RNA–Protein interactions for RNA: ENST00000311101.9

PARL-201, Transcript of presenilin associated rhomboid like, humanhuman

TSL 1 (best) BASIC

Gene PARL, Length 1,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARL-201ENST00000311101 PAK3O75914 559 aaPredicted RBP28.21■■■□□ 2.11
PARL-201ENST00000311101 TIMELESSQ9UNS1 1208 aa28.21■■■□□ 2.11
PARL-201ENST00000311101 SBNO2Q9Y2G9 1366 aa28.21■■■□□ 2.11
PARL-201ENST00000311101 UPF1Q92900 1129 aaKnown RBP eCLIP28.2■■■□□ 2.1
PARL-201ENST00000311101 CABP1Q9NZU7 370 aa28.2■■■□□ 2.1
PARL-201ENST00000311101 ABCA3Q99758 1704 aa28.19■■■□□ 2.1
PARL-201ENST00000311101 FNBP4Q8N3X1 1017 aaPredicted RBP28.19■■■□□ 2.1
PARL-201ENST00000311101 HAP1P54257 671 aaPredicted RBP28.18■■■□□ 2.1
PARL-201ENST00000311101 ATRNO75882 1429 aa28.15■■■□□ 2.1
PARL-201ENST00000311101 TRPC5Q9UL62 973 aaPredicted RBP28.14■■■□□ 2.1
PARL-201ENST00000311101 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
PARL-201ENST00000311101 BCL9LQ86UU0 1499 aa28.13■■■□□ 2.09
PARL-201ENST00000311101 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
PARL-201ENST00000311101 NUTM2GQ5VZR2 741 aa28.11■■■□□ 2.09
PARL-201ENST00000311101 TESK2Q96S53 571 aa28.11■■■□□ 2.09
PARL-201ENST00000311101 CRYBG1Q9Y4K1 1723 aa28.11■■■□□ 2.09
PARL-201ENST00000311101 USP6P35125 1406 aa28.09■■■□□ 2.09
PARL-201ENST00000311101 SLIT2O94813 1529 aa28.09■■■□□ 2.09
PARL-201ENST00000311101 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.08■■■□□ 2.09
PARL-201ENST00000311101 USP47Q96K76 1375 aa28.08■■■□□ 2.09
PARL-201ENST00000311101 FAM83GA6ND36 823 aa28.06■■■□□ 2.08
PARL-201ENST00000311101 ABTB2Q8N961 1025 aa28.06■■■□□ 2.08
PARL-201ENST00000311101 SSH2Q76I76 1423 aa28.05■■■□□ 2.08
PARL-201ENST00000311101 BRD4O60885 1362 aaPredicted RBP28.04■■■□□ 2.08
PARL-201ENST00000311101 PLCH1Q4KWH8 1693 aa28.03■■■□□ 2.08
PARL-201ENST00000311101 UNC5CLQ8IV45 518 aa28.03■■■□□ 2.08
PARL-201ENST00000311101 CPSF1Q10570 1443 aaKnown RBP28.02■■■□□ 2.08
PARL-201ENST00000311101 PHRF1Q9P1Y6 1649 aaKnown RBP28.02■■■□□ 2.08
PARL-201ENST00000311101 AKAP12Q02952 1782 aa28.01■■■□□ 2.08
PARL-201ENST00000311101 ZNF692Q9BU19 519 aaPredicted RBP28■■■□□ 2.07
PARL-201ENST00000311101 GLI3P10071 1580 aa27.99■■■□□ 2.07
PARL-201ENST00000311101 USP19O94966 1318 aa27.99■■■□□ 2.07
PARL-201ENST00000311101 PUS7Q96PZ0 661 aaKnown RBP27.99■■■□□ 2.07
PARL-201ENST00000311101 CD163L1Q9NR16 1453 aa27.98■■■□□ 2.07
PARL-201ENST00000311101 TMC1Q8TDI8 760 aa27.98■■■□□ 2.07
PARL-201ENST00000311101 GJD4Q96KN9 370 aaPredicted RBP27.98■■■□□ 2.07
PARL-201ENST00000311101 SLC12A5Q9H2X9 1139 aa27.98■■■□□ 2.07
PARL-201ENST00000311101 NWD2Q9ULI1 1742 aa27.98■■■□□ 2.07
PARL-201ENST00000311101 NLRP13Q86W25 1043 aa27.97■■■□□ 2.07
PARL-201ENST00000311101 KTN1Q86UP2 1357 aaKnown RBP27.97■■■□□ 2.07
PARL-201ENST00000311101 KIAA0232Q92628 1395 aa27.97■■■□□ 2.07
PARL-201ENST00000311101 COL14A1Q05707 1796 aaKnown RBP27.96■■■□□ 2.07
PARL-201ENST00000311101 TTC21BQ7Z4L5 1316 aa27.96■■■□□ 2.07
PARL-201ENST00000311101 NRKQ7Z2Y5 1582 aa27.96■■■□□ 2.07
PARL-201ENST00000311101 ZC3H6P61129 1189 aaKnown RBP27.96■■■□□ 2.07
PARL-201ENST00000311101 PRDM11Q9NQV5 511 aa27.96■■■□□ 2.07
PARL-201ENST00000311101 EP400Q96L91 3159 aa27.95■■■□□ 2.07
PARL-201ENST00000311101 PIK3C2AO00443 1686 aa27.95■■■□□ 2.07
PARL-201ENST00000311101 BTG4Q9NY30 223 aa27.95■■■□□ 2.06
PARL-201ENST00000311101 SLC24A1O60721 1099 aa27.94■■■□□ 2.06
PARL-201ENST00000311101 NLRP6P59044 892 aa27.94■■■□□ 2.06
PARL-201ENST00000311101 CHRNA2Q15822 529 aa27.94■■■□□ 2.06
PARL-201ENST00000311101 MON2Q7Z3U7 1717 aa27.93■■■□□ 2.06
PARL-201ENST00000311101 NRAPQ86VF7 1730 aa27.93■■■□□ 2.06
PARL-201ENST00000311101 GCP02774 474 aa27.92■■■□□ 2.06
PARL-201ENST00000311101 TMF1P82094 1093 aa27.92■■■□□ 2.06
PARL-201ENST00000311101 VPS72Q15906 364 aa27.92■■■□□ 2.06
PARL-201ENST00000311101 TTC21AQ8NDW8 1320 aa27.91■■■□□ 2.06
PARL-201ENST00000311101 BRWD3Q6RI45 1802 aa27.9■■■□□ 2.06
PARL-201ENST00000311101 A0A1W2PP64 1363 aa27.89■■■□□ 2.06
PARL-201ENST00000311101 SLIT3O75094 1523 aa27.89■■■□□ 2.06
PARL-201ENST00000311101 HDGFL2Q7Z4V5 671 aaPredicted RBP27.89■■■□□ 2.06
PARL-201ENST00000311101 CPDO75976 1380 aa27.88■■■□□ 2.05
PARL-201ENST00000311101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.88■■■□□ 2.052e-6■■■■□ 22.1
PARL-201ENST00000311101 CCDC9Q9Y3X0 531 aaKnown RBP27.88■■■□□ 2.05
PARL-201ENST00000311101 TERF2IPQ9NYB0 399 aa27.87■■■□□ 2.05
PARL-201ENST00000311101 NINLQ9Y2I6 1382 aa27.86■■■□□ 2.05
PARL-201ENST00000311101 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
PARL-201ENST00000311101 EDC4Q6P2E9 1401 aaKnown RBP27.84■■■□□ 2.05
PARL-201ENST00000311101 NME9Q86XW9 330 aa27.83■■■□□ 2.05
PARL-201ENST00000311101 LMO7Q8WWI1 1683 aa27.82■■■□□ 2.04
PARL-201ENST00000311101 CAMTA1Q9Y6Y1 1673 aa27.81■■■□□ 2.04
PARL-201ENST00000311101 HSPA5P11021 654 aaKnown RBP27.8■■■□□ 2.04
PARL-201ENST00000311101 SEPT12Q8IYM1 358 aa27.8■■■□□ 2.04
PARL-201ENST00000311101 STRN4Q9NRL3 753 aa27.8■■■□□ 2.04
PARL-201ENST00000311101 USP31Q70CQ4 1352 aa27.8■■■□□ 2.04
PARL-201ENST00000311101 SPATA31A5Q5VU36 1347 aa27.79■■■□□ 2.04
PARL-201ENST00000311101 SPATA31A7Q8IWB4 1347 aa27.79■■■□□ 2.04
PARL-201ENST00000311101 ZBTB7CA1YPR0 619 aa27.79■■■□□ 2.04
PARL-201ENST00000311101 SOX12O15370 315 aa27.79■■■□□ 2.04
PARL-201ENST00000311101 EIF4G2P78344 907 aaKnown RBP eCLIP27.79■■■□□ 2.04
PARL-201ENST00000311101 CDCA8Q53HL2 280 aa27.79■■■□□ 2.04
PARL-201ENST00000311101 ANKRD36BQ8N2N9 1353 aa27.78■■■□□ 2.04
PARL-201ENST00000311101 ONECUT3O60422 494 aaPredicted RBP27.78■■■□□ 2.04
PARL-201ENST00000311101 KCNH5Q8NCM2 988 aa27.77■■■□□ 2.04
PARL-201ENST00000311101 USP54Q70EL1 1684 aa27.76■■■□□ 2.03
PARL-201ENST00000311101 NFAT5O94916 1531 aa27.76■■■□□ 2.03
PARL-201ENST00000311101 AATKQ6ZMQ8 1374 aa27.75■■■□□ 2.03
PARL-201ENST00000311101 EVA1CP58658 441 aa27.75■■■□□ 2.03
PARL-201ENST00000311101 FAM98CQ17RN3 349 aaKnown RBP27.75■■■□□ 2.03
PARL-201ENST00000311101 ARHGEF25Q86VW2 580 aa27.75■■■□□ 2.03
PARL-201ENST00000311101 SPATA31A1Q5TZJ5 1347 aa27.73■■■□□ 2.03
PARL-201ENST00000311101 COL5A2P05997 1499 aaPredicted RBP27.73■■■□□ 2.03
PARL-201ENST00000311101 LARP1Q6PKG0 1096 aaKnown RBP27.73■■■□□ 2.03
PARL-201ENST00000311101 MYOM1P52179 1685 aa27.72■■■□□ 2.03
PARL-201ENST00000311101 A0A0G2JS52 829 aa27.72■■■□□ 2.03
PARL-201ENST00000311101 MYT1Q01538 1121 aa27.72■■■□□ 2.03
PARL-201ENST00000311101 COL18A1P39060 1754 aa27.72■■■□□ 2.03
PARL-201ENST00000311101 OVOS2A0A0J9YW53 1432 aa27.71■■■□□ 2.03
PARL-201ENST00000311101 OVOS2Q6IE36 1432 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms