RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
PREX2-201ENST00000288368 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
PREX2-201ENST00000288368 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
PREX2-201ENST00000288368 ATP2B2Q01814 1243 aa13.24□□□□□ -0.29
PREX2-201ENST00000288368 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
PREX2-201ENST00000288368 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
PREX2-201ENST00000288368 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
PREX2-201ENST00000288368 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
PREX2-201ENST00000288368 SYCP1Q15431 976 aa13.23□□□□□ -0.29
PREX2-201ENST00000288368 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
PREX2-201ENST00000288368 CWC15Q9P013 229 aaKnown RBP13.23□□□□□ -0.29
PREX2-201ENST00000288368 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
PREX2-201ENST00000288368 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
PREX2-201ENST00000288368 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
PREX2-201ENST00000288368 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
PREX2-201ENST00000288368 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
PREX2-201ENST00000288368 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
PREX2-201ENST00000288368 CCP110O43303 1012 aa13.22□□□□□ -0.29
PREX2-201ENST00000288368 TSPY26PQ9H489 355 aa13.21□□□□□ -0.29
PREX2-201ENST00000288368 SCAPERQ9BY12 1400 aa13.21□□□□□ -0.29
PREX2-201ENST00000288368 H0YHG0 523 aa13.21□□□□□ -0.29
PREX2-201ENST00000288368 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
PREX2-201ENST00000288368 CCDC7Q96M83 1385 aa13.21□□□□□ -0.29
PREX2-201ENST00000288368 CEBPZQ03701 1054 aaKnown RBP13.21□□□□□ -0.3
PREX2-201ENST00000288368 ZNF396Q96N95 335 aaPredicted RBP13.21□□□□□ -0.3
PREX2-201ENST00000288368 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.3
PREX2-201ENST00000288368 HIP1O00291 1037 aa13.2□□□□□ -0.3
PREX2-201ENST00000288368 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
PREX2-201ENST00000288368 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
PREX2-201ENST00000288368 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
PREX2-201ENST00000288368 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
PREX2-201ENST00000288368 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
PREX2-201ENST00000288368 ATP2B1P20020 1258 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
PREX2-201ENST00000288368 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 SYNJ2O15056 1496 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
PREX2-201ENST00000288368 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
PREX2-201ENST00000288368 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
PREX2-201ENST00000288368 BRD4O60885 1362 aaPredicted RBP13.18□□□□□ -0.3
PREX2-201ENST00000288368 CUL7Q14999 1698 aa13.18□□□□□ -0.3
PREX2-201ENST00000288368 ZRSR2Q15696 482 aaKnown RBP13.18□□□□□ -0.3
PREX2-201ENST00000288368 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
PREX2-201ENST00000288368 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
PREX2-201ENST00000288368 PDCP20941 246 aa13.18□□□□□ -0.3
PREX2-201ENST00000288368 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
PREX2-201ENST00000288368 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
PREX2-201ENST00000288368 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
PREX2-201ENST00000288368 ERLIN2O94905 339 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 AAMPQ13685 434 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 SPC24Q8NBT2 197 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 STIM1Q13586 685 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
PREX2-201ENST00000288368 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
PREX2-201ENST00000288368 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
PREX2-201ENST00000288368 STK38Q15208 465 aa13.16□□□□□ -0.3
PREX2-201ENST00000288368 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
PREX2-201ENST00000288368 FIBPO43427 364 aa13.16□□□□□ -0.3
PREX2-201ENST00000288368 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
PREX2-201ENST00000288368 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
PREX2-201ENST00000288368 SIL1Q9H173 461 aa13.15□□□□□ -0.3
PREX2-201ENST00000288368 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
PREX2-201ENST00000288368 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
PREX2-201ENST00000288368 NLRP6P59044 892 aa13.15□□□□□ -0.3
PREX2-201ENST00000288368 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
PREX2-201ENST00000288368 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
PREX2-201ENST00000288368 CCDC69A6NI79 296 aa13.15□□□□□ -0.31
PREX2-201ENST00000288368 STK3Q13188 491 aa13.15□□□□□ -0.31
PREX2-201ENST00000288368 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
PREX2-201ENST00000288368 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
PREX2-201ENST00000288368 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
PREX2-201ENST00000288368 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
PREX2-201ENST00000288368 CFTRP13569 1480 aa13.14□□□□□ -0.31
PREX2-201ENST00000288368 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
PREX2-201ENST00000288368 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
PREX2-201ENST00000288368 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
PREX2-201ENST00000288368 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
PREX2-201ENST00000288368 SURF6O75683 361 aaKnown RBP13.14□□□□□ -0.31
PREX2-201ENST00000288368 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
PREX2-201ENST00000288368 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
PREX2-201ENST00000288368 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 GNAI2P04899 355 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 GNAI3P08754 354 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 CCDC158Q5M9N0 1113 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 DEF6Q9H4E7 631 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 RABEP1Q15276 862 aa13.13□□□□□ -0.31
PREX2-201ENST00000288368 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms