RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 FAM69CQ0P6D2 419 aa9.38□□□□□ -0.91
RGPD3-201ENST00000304514 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
RGPD3-201ENST00000304514 PPIP5K1Q6PFW1 1433 aa9.38□□□□□ -0.91
RGPD3-201ENST00000304514 RGPD8O14715 1765 aaPredicted RBP9.38□□□□□ -0.91
RGPD3-201ENST00000304514 XRN1Q8IZH2 1706 aaKnown RBP9.38□□□□□ -0.91
RGPD3-201ENST00000304514 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
RGPD3-201ENST00000304514 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
RGPD3-201ENST00000304514 CFAP53Q96M91 514 aa9.37□□□□□ -0.91
RGPD3-201ENST00000304514 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
RGPD3-201ENST00000304514 METP08581 1390 aa9.37□□□□□ -0.91
RGPD3-201ENST00000304514 EDC4Q6P2E9 1401 aaKnown RBP9.37□□□□□ -0.91
RGPD3-201ENST00000304514 LRRC37A3O60309 1634 aa9.37□□□□□ -0.91
RGPD3-201ENST00000304514 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
RGPD3-201ENST00000304514 STK26Q9P289 416 aa9.36□□□□□ -0.91
RGPD3-201ENST00000304514 MINK1Q8N4C8 1332 aaPredicted RBP9.36□□□□□ -0.91
RGPD3-201ENST00000304514 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
RGPD3-201ENST00000304514 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
RGPD3-201ENST00000304514 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
RGPD3-201ENST00000304514 PANK1Q8TE04 598 aa9.36□□□□□ -0.91
RGPD3-201ENST00000304514 IL16Q14005 1332 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 RLBP1P12271 317 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 CLUAP1Q96AJ1 413 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 ZBTB47Q9UFB7 747 aaPredicted RBP9.35□□□□□ -0.91
RGPD3-201ENST00000304514 SLIT1O75093 1534 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 TNNQ9UQP3 1299 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
RGPD3-201ENST00000304514 AAMPQ13685 434 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 PIK3C2AO00443 1686 aa9.35□□□□□ -0.91
RGPD3-201ENST00000304514 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
RGPD3-201ENST00000304514 ADAMTS13Q76LX8 1427 aa9.34□□□□□ -0.91
RGPD3-201ENST00000304514 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
RGPD3-201ENST00000304514 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
RGPD3-201ENST00000304514 CT47B1P0C2W7 299 aaPredicted RBP9.34□□□□□ -0.91
RGPD3-201ENST00000304514 USP19O94966 1318 aa9.33□□□□□ -0.92
RGPD3-201ENST00000304514 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
RGPD3-201ENST00000304514 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
RGPD3-201ENST00000304514 SIRT1Q96EB6 747 aa9.33□□□□□ -0.92
RGPD3-201ENST00000304514 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
RGPD3-201ENST00000304514 CABP1Q9NZU7 370 aa9.33□□□□□ -0.92
RGPD3-201ENST00000304514 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
RGPD3-201ENST00000304514 ZNF142P52746 1687 aaPredicted RBP9.32□□□□□ -0.92
RGPD3-201ENST00000304514 COG6Q9Y2V7 657 aa9.32□□□□□ -0.92
RGPD3-201ENST00000304514 U2AF1L5P0DN76 240 aaPredicted RBP9.32□□□□□ -0.92
RGPD3-201ENST00000304514 U2AF1Q01081 240 aaKnown RBP eCLIP9.32□□□□□ -0.92
RGPD3-201ENST00000304514 ARHGAP23Q9P227 1491 aa9.32□□□□□ -0.92
RGPD3-201ENST00000304514 DDRGK1Q96HY6 314 aa9.32□□□□□ -0.92
RGPD3-201ENST00000304514 FAM208AQ9UK61 1670 aaKnown RBP9.32□□□□□ -0.92
RGPD3-201ENST00000304514 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
RGPD3-201ENST00000304514 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
RGPD3-201ENST00000304514 POGKQ9P215 609 aa9.31□□□□□ -0.92
RGPD3-201ENST00000304514 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
RGPD3-201ENST00000304514 TUBGCP6Q96RT7 1819 aa9.31□□□□□ -0.92
RGPD3-201ENST00000304514 PTPRUQ92729 1446 aa9.31□□□□□ -0.92
RGPD3-201ENST00000304514 PCDHB15Q9Y5E8 787 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 TNRQ92752 1358 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 TMEM2Q9UHN6 1383 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 PLEKHG1Q9ULL1 1385 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 OVOS2A0A0J9YW53 1432 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 OVOS2Q6IE36 1432 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 MVPQ14764 893 aaKnown RBP9.3□□□□□ -0.92
RGPD3-201ENST00000304514 PTCH1Q13635 1447 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 TSR2Q969E8 191 aaKnown RBP9.3□□□□□ -0.92
RGPD3-201ENST00000304514 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 SENP3Q9H4L4 574 aaPredicted RBP9.3□□□□□ -0.92
RGPD3-201ENST00000304514 PIK3R4Q99570 1358 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 ROBO2Q9HCK4 1378 aa9.3□□□□□ -0.92
RGPD3-201ENST00000304514 SSH2Q76I76 1423 aa9.29□□□□□ -0.92
RGPD3-201ENST00000304514 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
RGPD3-201ENST00000304514 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
RGPD3-201ENST00000304514 PMFBP1Q8TBY8 1022 aa9.29□□□□□ -0.92
RGPD3-201ENST00000304514 NBR1Q14596 966 aa9.29□□□□□ -0.92
RGPD3-201ENST00000304514 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.29□□□□□ -0.92
RGPD3-201ENST00000304514 MAPK8IP3Q9UPT6 1336 aa9.29□□□□□ -0.92
RGPD3-201ENST00000304514 IL13P35225 146 aa9.29□□□□□ -0.92
RGPD3-201ENST00000304514 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
RGPD3-201ENST00000304514 DEKP35659 375 aaKnown RBP9.28□□□□□ -0.92
RGPD3-201ENST00000304514 LTN1O94822 1766 aa9.28□□□□□ -0.92
RGPD3-201ENST00000304514 FCHSD2O94868 740 aa9.28□□□□□ -0.92
RGPD3-201ENST00000304514 EXOSC9Q06265 439 aaKnown RBP9.28□□□□□ -0.92
RGPD3-201ENST00000304514 FRAT1Q92837 279 aaPredicted RBP9.28□□□□□ -0.92
RGPD3-201ENST00000304514 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.92
RGPD3-201ENST00000304514 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
RGPD3-201ENST00000304514 CHD2O14647 1828 aaKnown RBP9.27□□□□□ -0.93
RGPD3-201ENST00000304514 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
RGPD3-201ENST00000304514 TRIM27P14373 513 aa9.27□□□□□ -0.93
RGPD3-201ENST00000304514 ZKSCAN2Q63HK3 967 aa9.27□□□□□ -0.93
RGPD3-201ENST00000304514 SEC24BO95487 1268 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 RGS3P49796 1198 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 U2SURPO15042 1029 aaKnown RBP9.26□□□□□ -0.93
RGPD3-201ENST00000304514 RIPK4P57078 832 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 HDAC1Q13547 482 aaPredicted RBP9.26□□□□□ -0.93
RGPD3-201ENST00000304514 PNNQ9H307 717 aaKnown RBP9.26□□□□□ -0.93
RGPD3-201ENST00000304514 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 ALDH1L2Q3SY69 923 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 SSH1Q8WYL5 1049 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 NWD1Q149M9 1564 aa9.26□□□□□ -0.93
RGPD3-201ENST00000304514 USP31Q70CQ4 1352 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 PHRF1Q9P1Y6 1649 aaKnown RBP9.25□□□□□ -0.93
RGPD3-201ENST00000304514 DZIP1LQ8IYY4 767 aaKnown RBP9.25□□□□□ -0.93
RGPD3-201ENST00000304514 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms