RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
SCARA3-201ENST00000301904 ZBTB9Q96C00 473 aa12.86□□□□□ -0.35
SCARA3-201ENST00000301904 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
SCARA3-201ENST00000301904 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
SCARA3-201ENST00000301904 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
SCARA3-201ENST00000301904 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
SCARA3-201ENST00000301904 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
SCARA3-201ENST00000301904 DYNC1I1O14576 645 aa12.85□□□□□ -0.35
SCARA3-201ENST00000301904 ZNF500O60304 480 aaPredicted RBP12.85□□□□□ -0.35
SCARA3-201ENST00000301904 BRD2P25440 801 aaKnown RBP12.85□□□□□ -0.35
SCARA3-201ENST00000301904 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
SCARA3-201ENST00000301904 TMEM63CQ9P1W3 806 aa12.85□□□□□ -0.35
SCARA3-201ENST00000301904 ZSCAN20P17040 1043 aaPredicted RBP12.85□□□□□ -0.35
SCARA3-201ENST00000301904 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
SCARA3-201ENST00000301904 DDX19BQ9UMR2 479 aa12.85□□□□□ -0.35
SCARA3-201ENST00000301904 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
SCARA3-201ENST00000301904 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
SCARA3-201ENST00000301904 KCNJ4P48050 445 aa12.84□□□□□ -0.35
SCARA3-201ENST00000301904 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
SCARA3-201ENST00000301904 PRDM15P57071 1507 aaPredicted RBP12.84□□□□□ -0.35
SCARA3-201ENST00000301904 NUCB1Q02818 461 aa12.84□□□□□ -0.35
SCARA3-201ENST00000301904 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
SCARA3-201ENST00000301904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCARA3-201ENST00000301904 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
SCARA3-201ENST00000301904 ZNF445P59923 1031 aa12.83□□□□□ -0.36
SCARA3-201ENST00000301904 DMTNQ08495 405 aa12.83□□□□□ -0.36
SCARA3-201ENST00000301904 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
SCARA3-201ENST00000301904 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
SCARA3-201ENST00000301904 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
SCARA3-201ENST00000301904 WDR63Q8IWG1 891 aa12.82□□□□□ -0.36
SCARA3-201ENST00000301904 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
SCARA3-201ENST00000301904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
SCARA3-201ENST00000301904 PTMSP20962 102 aa12.82□□□□□ -0.36
SCARA3-201ENST00000301904 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
SCARA3-201ENST00000301904 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
SCARA3-201ENST00000301904 PDLIM2Q96JY6 352 aa12.81□□□□□ -0.36
SCARA3-201ENST00000301904 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
SCARA3-201ENST00000301904 DTNBO60941 627 aa12.81□□□□□ -0.36
SCARA3-201ENST00000301904 TERF1P54274 439 aa12.81□□□□□ -0.36
SCARA3-201ENST00000301904 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
SCARA3-201ENST00000301904 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
SCARA3-201ENST00000301904 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
SCARA3-201ENST00000301904 CHGAP10645 457 aaKnown RBP12.8□□□□□ -0.36
SCARA3-201ENST00000301904 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
SCARA3-201ENST00000301904 TRAK1Q9UPV9 953 aa12.8□□□□□ -0.36
SCARA3-201ENST00000301904 CLASP1Q7Z460 1538 aa12.79□□□□□ -0.36
SCARA3-201ENST00000301904 KIAA2012Q0VF49 1180 aa12.79□□□□□ -0.36
SCARA3-201ENST00000301904 ATAD2Q6PL18 1390 aa12.79□□□□□ -0.36
SCARA3-201ENST00000301904 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
SCARA3-201ENST00000301904 MTERF4Q7Z6M4 381 aaKnown RBP12.79□□□□□ -0.36
SCARA3-201ENST00000301904 RAPGEF6Q8TEU7 1601 aa12.79□□□□□ -0.36
SCARA3-201ENST00000301904 SAFB2Q14151 953 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCARA3-201ENST00000301904 PTPRGP23470 1445 aa12.78□□□□□ -0.36
SCARA3-201ENST00000301904 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
SCARA3-201ENST00000301904 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
SCARA3-201ENST00000301904 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
SCARA3-201ENST00000301904 USP25Q9UHP3 1055 aa12.78□□□□□ -0.36
SCARA3-201ENST00000301904 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCARA3-201ENST00000301904 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.36
SCARA3-201ENST00000301904 NUCB2P80303 420 aa12.77□□□□□ -0.37
SCARA3-201ENST00000301904 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
SCARA3-201ENST00000301904 THUMPD2Q9BTF0 503 aaKnown RBP12.77□□□□□ -0.37
SCARA3-201ENST00000301904 TMEM51Q9NW97 253 aa12.77□□□□□ -0.37
SCARA3-201ENST00000301904 HS1BP3Q53T59 392 aa12.76□□□□□ -0.37
SCARA3-201ENST00000301904 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
SCARA3-201ENST00000301904 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
SCARA3-201ENST00000301904 GSPT1P15170 499 aaKnown RBP12.76□□□□□ -0.37
SCARA3-201ENST00000301904 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
SCARA3-201ENST00000301904 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
SCARA3-201ENST00000301904 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
SCARA3-201ENST00000301904 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
SCARA3-201ENST00000301904 ERICH4A6NGS2 130 aa12.75□□□□□ -0.37
SCARA3-201ENST00000301904 CDC45O75419 566 aa12.75□□□□□ -0.37
SCARA3-201ENST00000301904 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
SCARA3-201ENST00000301904 SMARCA5O60264 1052 aaPredicted RBP12.75□□□□□ -0.37
SCARA3-201ENST00000301904 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCARA3-201ENST00000301904 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
SCARA3-201ENST00000301904 GADD45BO75293 160 aaPredicted RBP12.74□□□□□ -0.37
SCARA3-201ENST00000301904 NUTM2DQ5VT03 806 aaPredicted RBP12.74□□□□□ -0.37
SCARA3-201ENST00000301904 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
SCARA3-201ENST00000301904 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
SCARA3-201ENST00000301904 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
SCARA3-201ENST00000301904 POLR3AO14802 1390 aaPredicted RBP12.74□□□□□ -0.37
SCARA3-201ENST00000301904 TSPY26PQ9H489 355 aa12.74□□□□□ -0.37
SCARA3-201ENST00000301904 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
SCARA3-201ENST00000301904 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
SCARA3-201ENST00000301904 SIRT2Q8IXJ6 389 aa12.73□□□□□ -0.37
SCARA3-201ENST00000301904 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
SCARA3-201ENST00000301904 CCDC141Q6ZP82 1450 aa12.73□□□□□ -0.37
SCARA3-201ENST00000301904 CROCC2H7BZ55 1655 aa12.73□□□□□ -0.37
SCARA3-201ENST00000301904 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
SCARA3-201ENST00000301904 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
SCARA3-201ENST00000301904 FBLN1P23142 703 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 CNPY4Q8N129 248 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
SCARA3-201ENST00000301904 RABEP1Q15276 862 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 KIF3AQ9Y496 699 aa12.72□□□□□ -0.37
SCARA3-201ENST00000301904 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms