RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LMBRD1Q9NUN5 540 aa13.56□□□□□ -0.24
SNX20-201ENST00000300590 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
SNX20-201ENST00000300590 ZGPATQ8N5A5 531 aaKnown RBP13.56□□□□□ -0.24
SNX20-201ENST00000300590 CBX1P83916 185 aa13.55□□□□□ -0.24
SNX20-201ENST00000300590 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
SNX20-201ENST00000300590 KIF16BQ96L93 1317 aa13.55□□□□□ -0.24
SNX20-201ENST00000300590 BMP2KLQ5H9B9 411 aa13.55□□□□□ -0.24
SNX20-201ENST00000300590 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
SNX20-201ENST00000300590 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
SNX20-201ENST00000300590 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
SNX20-201ENST00000300590 ZNF445P59923 1031 aa13.54□□□□□ -0.24
SNX20-201ENST00000300590 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX20-201ENST00000300590 PHF23Q9BUL5 403 aaPredicted RBP13.54□□□□□ -0.24
SNX20-201ENST00000300590 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
SNX20-201ENST00000300590 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
SNX20-201ENST00000300590 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
SNX20-201ENST00000300590 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
SNX20-201ENST00000300590 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
SNX20-201ENST00000300590 DYNC1I1O14576 645 aa13.53□□□□□ -0.24
SNX20-201ENST00000300590 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
SNX20-201ENST00000300590 TERF1P54274 439 aa13.53□□□□□ -0.24
SNX20-201ENST00000300590 NOL8Q76FK4 1167 aaKnown RBP13.53□□□□□ -0.24
SNX20-201ENST00000300590 SYNMO15061 1565 aa13.53□□□□□ -0.24
SNX20-201ENST00000300590 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.24
SNX20-201ENST00000300590 TMEM63CQ9P1W3 806 aa13.52□□□□□ -0.24
SNX20-201ENST00000300590 NUCB2P80303 420 aa13.52□□□□□ -0.24
SNX20-201ENST00000300590 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.24
SNX20-201ENST00000300590 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.24
SNX20-201ENST00000300590 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
SNX20-201ENST00000300590 TMPOP42166 694 aaKnown RBP13.52□□□□□ -0.25
SNX20-201ENST00000300590 C17orf53Q8N3J3 647 aaPredicted RBP13.52□□□□□ -0.25
SNX20-201ENST00000300590 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.25
SNX20-201ENST00000300590 IGSF3O75054 1194 aa13.51□□□□□ -0.25
SNX20-201ENST00000300590 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
SNX20-201ENST00000300590 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
SNX20-201ENST00000300590 GRIN2AQ12879 1464 aa13.51□□□□□ -0.25
SNX20-201ENST00000300590 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
SNX20-201ENST00000300590 CCDC27Q2M243 656 aa13.5□□□□□ -0.25
SNX20-201ENST00000300590 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
SNX20-201ENST00000300590 CDC45O75419 566 aa13.5□□□□□ -0.25
SNX20-201ENST00000300590 HS1BP3Q53T59 392 aa13.5□□□□□ -0.25
SNX20-201ENST00000300590 C16orf71Q8IYS4 520 aaPredicted RBP13.5□□□□□ -0.25
SNX20-201ENST00000300590 LAMC1P11047 1609 aa13.49□□□□□ -0.25
SNX20-201ENST00000300590 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
SNX20-201ENST00000300590 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
SNX20-201ENST00000300590 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
SNX20-201ENST00000300590 NUTM2DQ5VT03 806 aaPredicted RBP13.49□□□□□ -0.25
SNX20-201ENST00000300590 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
SNX20-201ENST00000300590 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
SNX20-201ENST00000300590 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
SNX20-201ENST00000300590 LRSAM1Q6UWE0 723 aa13.48□□□□□ -0.25
SNX20-201ENST00000300590 MTERF4Q7Z6M4 381 aaKnown RBP13.48□□□□□ -0.25
SNX20-201ENST00000300590 GDPD2Q9HCC8 539 aa13.48□□□□□ -0.25
SNX20-201ENST00000300590 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNX20-201ENST00000300590 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
SNX20-201ENST00000300590 RABEP1Q15276 862 aa13.47□□□□□ -0.25
SNX20-201ENST00000300590 CCDC94Q9BW85 323 aaPredicted RBP13.47□□□□□ -0.25
SNX20-201ENST00000300590 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
SNX20-201ENST00000300590 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
SNX20-201ENST00000300590 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
SNX20-201ENST00000300590 ARHGAP5Q13017 1502 aa13.47□□□□□ -0.25
SNX20-201ENST00000300590 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
SNX20-201ENST00000300590 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
SNX20-201ENST00000300590 TTC12Q9H892 705 aaPredicted RBP13.46□□□□□ -0.25
SNX20-201ENST00000300590 ZDHHC9Q9Y397 364 aa13.46□□□□□ -0.26
SNX20-201ENST00000300590 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
SNX20-201ENST00000300590 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
SNX20-201ENST00000300590 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
SNX20-201ENST00000300590 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
SNX20-201ENST00000300590 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
SNX20-201ENST00000300590 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
SNX20-201ENST00000300590 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
SNX20-201ENST00000300590 CLEC17AQ6ZS10 378 aa13.45□□□□□ -0.26
SNX20-201ENST00000300590 ST18O60284 1047 aa13.44□□□□□ -0.26
SNX20-201ENST00000300590 CT47B1P0C2W7 299 aaPredicted RBP13.44□□□□□ -0.26
SNX20-201ENST00000300590 ZSCAN20P17040 1043 aaPredicted RBP13.44□□□□□ -0.26
SNX20-201ENST00000300590 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
SNX20-201ENST00000300590 KIF3BO15066 747 aa13.44□□□□□ -0.26
SNX20-201ENST00000300590 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
SNX20-201ENST00000300590 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
SNX20-201ENST00000300590 CHMP4BQ9H444 224 aaKnown RBP13.43□□□□□ -0.26
SNX20-201ENST00000300590 USP25Q9UHP3 1055 aa13.43□□□□□ -0.26
SNX20-201ENST00000300590 MYOM1P52179 1685 aa13.43□□□□□ -0.26
SNX20-201ENST00000300590 FBLN1P23142 703 aa13.43□□□□□ -0.26
SNX20-201ENST00000300590 DMTNQ08495 405 aa13.43□□□□□ -0.26
SNX20-201ENST00000300590 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
SNX20-201ENST00000300590 USP26Q9BXU7 913 aa13.43□□□□□ -0.26
SNX20-201ENST00000300590 PDIA4P13667 645 aaKnown RBP13.42□□□□□ -0.26
SNX20-201ENST00000300590 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
SNX20-201ENST00000300590 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 CYP2E1P05181 493 aaPredicted RBP13.42□□□□□ -0.26
SNX20-201ENST00000300590 MCM5P33992 734 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 NEK4P51957 841 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
SNX20-201ENST00000300590 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms