RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 NBPF1Q3BBV0 1214 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 CYB5RLQ6IPT4 315 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 SKAP1Q86WV1 359 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
ERCC4-201ENST00000311895 CADPSQ9ULU8 1353 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 NLRP6P59044 892 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 BACH2Q9BYV9 841 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 FGD6Q6ZV73 1430 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 IKQ13123 557 aaPredicted RBP10.18□□□□□ -0.78
ERCC4-201ENST00000311895 LETM1O95202 739 aaPredicted RBP10.18□□□□□ -0.78
ERCC4-201ENST00000311895 MBD3O95983 291 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 SLC4A2P04920 1241 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 CCDC30Q5VVM6 783 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 GRPEL1Q9HAV7 217 aa10.18□□□□□ -0.78
ERCC4-201ENST00000311895 RABEP1Q15276 862 aa10.17□□□□□ -0.78
ERCC4-201ENST00000311895 KLHL34Q8N239 644 aa10.17□□□□□ -0.78
ERCC4-201ENST00000311895 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
ERCC4-201ENST00000311895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.78
ERCC4-201ENST00000311895 XBP1P17861 261 aa10.17□□□□□ -0.78
ERCC4-201ENST00000311895 AXDND1Q5T1B0 1012 aaPredicted RBP10.17□□□□□ -0.78
ERCC4-201ENST00000311895 SERPINC1P01008 464 aa10.17□□□□□ -0.78
ERCC4-201ENST00000311895 CDR1P51861 262 aa10.17□□□□□ -0.78
ERCC4-201ENST00000311895 STK38Q15208 465 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 UQCRHLA0A096LP55 91 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 GNAI2P04899 355 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 UQCRHP07919 91 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 MYOM3Q5VTT5 1437 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 K7ELQ4 463 aaPredicted RBP10.16□□□□□ -0.78
ERCC4-201ENST00000311895 TNMDQ9H2S6 317 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 GNAI3P08754 354 aa10.16□□□□□ -0.78
ERCC4-201ENST00000311895 MAPK8IP2Q13387 824 aaPredicted RBP10.16□□□□□ -0.78
ERCC4-201ENST00000311895 PLCD4Q9BRC7 762 aa10.15□□□□□ -0.78
ERCC4-201ENST00000311895 SLC12A5Q9H2X9 1139 aa10.15□□□□□ -0.78
ERCC4-201ENST00000311895 ME1P48163 572 aa10.15□□□□□ -0.78
ERCC4-201ENST00000311895 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
ERCC4-201ENST00000311895 AAMPQ13685 434 aa10.15□□□□□ -0.79
ERCC4-201ENST00000311895 TSPYL1Q9H0U9 437 aa10.15□□□□□ -0.79
ERCC4-201ENST00000311895 FILIP1LQ4L180 1135 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 CWC15Q9P013 229 aaKnown RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 MAGEC2Q9UBF1 373 aaPredicted RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 MTERF4Q7Z6M4 381 aaKnown RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 GCC1Q96CN9 775 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 TTC39AQ5SRH9 613 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC192P0DO97 292 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 SART3Q15020 963 aaKnown RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 CYP46A1Q9Y6A2 500 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 MIA2Q96PC5 1412 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 SMARCE1Q969G3 411 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 CDK5RAP3Q96JB5 506 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 PKNOX2Q96KN3 472 aa10.14□□□□□ -0.79
ERCC4-201ENST00000311895 ZNF396Q96N95 335 aaPredicted RBP10.14□□□□□ -0.79
ERCC4-201ENST00000311895 MYL6BP14649 208 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 CWC22Q9HCG8 908 aaKnown RBP10.13□□□□□ -0.79
ERCC4-201ENST00000311895 C11orf95C9JLR9 678 aaPredicted RBP10.13□□□□□ -0.79
ERCC4-201ENST00000311895 LRRCC1Q9C099 1032 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 PDCP20941 246 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 MCM2P49736 904 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 FAM193AP78312 1265 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 MEX3CQ5U5Q3 659 aaKnown RBP10.13□□□□□ -0.79
ERCC4-201ENST00000311895 SULT6B1Q6IMI4 303 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 CHD1LQ86WJ1 897 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 ERCC4Q92889 916 aaPredicted RBP10.13□□□□□ -0.79
ERCC4-201ENST00000311895 PDE3AQ14432 1141 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 NBPF8Q3BBV2 869 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 LARP1BQ659C4 914 aaKnown RBP10.13□□□□□ -0.79
ERCC4-201ENST00000311895 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
ERCC4-201ENST00000311895 LEKR1Q6ZMV7 388 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 ANKRD50Q9ULJ7 1429 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 ATP2B2Q01814 1243 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 PRAM1Q96QH2 718 aa10.13□□□□□ -0.79
ERCC4-201ENST00000311895 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 ZHX3Q9H4I2 956 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
ERCC4-201ENST00000311895 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 RDXP35241 583 aaKnown RBP10.12□□□□□ -0.79
ERCC4-201ENST00000311895 IL1RAPL2Q9NP60 686 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 LRRC9Q6ZRR7 1453 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC66A2RUB6 948 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
ERCC4-201ENST00000311895 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 CENPHQ9H3R5 247 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 CAMK4Q16566 473 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 KRT18P05783 430 aaKnown RBP10.12□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC112Q8NEF3 446 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 NUP133Q8WUM0 1156 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 PIBF1Q8WXW3 757 aa10.12□□□□□ -0.79
ERCC4-201ENST00000311895 ATF3P18847 181 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 RRBP1Q9P2E9 1410 aaKnown RBP10.11□□□□□ -0.79
ERCC4-201ENST00000311895 RAD54L2Q9Y4B4 1467 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 MVPQ14764 893 aaKnown RBP10.11□□□□□ -0.79
ERCC4-201ENST00000311895 HSP90AB3PQ58FF7 597 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
ERCC4-201ENST00000311895 HMGN5P82970 282 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms