RNA–Protein interactions for RNA: ENST00000291295.13

CALM3-201, Transcript of calmodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALM3, Length 2,289 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-201ENST00000291295 HDGFL2Q7Z4V5 671 aaPredicted RBP23.71■■□□□ 1.39
CALM3-201ENST00000291295 SLC4A3P48751 1232 aa23.7■■□□□ 1.38
CALM3-201ENST00000291295 NUDT16Q96DE0 195 aaKnown RBP23.7■■□□□ 1.38
CALM3-201ENST00000291295 PPIP5K1Q6PFW1 1433 aa23.69■■□□□ 1.38
CALM3-201ENST00000291295 PDE3BQ13370 1112 aa23.68■■□□□ 1.38
CALM3-201ENST00000291295 EIF5BO60841 1220 aaKnown RBP23.68■■□□□ 1.38
CALM3-201ENST00000291295 GGNBP2Q9H3C7 697 aa23.68■■□□□ 1.38
CALM3-201ENST00000291295 PTCH1Q13635 1447 aa23.68■■□□□ 1.38
CALM3-201ENST00000291295 KCNA6P17658 529 aa23.67■■□□□ 1.38
CALM3-201ENST00000291295 ADAMTS8Q9UP79 889 aa23.67■■□□□ 1.38
CALM3-201ENST00000291295 NSD2O96028 1365 aa23.67■■□□□ 1.38
CALM3-201ENST00000291295 PRR36Q9H6K5 1346 aa23.67■■□□□ 1.38
CALM3-201ENST00000291295 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
CALM3-201ENST00000291295 ATP7BP35670 1465 aa23.67■■□□□ 1.38
CALM3-201ENST00000291295 ADGRB2O60241 1585 aa23.66■■□□□ 1.38
CALM3-201ENST00000291295 PLIN1O60240 522 aa23.66■■□□□ 1.38
CALM3-201ENST00000291295 XRN1Q8IZH2 1706 aaKnown RBP23.66■■□□□ 1.38
CALM3-201ENST00000291295 CDCA7LQ96GN5 454 aa23.66■■□□□ 1.38
CALM3-201ENST00000291295 CCDC61Q9Y6R9 512 aa23.66■■□□□ 1.38
CALM3-201ENST00000291295 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
CALM3-201ENST00000291295 FYB1O15117 783 aa23.64■■□□□ 1.38
CALM3-201ENST00000291295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.63■■□□□ 1.37
CALM3-201ENST00000291295 CRBNQ96SW2 442 aa23.63■■□□□ 1.37
CALM3-201ENST00000291295 PIK3R4Q99570 1358 aa23.63■■□□□ 1.37
CALM3-201ENST00000291295 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
CALM3-201ENST00000291295 CPSF1Q10570 1443 aaKnown RBP23.61■■□□□ 1.37
CALM3-201ENST00000291295 NPHP4O75161 1426 aaPredicted RBP23.6■■□□□ 1.37
CALM3-201ENST00000291295 MTHFSP49914 203 aa23.59■■□□□ 1.37
CALM3-201ENST00000291295 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
CALM3-201ENST00000291295 POLR3AO14802 1390 aaPredicted RBP23.59■■□□□ 1.37
CALM3-201ENST00000291295 INSRP06213 1382 aa23.58■■□□□ 1.37
CALM3-201ENST00000291295 KDM2BQ8NHM5 1336 aa23.57■■□□□ 1.36
CALM3-201ENST00000291295 CHD2O14647 1828 aaKnown RBP23.57■■□□□ 1.36
CALM3-201ENST00000291295 KIF20BQ96Q89 1820 aa23.57■■□□□ 1.36
CALM3-201ENST00000291295 DAXXQ9UER7 740 aaPredicted RBP23.57■■□□□ 1.36
CALM3-201ENST00000291295 ANKRD26Q9UPS8 1709 aa23.56■■□□□ 1.36
CALM3-201ENST00000291295 FRAT2O75474 233 aaPredicted RBP23.56■■□□□ 1.36
CALM3-201ENST00000291295 FAM43AQ8N2R8 423 aa23.56■■□□□ 1.36
CALM3-201ENST00000291295 RBM33Q96EV2 1170 aaKnown RBP23.56■■□□□ 1.36
CALM3-201ENST00000291295 EDC4Q6P2E9 1401 aaKnown RBP23.55■■□□□ 1.36
CALM3-201ENST00000291295 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
CALM3-201ENST00000291295 TOPAZ1Q8N9V7 1692 aa23.54■■□□□ 1.36
CALM3-201ENST00000291295 C8orf34Q49A92 452 aa23.53■■□□□ 1.36
CALM3-201ENST00000291295 CCDC146Q8IYE0 955 aa23.53■■□□□ 1.36
CALM3-201ENST00000291295 NKTRP30414 1462 aaKnown RBP23.53■■□□□ 1.36
CALM3-201ENST00000291295 ITSN1Q15811 1721 aa23.53■■□□□ 1.36
CALM3-201ENST00000291295 NME9Q86XW9 330 aa23.53■■□□□ 1.36
CALM3-201ENST00000291295 MON2Q7Z3U7 1717 aa23.52■■□□□ 1.36
CALM3-201ENST00000291295 C20orf194Q5TEA3 1177 aa23.52■■□□□ 1.36
CALM3-201ENST00000291295 ACEP12821 1306 aa23.52■■□□□ 1.36
CALM3-201ENST00000291295 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
CALM3-201ENST00000291295 SHPRHQ149N8 1683 aa23.51■■□□□ 1.35
CALM3-201ENST00000291295 ZRANB1Q9UGI0 708 aa23.5■■□□□ 1.35
CALM3-201ENST00000291295 PLEKHG3A1L390 1219 aa23.5■■□□□ 1.35
CALM3-201ENST00000291295 FAM161AQ3B820 660 aa23.5■■□□□ 1.35
CALM3-201ENST00000291295 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
CALM3-201ENST00000291295 ZNF692Q9BU19 519 aaPredicted RBP23.5■■□□□ 1.35
CALM3-201ENST00000291295 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
CALM3-201ENST00000291295 FBLN1P23142 703 aa23.49■■□□□ 1.35
CALM3-201ENST00000291295 PMFBP1Q8TBY8 1022 aa23.49■■□□□ 1.35
CALM3-201ENST00000291295 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
CALM3-201ENST00000291295 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
CALM3-201ENST00000291295 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
CALM3-201ENST00000291295 HSPA2P54652 639 aa23.46■■□□□ 1.35
CALM3-201ENST00000291295 USP6P35125 1406 aa23.44■■□□□ 1.34
CALM3-201ENST00000291295 APAF1O14727 1248 aa23.43■■□□□ 1.34
CALM3-201ENST00000291295 NRKQ7Z2Y5 1582 aa23.43■■□□□ 1.34
CALM3-201ENST00000291295 TTC21BQ7Z4L5 1316 aa23.43■■□□□ 1.34
CALM3-201ENST00000291295 FMN2Q9NZ56 1722 aa23.43■■□□□ 1.34
CALM3-201ENST00000291295 COG3Q96JB2 828 aa23.42■■□□□ 1.34
CALM3-201ENST00000291295 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
CALM3-201ENST00000291295 ANKARQ7Z5J8 1434 aa23.41■■□□□ 1.34
CALM3-201ENST00000291295 POLKQ9UBT6 870 aa23.41■■□□□ 1.34
CALM3-201ENST00000291295 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
CALM3-201ENST00000291295 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
CALM3-201ENST00000291295 ADGRL3Q9HAR2 1447 aa23.39■■□□□ 1.34
CALM3-201ENST00000291295 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.33
CALM3-201ENST00000291295 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.33
CALM3-201ENST00000291295 NWD1Q149M9 1564 aa23.38■■□□□ 1.33
CALM3-201ENST00000291295 EMILIN1Q9Y6C2 1016 aa23.38■■□□□ 1.33
CALM3-201ENST00000291295 MAP2P11137 1827 aaKnown RBP23.37■■□□□ 1.33
CALM3-201ENST00000291295 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
CALM3-201ENST00000291295 SSH2Q76I76 1423 aa23.37■■□□□ 1.33
CALM3-201ENST00000291295 PNPLA6Q8IY17 1366 aa23.36■■□□□ 1.33
CALM3-201ENST00000291295 ZNF521Q96K83 1311 aa23.35■■□□□ 1.33
CALM3-201ENST00000291295 RRS1Q15050 365 aaKnown RBP23.35■■□□□ 1.33
CALM3-201ENST00000291295 PROSER2Q86WR7 435 aaPredicted RBP23.35■■□□□ 1.33
CALM3-201ENST00000291295 RUNDC1Q96C34 613 aa23.34■■□□□ 1.33
CALM3-201ENST00000291295 DIAPH1O60610 1272 aaKnown RBP23.34■■□□□ 1.33
CALM3-201ENST00000291295 RRAGDQ9NQL2 400 aaPredicted RBP23.34■■□□□ 1.33
CALM3-201ENST00000291295 AATKQ6ZMQ8 1374 aa23.33■■□□□ 1.33
CALM3-201ENST00000291295 OVOS2A0A0J9YW53 1432 aa23.33■■□□□ 1.32
CALM3-201ENST00000291295 OVOS2Q6IE36 1432 aa23.33■■□□□ 1.32
CALM3-201ENST00000291295 LMTK3Q96Q04 1460 aa23.33■■□□□ 1.32
CALM3-201ENST00000291295 RGS3P49796 1198 aa23.33■■□□□ 1.32
CALM3-201ENST00000291295 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
CALM3-201ENST00000291295 NEUROD2Q15784 382 aa23.31■■□□□ 1.32
CALM3-201ENST00000291295 TCP11L2Q8N4U5 519 aa23.31■■□□□ 1.32
CALM3-201ENST00000291295 PHF8Q9UPP1 1060 aa23.31■■□□□ 1.32
CALM3-201ENST00000291295 TTC21AQ8NDW8 1320 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms