RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 USP54Q70EL1 1684 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 ACEP12821 1306 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
CLCC1-201ENST00000302500 CPSF1Q10570 1443 aaKnown RBP16.18■□□□□ 0.18
CLCC1-201ENST00000302500 PSME1Q06323 249 aa16.18■□□□□ 0.18
CLCC1-201ENST00000302500 MEX3CQ5U5Q3 659 aaKnown RBP16.18■□□□□ 0.18
CLCC1-201ENST00000302500 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
CLCC1-201ENST00000302500 COL14A1Q05707 1796 aaKnown RBP16.17■□□□□ 0.18
CLCC1-201ENST00000302500 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
CLCC1-201ENST00000302500 USP6P35125 1406 aa16.16■□□□□ 0.18
CLCC1-201ENST00000302500 TESK2Q96S53 571 aa16.16■□□□□ 0.18
CLCC1-201ENST00000302500 SLIT3O75094 1523 aa16.15■□□□□ 0.18
CLCC1-201ENST00000302500 USP19O94966 1318 aa16.15■□□□□ 0.18
CLCC1-201ENST00000302500 NGLY1Q96IV0 654 aa16.14■□□□□ 0.17
CLCC1-201ENST00000302500 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
CLCC1-201ENST00000302500 COL18A1P39060 1754 aa16.13■□□□□ 0.17
CLCC1-201ENST00000302500 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
CLCC1-201ENST00000302500 QTRT2Q9H974 415 aaKnown RBP16.13■□□□□ 0.17
CLCC1-201ENST00000302500 USP21Q9UK80 565 aa16.13■□□□□ 0.17
CLCC1-201ENST00000302500 RXRBP28702 533 aa16.12■□□□□ 0.17
CLCC1-201ENST00000302500 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
CLCC1-201ENST00000302500 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
CLCC1-201ENST00000302500 CARD11Q9BXL7 1154 aa16.12■□□□□ 0.17
CLCC1-201ENST00000302500 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
CLCC1-201ENST00000302500 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
CLCC1-201ENST00000302500 FAM83GA6ND36 823 aa16.11■□□□□ 0.17
CLCC1-201ENST00000302500 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
CLCC1-201ENST00000302500 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
CLCC1-201ENST00000302500 THSD7AQ9UPZ6 1657 aa16.09■□□□□ 0.17
CLCC1-201ENST00000302500 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
CLCC1-201ENST00000302500 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
CLCC1-201ENST00000302500 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
CLCC1-201ENST00000302500 MYOM1P52179 1685 aa16.09■□□□□ 0.17
CLCC1-201ENST00000302500 CPDO75976 1380 aa16.08■□□□□ 0.16
CLCC1-201ENST00000302500 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
CLCC1-201ENST00000302500 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.16
CLCC1-201ENST00000302500 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
CLCC1-201ENST00000302500 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
CLCC1-201ENST00000302500 NFAT5O94916 1531 aa16.07■□□□□ 0.16
CLCC1-201ENST00000302500 VPS72Q15906 364 aa16.06■□□□□ 0.16
CLCC1-201ENST00000302500 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
CLCC1-201ENST00000302500 KIAA0232Q92628 1395 aa16.05■□□□□ 0.16
CLCC1-201ENST00000302500 USP47Q96K76 1375 aa16.04■□□□□ 0.16
CLCC1-201ENST00000302500 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
CLCC1-201ENST00000302500 UPF1Q92900 1129 aaKnown RBP eCLIP16.04■□□□□ 0.16
CLCC1-201ENST00000302500 RGPD5Q99666 1765 aa16.02■□□□□ 0.16
CLCC1-201ENST00000302500 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
CLCC1-201ENST00000302500 TTC21BQ7Z4L5 1316 aa16.02■□□□□ 0.15
CLCC1-201ENST00000302500 A0A1W2PP64 1363 aa16.02■□□□□ 0.15
CLCC1-201ENST00000302500 USP31Q70CQ4 1352 aa16.02■□□□□ 0.15
CLCC1-201ENST00000302500 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
CLCC1-201ENST00000302500 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
CLCC1-201ENST00000302500 NUTM2GQ5VZR2 741 aa16■□□□□ 0.15
CLCC1-201ENST00000302500 ABTB2Q8N961 1025 aa16■□□□□ 0.15
CLCC1-201ENST00000302500 WNK3Q9BYP7 1800 aa16■□□□□ 0.15
CLCC1-201ENST00000302500 OVOS2A0A0J9YW53 1432 aa16■□□□□ 0.15
CLCC1-201ENST00000302500 OVOS2Q6IE36 1432 aa16■□□□□ 0.15
CLCC1-201ENST00000302500 ABCC6O95255 1503 aa15.99■□□□□ 0.15
CLCC1-201ENST00000302500 GCP02774 474 aa15.99■□□□□ 0.15
CLCC1-201ENST00000302500 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
CLCC1-201ENST00000302500 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
CLCC1-201ENST00000302500 SPATA31A5Q5VU36 1347 aa15.99■□□□□ 0.15
CLCC1-201ENST00000302500 SPATA31A7Q8IWB4 1347 aa15.99■□□□□ 0.15
CLCC1-201ENST00000302500 ADRA2BP18089 450 aa15.98■□□□□ 0.15
CLCC1-201ENST00000302500 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
CLCC1-201ENST00000302500 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
CLCC1-201ENST00000302500 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
CLCC1-201ENST00000302500 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
CLCC1-201ENST00000302500 LTN1O94822 1766 aa15.97■□□□□ 0.15
CLCC1-201ENST00000302500 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
CLCC1-201ENST00000302500 SRCAPQ6ZRS2 3230 aa15.97■□□□□ 0.15
CLCC1-201ENST00000302500 PARP4Q9UKK3 1724 aaKnown RBP15.97■□□□□ 0.15
CLCC1-201ENST00000302500 CHRNA2Q15822 529 aa15.96■□□□□ 0.15
CLCC1-201ENST00000302500 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
CLCC1-201ENST00000302500 AATKQ6ZMQ8 1374 aa15.96■□□□□ 0.15
CLCC1-201ENST00000302500 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
CLCC1-201ENST00000302500 ZC3H6P61129 1189 aaKnown RBP15.95■□□□□ 0.14
CLCC1-201ENST00000302500 PRDM11Q9NQV5 511 aa15.95■□□□□ 0.14
CLCC1-201ENST00000302500 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
CLCC1-201ENST00000302500 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
CLCC1-201ENST00000302500 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
CLCC1-201ENST00000302500 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
CLCC1-201ENST00000302500 PEAK1Q9H792 1746 aa15.93■□□□□ 0.14
CLCC1-201ENST00000302500 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
CLCC1-201ENST00000302500 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
CLCC1-201ENST00000302500 NLRP6P59044 892 aa15.93■□□□□ 0.14
CLCC1-201ENST00000302500 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
CLCC1-201ENST00000302500 SEPT12Q8IYM1 358 aa15.92■□□□□ 0.14
CLCC1-201ENST00000302500 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
CLCC1-201ENST00000302500 NME9Q86XW9 330 aa15.91■□□□□ 0.14
CLCC1-201ENST00000302500 KIF20BQ96Q89 1820 aa15.91■□□□□ 0.14
CLCC1-201ENST00000302500 DISP2A7MBM2 1401 aa15.89■□□□□ 0.13
CLCC1-201ENST00000302500 ANKRD26Q9UPS8 1709 aa15.89■□□□□ 0.13
CLCC1-201ENST00000302500 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
CLCC1-201ENST00000302500 LARP1Q6PKG0 1096 aaKnown RBP15.89■□□□□ 0.13
CLCC1-201ENST00000302500 CRB1P82279 1406 aa15.89■□□□□ 0.13
CLCC1-201ENST00000302500 FAM98CQ17RN3 349 aaKnown RBP15.88■□□□□ 0.13
CLCC1-201ENST00000302500 BARGINQ6ZT62 677 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms