RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 MTHFSP49914 203 aa24.8■■□□□ 1.56
SEC61A2-201ENST00000298428 WDR43Q15061 677 aaKnown RBP eCLIP24.79■■□□□ 1.56
SEC61A2-201ENST00000298428 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
SEC61A2-201ENST00000298428 ZNF335Q9H4Z2 1342 aaPredicted RBP24.79■■□□□ 1.56
SEC61A2-201ENST00000298428 COG3Q96JB2 828 aa24.79■■□□□ 1.56
SEC61A2-201ENST00000298428 DCCP43146 1447 aa24.78■■□□□ 1.56
SEC61A2-201ENST00000298428 ESCO1Q5FWF5 840 aa24.78■■□□□ 1.56
SEC61A2-201ENST00000298428 ZRANB1Q9UGI0 708 aa24.78■■□□□ 1.56
SEC61A2-201ENST00000298428 INSRP06213 1382 aa24.77■■□□□ 1.56
SEC61A2-201ENST00000298428 TTC21AQ8NDW8 1320 aa24.77■■□□□ 1.56
SEC61A2-201ENST00000298428 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
SEC61A2-201ENST00000298428 ATF3P18847 181 aa24.76■■□□□ 1.55
SEC61A2-201ENST00000298428 CFAP53Q96M91 514 aa24.76■■□□□ 1.55
SEC61A2-201ENST00000298428 ADAMTS8Q9UP79 889 aa24.75■■□□□ 1.55
SEC61A2-201ENST00000298428 LRRC7Q96NW7 1537 aa24.74■■□□□ 1.55
SEC61A2-201ENST00000298428 ZBED9Q6R2W3 1325 aa24.74■■□□□ 1.55
SEC61A2-201ENST00000298428 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
SEC61A2-201ENST00000298428 BLMP54132 1417 aaPredicted RBP24.74■■□□□ 1.55
SEC61A2-201ENST00000298428 MSH6P52701 1360 aa24.74■■□□□ 1.55
SEC61A2-201ENST00000298428 OVOS2A0A0J9YW53 1432 aa24.73■■□□□ 1.55
SEC61A2-201ENST00000298428 OVOS2Q6IE36 1432 aa24.73■■□□□ 1.55
SEC61A2-201ENST00000298428 XIRP1Q702N8 1843 aaKnown RBP24.73■■□□□ 1.55
SEC61A2-201ENST00000298428 ORAI2Q96SN7 254 aa24.72■■□□□ 1.55
SEC61A2-201ENST00000298428 MST1RQ04912 1400 aa24.71■■□□□ 1.55
SEC61A2-201ENST00000298428 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
SEC61A2-201ENST00000298428 SHPRHQ149N8 1683 aa24.71■■□□□ 1.55
SEC61A2-201ENST00000298428 AATKQ6ZMQ8 1374 aa24.7■■□□□ 1.55
SEC61A2-201ENST00000298428 PIK3C2AO00443 1686 aa24.69■■□□□ 1.54
SEC61A2-201ENST00000298428 KIF1AQ12756 1690 aa24.68■■□□□ 1.54
SEC61A2-201ENST00000298428 FBLN1P23142 703 aa24.68■■□□□ 1.54
SEC61A2-201ENST00000298428 POLKQ9UBT6 870 aa24.68■■□□□ 1.54
SEC61A2-201ENST00000298428 PSME1Q06323 249 aa24.68■■□□□ 1.54
SEC61A2-201ENST00000298428 USP31Q70CQ4 1352 aa24.67■■□□□ 1.54
SEC61A2-201ENST00000298428 MAP2P11137 1827 aaKnown RBP24.67■■□□□ 1.54
SEC61A2-201ENST00000298428 COL3A1P02461 1466 aaPredicted RBP24.66■■□□□ 1.54
SEC61A2-201ENST00000298428 PAK3O75914 559 aaPredicted RBP24.66■■□□□ 1.54
SEC61A2-201ENST00000298428 SMG6Q86US8 1419 aaKnown RBP24.66■■□□□ 1.54
SEC61A2-201ENST00000298428 PNPLA6Q8IY17 1366 aa24.65■■□□□ 1.54
SEC61A2-201ENST00000298428 SENP3-EIF4A1A0A087X0R7 540 aa24.65■■□□□ 1.54
SEC61A2-201ENST00000298428 FOXO3O43524 673 aa24.64■■□□□ 1.54
SEC61A2-201ENST00000298428 PPM1GO15355 546 aaPredicted RBP24.64■■□□□ 1.53
SEC61A2-201ENST00000298428 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.53
SEC61A2-201ENST00000298428 ABTB2Q8N961 1025 aa24.63■■□□□ 1.53
SEC61A2-201ENST00000298428 NLRP6P59044 892 aa24.62■■□□□ 1.53
SEC61A2-201ENST00000298428 USP54Q70EL1 1684 aa24.62■■□□□ 1.53
SEC61A2-201ENST00000298428 CDK12Q9NYV4 1490 aaPredicted RBP24.62■■□□□ 1.53
SEC61A2-201ENST00000298428 RRS1Q15050 365 aaKnown RBP24.62■■□□□ 1.53
SEC61A2-201ENST00000298428 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
SEC61A2-201ENST00000298428 DIAPH1O60610 1272 aaKnown RBP24.6■■□□□ 1.53
SEC61A2-201ENST00000298428 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
SEC61A2-201ENST00000298428 CCDC146Q8IYE0 955 aa24.59■■□□□ 1.53
SEC61A2-201ENST00000298428 MARF1Q9Y4F3 1742 aaKnown RBP24.59■■□□□ 1.53
SEC61A2-201ENST00000298428 XPCQ01831 940 aaPredicted RBP24.58■■□□□ 1.53
SEC61A2-201ENST00000298428 SOX12O15370 315 aa24.58■■□□□ 1.52
SEC61A2-201ENST00000298428 U2AF1L5P0DN76 240 aaPredicted RBP24.57■■□□□ 1.52
SEC61A2-201ENST00000298428 U2AF1Q01081 240 aaKnown RBP eCLIP24.57■■□□□ 1.52
SEC61A2-201ENST00000298428 KRT28Q7Z3Y7 464 aa24.57■■□□□ 1.52
SEC61A2-201ENST00000298428 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
SEC61A2-201ENST00000298428 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
SEC61A2-201ENST00000298428 TRPM3Q9HCF6 1732 aaPredicted RBP24.56■■□□□ 1.52
SEC61A2-201ENST00000298428 NPHP3Q7Z494 1330 aa24.52■■□□□ 1.52
SEC61A2-201ENST00000298428 SLAIN2Q9P270 581 aa24.52■■□□□ 1.52
SEC61A2-201ENST00000298428 RUNDC1Q96C34 613 aa24.51■■□□□ 1.51
SEC61A2-201ENST00000298428 PEAK1Q9H792 1746 aa24.51■■□□□ 1.51
SEC61A2-201ENST00000298428 MAP3K19Q56UN5 1328 aa24.51■■□□□ 1.51
SEC61A2-201ENST00000298428 APAF1O14727 1248 aa24.51■■□□□ 1.51
SEC61A2-201ENST00000298428 BRINP3Q76B58 766 aa24.51■■□□□ 1.51
SEC61A2-201ENST00000298428 DDX17Q92841 729 aaKnown RBP24.5■■□□□ 1.51
SEC61A2-201ENST00000298428 IL13P35225 146 aa24.49■■□□□ 1.51
SEC61A2-201ENST00000298428 SBNO1A3KN83 1393 aa24.49■■□□□ 1.51
SEC61A2-201ENST00000298428 LMOD2Q6P5Q4 547 aa24.49■■□□□ 1.51
SEC61A2-201ENST00000298428 LTBP4Q8N2S1 1624 aa24.48■■□□□ 1.51
SEC61A2-201ENST00000298428 FLT4P35916 1363 aa24.48■■□□□ 1.51
SEC61A2-201ENST00000298428 ALS2Q96Q42 1657 aa24.47■■□□□ 1.51
SEC61A2-201ENST00000298428 IQSEC2Q5JU85 1478 aa24.46■■□□□ 1.51
SEC61A2-201ENST00000298428 AMPHP49418 695 aa24.46■■□□□ 1.51
SEC61A2-201ENST00000298428 PDE3BQ13370 1112 aa24.46■■□□□ 1.51
SEC61A2-201ENST00000298428 KCNH5Q8NCM2 988 aa24.46■■□□□ 1.51
SEC61A2-201ENST00000298428 PXDNQ92626 1479 aa24.46■■□□□ 1.51
SEC61A2-201ENST00000298428 HSP90AB2PQ58FF8 381 aa24.45■■□□□ 1.51
SEC61A2-201ENST00000298428 NGEFQ8N5V2 710 aa24.45■■□□□ 1.51
SEC61A2-201ENST00000298428 KIF24Q5T7B8 1368 aa24.45■■□□□ 1.51
SEC61A2-201ENST00000298428 NFAT5O94916 1531 aa24.45■■□□□ 1.5
SEC61A2-201ENST00000298428 SLIT3O75094 1523 aa24.44■■□□□ 1.5
SEC61A2-201ENST00000298428 EIF4A2Q14240 407 aaKnown RBP24.44■■□□□ 1.5
SEC61A2-201ENST00000298428 PNNQ9H307 717 aaKnown RBP24.44■■□□□ 1.5
SEC61A2-201ENST00000298428 USP19O94966 1318 aa24.43■■□□□ 1.5
SEC61A2-201ENST00000298428 TCP11L2Q8N4U5 519 aa24.43■■□□□ 1.5
SEC61A2-201ENST00000298428 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
SEC61A2-201ENST00000298428 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
SEC61A2-201ENST00000298428 FCHSD2O94868 740 aa24.43■■□□□ 1.5
SEC61A2-201ENST00000298428 ZNF521Q96K83 1311 aa24.42■■□□□ 1.5
SEC61A2-201ENST00000298428 RTL1A6NKG5 1358 aa24.41■■□□□ 1.5
SEC61A2-201ENST00000298428 LTN1O94822 1766 aa24.41■■□□□ 1.5
SEC61A2-201ENST00000298428 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
SEC61A2-201ENST00000298428 RSPH6AQ9H0K4 717 aa24.41■■□□□ 1.5
SEC61A2-201ENST00000298428 GTF3C3Q9Y5Q9 886 aa24.41■■□□□ 1.5
SEC61A2-201ENST00000298428 GCP02774 474 aa24.4■■□□□ 1.5
SEC61A2-201ENST00000298428 HOXC9P31274 260 aa24.4■■□□□ 1.5
SEC61A2-201ENST00000298428 HMOX1P09601 288 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms