RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 ZNF521Q96K83 1311 aa14.37□□□□□ -0.11
ERCC1-202ENST00000300853 KIF3BO15066 747 aa14.37□□□□□ -0.11
ERCC1-202ENST00000300853 HAP1P54257 671 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-202ENST00000300853 NUCB1Q02818 461 aa14.36□□□□□ -0.11
ERCC1-202ENST00000300853 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
ERCC1-202ENST00000300853 TTC12Q9H892 705 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-202ENST00000300853 NOLC1Q14978 699 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERCC1-202ENST00000300853 GGNBP2Q9H3C7 697 aa14.36□□□□□ -0.11
ERCC1-202ENST00000300853 FAM184AQ8NB25 1140 aa14.36□□□□□ -0.11
ERCC1-202ENST00000300853 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 ZNF445P59923 1031 aa14.35□□□□□ -0.11
ERCC1-202ENST00000300853 NUTM2DQ5VT03 806 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
ERCC1-202ENST00000300853 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 GTPBP4Q9BZE4 634 aaKnown RBP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-202ENST00000300853 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
ERCC1-202ENST00000300853 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
ERCC1-202ENST00000300853 LETM1O95202 739 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-202ENST00000300853 TPM3P06753 285 aa14.34□□□□□ -0.11
ERCC1-202ENST00000300853 TAF3Q5VWG9 929 aa14.34□□□□□ -0.11
ERCC1-202ENST00000300853 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
ERCC1-202ENST00000300853 VPS37CA5D8V6 355 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-202ENST00000300853 ERICH4A6NGS2 130 aa14.34□□□□□ -0.11
ERCC1-202ENST00000300853 HDGFL2Q7Z4V5 671 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-202ENST00000300853 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
ERCC1-202ENST00000300853 MAGI3Q5TCQ9 1506 aa14.34□□□□□ -0.11
ERCC1-202ENST00000300853 NPHP1O15259 732 aa14.33□□□□□ -0.11
ERCC1-202ENST00000300853 ADCY5O95622 1261 aa14.33□□□□□ -0.11
ERCC1-202ENST00000300853 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.11
ERCC1-202ENST00000300853 KIAA0586Q9BVV6 1533 aa14.33□□□□□ -0.12
ERCC1-202ENST00000300853 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
ERCC1-202ENST00000300853 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.12
ERCC1-202ENST00000300853 ERC2O15083 957 aa14.33□□□□□ -0.12
ERCC1-202ENST00000300853 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
ERCC1-202ENST00000300853 MCM2P49736 904 aa14.33□□□□□ -0.12
ERCC1-202ENST00000300853 ZGPATQ8N5A5 531 aaKnown RBP14.32□□□□□ -0.12
ERCC1-202ENST00000300853 CCDC112Q8NEF3 446 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 SMC3Q9UQE7 1217 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 GOLGA6L19H0YKK7 550 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 ASXL1Q8IXJ9 1541 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 FGD1P98174 961 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
ERCC1-202ENST00000300853 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
ERCC1-202ENST00000300853 SPAG9O60271 1321 aaKnown RBP14.31□□□□□ -0.12
ERCC1-202ENST00000300853 MYRIPQ8NFW9 859 aa14.31□□□□□ -0.12
ERCC1-202ENST00000300853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.31□□□□□ -0.12
ERCC1-202ENST00000300853 HMOX1P09601 288 aa14.31□□□□□ -0.12
ERCC1-202ENST00000300853 CTTNBP2Q8WZ74 1663 aa14.31□□□□□ -0.12
ERCC1-202ENST00000300853 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
ERCC1-202ENST00000300853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERCC1-202ENST00000300853 C17orf53Q8N3J3 647 aaPredicted RBP14.3□□□□□ -0.12
ERCC1-202ENST00000300853 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
ERCC1-202ENST00000300853 WDR33Q9C0J8 1336 aaKnown RBP14.3□□□□□ -0.12
ERCC1-202ENST00000300853 KIF20AO95235 890 aa14.3□□□□□ -0.12
ERCC1-202ENST00000300853 TMEM132EQ6IEE7 984 aa14.3□□□□□ -0.12
ERCC1-202ENST00000300853 EVC2Q86UK5 1308 aa14.3□□□□□ -0.12
ERCC1-202ENST00000300853 BECN2A8MW95 431 aa14.29□□□□□ -0.12
ERCC1-202ENST00000300853 CD2BP2O95400 341 aaKnown RBP14.29□□□□□ -0.12
ERCC1-202ENST00000300853 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
ERCC1-202ENST00000300853 GNAI1P63096 354 aa14.29□□□□□ -0.12
ERCC1-202ENST00000300853 TRERF1Q96PN7 1200 aa14.29□□□□□ -0.12
ERCC1-202ENST00000300853 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
ERCC1-202ENST00000300853 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
ERCC1-202ENST00000300853 IQGAP2Q13576 1575 aa14.28□□□□□ -0.12
ERCC1-202ENST00000300853 DMTNQ08495 405 aa14.28□□□□□ -0.12
ERCC1-202ENST00000300853 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
ERCC1-202ENST00000300853 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
ERCC1-202ENST00000300853 ZBTB40Q9NUA8 1239 aa14.28□□□□□ -0.12
ERCC1-202ENST00000300853 TAOK2Q9UL54 1235 aa14.28□□□□□ -0.12
ERCC1-202ENST00000300853 PRKAR2BP31323 418 aa14.27□□□□□ -0.12
ERCC1-202ENST00000300853 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.12
ERCC1-202ENST00000300853 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-202ENST00000300853 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.13
ERCC1-202ENST00000300853 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
ERCC1-202ENST00000300853 DNMT1P26358 1616 aaKnown RBP14.27□□□□□ -0.13
ERCC1-202ENST00000300853 GPATCH8Q9UKJ3 1502 aaKnown RBP14.27□□□□□ -0.13
ERCC1-202ENST00000300853 CCDC192P0DO97 292 aa14.27□□□□□ -0.13
ERCC1-202ENST00000300853 TWISTNBQ3B726 338 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-202ENST00000300853 MBD5Q9P267 1494 aa14.27□□□□□ -0.13
ERCC1-202ENST00000300853 BICD2Q8TD16 824 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 ZMYM3Q14202 1370 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 SOX12O15370 315 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 U2AF2P26368 475 aaKnown RBP eCLIP14.26□□□□□ -0.13
ERCC1-202ENST00000300853 PKP1Q13835 747 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 TEX35Q5T0J7 233 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 GGT6Q6P531 493 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 CHAMP1Q96JM3 812 aa14.26□□□□□ -0.13
ERCC1-202ENST00000300853 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
ERCC1-202ENST00000300853 CARD14Q9BXL6 1004 aa14.25□□□□□ -0.13
ERCC1-202ENST00000300853 VGLL3A8MV65 326 aa14.24□□□□□ -0.13
ERCC1-202ENST00000300853 TMX3Q96JJ7 454 aa14.24□□□□□ -0.13
ERCC1-202ENST00000300853 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
ERCC1-202ENST00000300853 UVSSAQ2YD98 709 aa14.24□□□□□ -0.13
ERCC1-202ENST00000300853 PIBF1Q8WXW3 757 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms