RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
LRRC28-201ENST00000301981 CC2D2AQ9P2K1 1620 aa9.39□□□□□ -0.91
LRRC28-201ENST00000301981 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 ZNF771Q7L3S4 317 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-201ENST00000301981 REC8O95072 547 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 PDE4CQ08493 712 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 CAMK4Q16566 473 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 BICD2Q8TD16 824 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 TOMM22Q9NS69 142 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 SURF6O75683 361 aaKnown RBP9.38□□□□□ -0.91
LRRC28-201ENST00000301981 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
LRRC28-201ENST00000301981 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
LRRC28-201ENST00000301981 C9orf78Q9NZ63 289 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-201ENST00000301981 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
LRRC28-201ENST00000301981 PTMSP20962 102 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 SMC3Q9UQE7 1217 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 GNAI1P63096 354 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 API5Q9BZZ5 524 aaKnown RBP9.37□□□□□ -0.91
LRRC28-201ENST00000301981 HECW1Q76N89 1606 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 CHMP4CQ96CF2 233 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 ZRANB1Q9UGI0 708 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 TBC1D32Q96NH3 1257 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 DNAJC5Q9H3Z4 198 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
LRRC28-201ENST00000301981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.91
LRRC28-201ENST00000301981 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
LRRC28-201ENST00000301981 KDM6BO15054 1643 aa9.36□□□□□ -0.91
LRRC28-201ENST00000301981 NUCB2P80303 420 aa9.36□□□□□ -0.91
LRRC28-201ENST00000301981 CWC27Q6UX04 472 aaKnown RBP9.36□□□□□ -0.91
LRRC28-201ENST00000301981 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-201ENST00000301981 NME9Q86XW9 330 aa9.36□□□□□ -0.91
LRRC28-201ENST00000301981 USHBP1Q8N6Y0 703 aa9.36□□□□□ -0.91
LRRC28-201ENST00000301981 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-201ENST00000301981 GOLGA6L6A8MZA4 724 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 LMOD3Q0VAK6 560 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
LRRC28-201ENST00000301981 ZHX1Q9UKY1 873 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-201ENST00000301981 PLEKHH2Q8IVE3 1493 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-201ENST00000301981 SF3A1Q15459 793 aaKnown RBP9.35□□□□□ -0.91
LRRC28-201ENST00000301981 SKIDA1Q1XH10 827 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 FAM184AQ8NB25 1140 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 TESK2Q96S53 571 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 CBX1P83916 185 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
LRRC28-201ENST00000301981 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
LRRC28-201ENST00000301981 GRIN2BQ13224 1484 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 IGSF3O75054 1194 aa9.35□□□□□ -0.91
LRRC28-201ENST00000301981 TSPYL6Q8N831 410 aa9.34□□□□□ -0.91
LRRC28-201ENST00000301981 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.91
LRRC28-201ENST00000301981 WDR63Q8IWG1 891 aa9.34□□□□□ -0.91
LRRC28-201ENST00000301981 TSPY26PQ9H489 355 aa9.34□□□□□ -0.91
LRRC28-201ENST00000301981 BECN2A8MW95 431 aa9.34□□□□□ -0.91
LRRC28-201ENST00000301981 PHF14O94880 888 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 JARID2Q92833 1246 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 CCDC173Q0VFZ6 552 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 GOLGA6L19H0YKK7 550 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 UBTFL1P0CB47 393 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 ZGPATQ8N5A5 531 aaKnown RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 OTUD7AQ8TE49 926 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 NCKAP5LQ9HCH0 1330 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 ROCK1Q13464 1354 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 ANXA1P04083 346 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 NEUROD6Q96NK8 337 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 ABCA10Q8WWZ4 1543 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 PES1O00541 588 aaKnown RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 TEFQ10587 303 aa9.33□□□□□ -0.92
LRRC28-201ENST00000301981 FBXO31Q5XUX0 539 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-201ENST00000301981 TTLL5Q6EMB2 1281 aa9.32□□□□□ -0.92
LRRC28-201ENST00000301981 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
LRRC28-201ENST00000301981 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
LRRC28-201ENST00000301981 FAM177A1Q8N128 213 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-201ENST00000301981 TAF7LQ5H9L4 462 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-201ENST00000301981 SLC26A8Q96RN1 970 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 TRIM5Q9C035 493 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 NLRP6P59044 892 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 RABEP1Q15276 862 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 PARD3Q8TEW0 1356 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 C17orf53Q8N3J3 647 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-201ENST00000301981 TMX1Q9H3N1 280 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 ERC2O15083 957 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 CCDC39Q9UFE4 941 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
LRRC28-201ENST00000301981 IQGAP2Q13576 1575 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms