RNA–Protein interactions for RNA: ENST00000299506.2

TUB-201, Transcript of tubby bipartite transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUB, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUB-201ENST00000299506 NME9Q86XW9 330 aa28.96■■■□□ 2.23
TUB-201ENST00000299506 TTC21BQ7Z4L5 1316 aa28.95■■■□□ 2.23
TUB-201ENST00000299506 LRRC7Q96NW7 1537 aa28.95■■■□□ 2.22
TUB-201ENST00000299506 PHF8Q9UPP1 1060 aa28.94■■■□□ 2.22
TUB-201ENST00000299506 HNRNPUQ00839 825 aaKnown RBP eCLIP28.93■■■□□ 2.22
TUB-201ENST00000299506 ESCO1Q5FWF5 840 aa28.91■■■□□ 2.22
TUB-201ENST00000299506 ATF3P18847 181 aa28.91■■■□□ 2.22
TUB-201ENST00000299506 MSH6P52701 1360 aa28.91■■■□□ 2.22
TUB-201ENST00000299506 C1orf167Q5SNV9 1468 aa28.91■■■□□ 2.22
TUB-201ENST00000299506 KIF1AQ12756 1690 aa28.9■■■□□ 2.22
TUB-201ENST00000299506 TTC21AQ8NDW8 1320 aa28.9■■■□□ 2.22
TUB-201ENST00000299506 MST1RQ04912 1400 aa28.89■■■□□ 2.22
TUB-201ENST00000299506 MTHFSP49914 203 aa28.88■■■□□ 2.21
TUB-201ENST00000299506 COG3Q96JB2 828 aa28.88■■■□□ 2.21
TUB-201ENST00000299506 ZRANB1Q9UGI0 708 aa28.88■■■□□ 2.21
TUB-201ENST00000299506 PIK3C2AO00443 1686 aa28.88■■■□□ 2.21
TUB-201ENST00000299506 OVOS2A0A0J9YW53 1432 aa28.87■■■□□ 2.21
TUB-201ENST00000299506 OVOS2Q6IE36 1432 aa28.87■■■□□ 2.21
TUB-201ENST00000299506 SCAF1Q9H7N4 1312 aaKnown RBP28.87■■■□□ 2.21
TUB-201ENST00000299506 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
TUB-201ENST00000299506 CADPS2Q86UW7 1296 aa28.86■■■□□ 2.21
TUB-201ENST00000299506 ORAI2Q96SN7 254 aa28.86■■■□□ 2.21
TUB-201ENST00000299506 MAP2P11137 1827 aaKnown RBP28.85■■■□□ 2.21
TUB-201ENST00000299506 WDR43Q15061 677 aaKnown RBP eCLIP28.84■■■□□ 2.21
TUB-201ENST00000299506 INSRP06213 1382 aa28.83■■■□□ 2.21
TUB-201ENST00000299506 CFAP53Q96M91 514 aa28.82■■■□□ 2.2
TUB-201ENST00000299506 BLMP54132 1417 aaPredicted RBP28.81■■■□□ 2.2
TUB-201ENST00000299506 USP54Q70EL1 1684 aa28.81■■■□□ 2.2
TUB-201ENST00000299506 AATKQ6ZMQ8 1374 aa28.81■■■□□ 2.2
TUB-201ENST00000299506 USP31Q70CQ4 1352 aa28.79■■■□□ 2.2
TUB-201ENST00000299506 ADAMTS8Q9UP79 889 aa28.79■■■□□ 2.2
TUB-201ENST00000299506 MARF1Q9Y4F3 1742 aaKnown RBP28.78■■■□□ 2.2
TUB-201ENST00000299506 PSME1Q06323 249 aa28.78■■■□□ 2.2
TUB-201ENST00000299506 SMG6Q86US8 1419 aaKnown RBP28.78■■■□□ 2.2
TUB-201ENST00000299506 COL3A1P02461 1466 aaPredicted RBP28.77■■■□□ 2.2
TUB-201ENST00000299506 PAK3O75914 559 aaPredicted RBP28.76■■■□□ 2.19
TUB-201ENST00000299506 FOXO3O43524 673 aa28.76■■■□□ 2.19
TUB-201ENST00000299506 FBLN1P23142 703 aa28.76■■■□□ 2.19
TUB-201ENST00000299506 POLKQ9UBT6 870 aa28.76■■■□□ 2.19
TUB-201ENST00000299506 ZBED9Q6R2W3 1325 aa28.75■■■□□ 2.19
TUB-201ENST00000299506 TRPM3Q9HCF6 1732 aaPredicted RBP28.75■■■□□ 2.19
TUB-201ENST00000299506 CDK12Q9NYV4 1490 aaPredicted RBP28.73■■■□□ 2.19
TUB-201ENST00000299506 PNPLA6Q8IY17 1366 aa28.73■■■□□ 2.19
TUB-201ENST00000299506 ABTB2Q8N961 1025 aa28.72■■■□□ 2.19
TUB-201ENST00000299506 NLRP6P59044 892 aa28.71■■■□□ 2.19
TUB-201ENST00000299506 EMILIN1Q9Y6C2 1016 aa28.71■■■□□ 2.19
TUB-201ENST00000299506 PPM1GO15355 546 aaPredicted RBP28.69■■■□□ 2.18
TUB-201ENST00000299506 XPCQ01831 940 aaPredicted RBP28.69■■■□□ 2.18
TUB-201ENST00000299506 RRS1Q15050 365 aaKnown RBP28.69■■■□□ 2.18
TUB-201ENST00000299506 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
TUB-201ENST00000299506 NUTM2GQ5VZR2 741 aa28.67■■■□□ 2.18
TUB-201ENST00000299506 KRT28Q7Z3Y7 464 aa28.67■■■□□ 2.18
TUB-201ENST00000299506 SENP3-EIF4A1A0A087X0R7 540 aa28.66■■■□□ 2.18
TUB-201ENST00000299506 PEAK1Q9H792 1746 aa28.65■■■□□ 2.18
TUB-201ENST00000299506 ALS2Q96Q42 1657 aa28.65■■■□□ 2.18
TUB-201ENST00000299506 SOX12O15370 315 aa28.64■■■□□ 2.18
TUB-201ENST00000299506 DIAPH1O60610 1272 aaKnown RBP28.64■■■□□ 2.18
TUB-201ENST00000299506 NUDCQ9Y266 331 aa28.64■■■□□ 2.18
TUB-201ENST00000299506 NPHP3Q7Z494 1330 aa28.64■■■□□ 2.18
TUB-201ENST00000299506 SLAIN2Q9P270 581 aa28.64■■■□□ 2.17
TUB-201ENST00000299506 BRINP3Q76B58 766 aa28.62■■■□□ 2.17
TUB-201ENST00000299506 CCDC146Q8IYE0 955 aa28.61■■■□□ 2.17
TUB-201ENST00000299506 PXDNQ92626 1479 aa28.61■■■□□ 2.17
TUB-201ENST00000299506 DDX17Q92841 729 aaKnown RBP28.6■■■□□ 2.17
TUB-201ENST00000299506 U2AF1L5P0DN76 240 aaPredicted RBP28.6■■■□□ 2.17
TUB-201ENST00000299506 U2AF1Q01081 240 aaKnown RBP eCLIP28.6■■■□□ 2.17
TUB-201ENST00000299506 U2SURPO15042 1029 aaKnown RBP28.59■■■□□ 2.17
TUB-201ENST00000299506 MAP3K19Q56UN5 1328 aa28.58■■■□□ 2.17
TUB-201ENST00000299506 NFAT5O94916 1531 aa28.58■■■□□ 2.17
TUB-201ENST00000299506 SBNO1A3KN83 1393 aa28.58■■■□□ 2.17
TUB-201ENST00000299506 LTN1O94822 1766 aa28.57■■■□□ 2.16
TUB-201ENST00000299506 SLIT3O75094 1523 aa28.57■■■□□ 2.16
TUB-201ENST00000299506 LMOD2Q6P5Q4 547 aa28.56■■■□□ 2.16
TUB-201ENST00000299506 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
TUB-201ENST00000299506 SALL2Q9Y467 1007 aaPredicted RBP28.55■■■□□ 2.16
TUB-201ENST00000299506 FLT4P35916 1363 aa28.55■■■□□ 2.16
TUB-201ENST00000299506 TNS3Q68CZ2 1445 aa28.54■■■□□ 2.16
TUB-201ENST00000299506 IL13P35225 146 aa28.53■■■□□ 2.16
TUB-201ENST00000299506 KIF24Q5T7B8 1368 aa28.53■■■□□ 2.16
TUB-201ENST00000299506 NHSL1Q5SYE7 1610 aa28.52■■■□□ 2.16
TUB-201ENST00000299506 IQSEC2Q5JU85 1478 aa28.52■■■□□ 2.16
TUB-201ENST00000299506 USP19O94966 1318 aa28.52■■■□□ 2.16
TUB-201ENST00000299506 KCNH5Q8NCM2 988 aa28.52■■■□□ 2.16
TUB-201ENST00000299506 RUNDC1Q96C34 613 aa28.52■■■□□ 2.16
TUB-201ENST00000299506 APAF1O14727 1248 aa28.52■■■□□ 2.16
TUB-201ENST00000299506 PHRF1Q9P1Y6 1649 aaKnown RBP28.5■■■□□ 2.15
TUB-201ENST00000299506 AMPHP49418 695 aa28.5■■■□□ 2.15
TUB-201ENST00000299506 HSP90AB2PQ58FF8 381 aa28.5■■■□□ 2.15
TUB-201ENST00000299506 MED1Q15648 1581 aaPredicted RBP28.49■■■□□ 2.15
TUB-201ENST00000299506 RTL1A6NKG5 1358 aa28.49■■■□□ 2.15
TUB-201ENST00000299506 EIF4A2Q14240 407 aaKnown RBP28.48■■■□□ 2.15
TUB-201ENST00000299506 RGPD1P0DJD0 1748 aa28.48■■■□□ 2.15
TUB-201ENST00000299506 SPATA31A3Q5VYP0 1347 aa28.48■■■□□ 2.15
TUB-201ENST00000299506 ARHGEF10O15013 1369 aa28.46■■■□□ 2.15
TUB-201ENST00000299506 GCP02774 474 aa28.46■■■□□ 2.15
TUB-201ENST00000299506 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
TUB-201ENST00000299506 SOS2Q07890 1332 aaPredicted RBP28.46■■■□□ 2.15
TUB-201ENST00000299506 ROBO1Q9Y6N7 1651 aa28.45■■■□□ 2.15
TUB-201ENST00000299506 HOXC9P31274 260 aa28.45■■■□□ 2.14
TUB-201ENST00000299506 PLEKHF1Q96S99 279 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms