□□□ 1.66
CDK4-202ENST00000312990 NLRP6P59044 892 aa25.43■■□□□ 1.66
CDK4-202ENST00000312990 PHRF1Q9P1Y6 1649 aaKnown RBP25.43■■□□□ 1.66
CDK4-202ENST00000312990 ABCA3Q99758 1704 aa25.43■■□□□ 1.66
CDK4-202ENST00000312990 MED1Q15648 1581 aaPredicted RBP25.42■■□□□ 1.66
CDK4-202ENST00000312990 LTN1O94822 1766 aa25.41■■□□□ 1.66
CDK4-202ENST00000312990 SLIT3O75094 1523 aa25.41■■□□□ 1.66
CDK4-202ENST00000312990 TNNT2P45379 298 aaPredicted RBP25.4■■□□□ 1.66
CDK4-202ENST00000312990 LMOD2Q6P5Q4 547 aa25.4■■□□□ 1.66
CDK4-202ENST00000312990 ARHGEF10O15013 1369 aa25.4■■□□□ 1.66
CDK4-202ENST00000312990 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
CDK4-202ENST00000312990 NFAT5O94916 1531 aa25.38■■□□□ 1.65
CDK4-202ENST00000312990 PPP2R1AP30153 589 aa25.38■■□□□ 1.65
CDK4-202ENST00000312990 COL22A1Q8NFW1 1626 aaPredicted RBP25.38■■□□□ 1.65
CDK4-202ENST00000312990 USP19O94966 1318 aa25.37■■□□□ 1.65
CDK4-202ENST00000312990 NLRP13Q86W25 1043 aa25.37■■□□□ 1.65
CDK4-202ENST00000312990 FBLN1P23142 703 aa25.36■■□□□ 1.65
CDK4-202ENST00000312990 AATKQ6ZMQ8 1374 aa25.35■■□□□ 1.65
CDK4-202ENST00000312990 PEAK1Q9H792 1746 aa25.34■■□□□ 1.65
CDK4-202ENST00000312990 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
CDK4-202ENST00000312990 SHPRHQ149N8 1683 aa25.33■■□□□ 1.65
CDK4-202ENST00000312990 SMG6Q86US8 1419 aaKnown RBP25.32■■□□□ 1.64
CDK4-202ENST00000312990 SOX12O15370 315 aa25.31■■□□□ 1.64
CDK4-202ENST00000312990 CCDC184Q52MB2 194 aa25.31■■□□□ 1.64
CDK4-202ENST00000312990 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
CDK4-202ENST00000312990 PLEKHG5O94827 1062 aa25.3■■□□□ 1.64
CDK4-202ENST00000312990 CCER2I3L3R5 266 aa25.29■■□□□ 1.64
CDK4-202ENST00000312990 RRS1Q15050 365 aaKnown RBP25.29■■□□□ 1.64
CDK4-202ENST00000312990 CABLES1Q8TDN4 633 aa25.29■■□□□ 1.64
CDK4-202ENST00000312990 POLKQ9UBT6 870 aa25.29■■□□□ 1.64
CDK4-202ENST00000312990 GCP02774 474 aa25.28■■□□□ 1.64
CDK4-202ENST00000312990 RGPD5Q99666 1765 aa25.28■■□□□ 1.64
CDK4-202ENST00000312990 MTHFSP49914 203 aa25.27■■□□□ 1.64
CDK4-202ENST00000312990 KCNH5Q8NCM2 988 aa25.27■■□□□ 1.64
CDK4-202ENST00000312990 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
CDK4-202ENST00000312990 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
CDK4-202ENST00000312990 MAP3K19Q56UN5 1328 aa25.25■■□□□ 1.63
CDK4-202ENST00000312990 COL18A1P39060 1754 aa25.24■■□□□ 1.63
CDK4-202ENST00000312990 COL3A1P02461 1466 aaPredicted RBP25.24■■□□□ 1.63
CDK4-202ENST00000312990 HSPA1LP34931 641 aa25.23■■□□□ 1.63
CDK4-202ENST00000312990 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
CDK4-202ENST00000312990 PPM1GO15355 546 aaPredicted RBP25.2■■□□□ 1.62
CDK4-202ENST00000312990 ARHGEF25Q86VW2 580 aa25.2■■□□□ 1.62
CDK4-202ENST00000312990 INSRP06213 1382 aa25.19■■□□□ 1.62
CDK4-202ENST00000312990 JCADQ9P266 1359 aa25.19■■□□□ 1.62
CDK4-202ENST00000312990 CPDO75976 1380 aa25.18■■□□□ 1.62
CDK4-202ENST00000312990 FLT4P35916 1363 aa25.18■■□□□ 1.62
CDK4-202ENST00000312990 KIF24Q5T7B8 1368 aa25.18■■□□□ 1.62
CDK4-202ENST00000312990 ZC3H6P61129 1189 aaKnown RBP25.18■■□□□ 1.62
CDK4-202ENST00000312990 RTL1A6NKG5 1358 aa25.18■■□□□ 1.62
CDK4-202ENST00000312990 KIAA0232Q92628 1395 aa25.17■■□□□ 1.62
CDK4-202ENST00000312990 LMO7Q8WWI1 1683 aa25.17■■□□□ 1.62
CDK4-202ENST00000312990 ABCC6O95255 1503 aa25.16■■□□□ 1.62
CDK4-202ENST00000312990 RGPD2P0DJD1 1756 aa25.15■■□□□ 1.62
CDK4-202ENST00000312990 HOXC9P31274 260 aa25.15■■□□□ 1.62
CDK4-202ENST00000312990 AMPHP49418 695 aa25.15■■□□□ 1.62
CDK4-202ENST00000312990 HAP1P54257 671 aaPredicted RBP25.14■■□□□ 1.62
CDK4-202ENST00000312990 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms