RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
MRPS28-201ENST00000276585 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
MRPS28-201ENST00000276585 CEP350Q5VT06 3117 aa18.32■□□□□ 0.52
MRPS28-201ENST00000276585 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
MRPS28-201ENST00000276585 NRKQ7Z2Y5 1582 aa18.31■□□□□ 0.52
MRPS28-201ENST00000276585 GIGYF1O75420 1035 aaPredicted RBP18.31■□□□□ 0.52
MRPS28-201ENST00000276585 MPHOSPH9Q99550 1183 aa18.31■□□□□ 0.52
MRPS28-201ENST00000276585 PDE3BQ13370 1112 aa18.3■□□□□ 0.52
MRPS28-201ENST00000276585 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
MRPS28-201ENST00000276585 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
MRPS28-201ENST00000276585 NRXN1Q9ULB1 1477 aa18.27■□□□□ 0.52
MRPS28-201ENST00000276585 TECPR2O15040 1411 aa18.27■□□□□ 0.52
MRPS28-201ENST00000276585 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
MRPS28-201ENST00000276585 PRDM11Q9NQV5 511 aa18.26■□□□□ 0.51
MRPS28-201ENST00000276585 CHD4Q14839 1912 aa18.25■□□□□ 0.51
MRPS28-201ENST00000276585 ADRA2BP18089 450 aa18.25■□□□□ 0.51
MRPS28-201ENST00000276585 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
MRPS28-201ENST00000276585 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
MRPS28-201ENST00000276585 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
MRPS28-201ENST00000276585 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
MRPS28-201ENST00000276585 MYOM1P52179 1685 aa18.23■□□□□ 0.51
MRPS28-201ENST00000276585 ABCC11Q96J66 1382 aa18.23■□□□□ 0.51
MRPS28-201ENST00000276585 SYT17Q9BSW7 474 aa18.23■□□□□ 0.51
MRPS28-201ENST00000276585 FHDC1Q9C0D6 1143 aaPredicted RBP18.23■□□□□ 0.51
MRPS28-201ENST00000276585 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
MRPS28-201ENST00000276585 ANO8Q9HCE9 1232 aaPredicted RBP18.22■□□□□ 0.51
MRPS28-201ENST00000276585 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
MRPS28-201ENST00000276585 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
MRPS28-201ENST00000276585 PTGER2P43116 358 aa18.2■□□□□ 0.5
MRPS28-201ENST00000276585 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
MRPS28-201ENST00000276585 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
MRPS28-201ENST00000276585 ADGRF5Q8IZF2 1346 aa18.19■□□□□ 0.5
MRPS28-201ENST00000276585 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
MRPS28-201ENST00000276585 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
MRPS28-201ENST00000276585 BCL11BQ9C0K0 894 aaPredicted RBP18.18■□□□□ 0.5
MRPS28-201ENST00000276585 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
MRPS28-201ENST00000276585 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
MRPS28-201ENST00000276585 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
MRPS28-201ENST00000276585 EVA1CP58658 441 aa18.16■□□□□ 0.5
MRPS28-201ENST00000276585 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
MRPS28-201ENST00000276585 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
MRPS28-201ENST00000276585 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
MRPS28-201ENST00000276585 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
MRPS28-201ENST00000276585 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
MRPS28-201ENST00000276585 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
MRPS28-201ENST00000276585 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.49
MRPS28-201ENST00000276585 GPR162Q16538 588 aa18.14■□□□□ 0.49
MRPS28-201ENST00000276585 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
MRPS28-201ENST00000276585 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
MRPS28-201ENST00000276585 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
MRPS28-201ENST00000276585 PLSCR1O15162 318 aa18.12■□□□□ 0.49
MRPS28-201ENST00000276585 TCP11L2Q8N4U5 519 aa18.12■□□□□ 0.49
MRPS28-201ENST00000276585 ZC3H6P61129 1189 aaKnown RBP18.11■□□□□ 0.49
MRPS28-201ENST00000276585 ANKARQ7Z5J8 1434 aa18.11■□□□□ 0.49
MRPS28-201ENST00000276585 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
MRPS28-201ENST00000276585 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
MRPS28-201ENST00000276585 MTFR1LQ9H019 292 aa18.1■□□□□ 0.49
MRPS28-201ENST00000276585 STK32BQ9NY57 414 aa18.1■□□□□ 0.49
MRPS28-201ENST00000276585 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
MRPS28-201ENST00000276585 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
MRPS28-201ENST00000276585 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
MRPS28-201ENST00000276585 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.48
MRPS28-201ENST00000276585 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.48
MRPS28-201ENST00000276585 PRAM1Q96QH2 718 aa18.08■□□□□ 0.48
MRPS28-201ENST00000276585 ARXQ96QS3 562 aa18.08■□□□□ 0.48
MRPS28-201ENST00000276585 OVOS2A0A0G2JMS6 1433 aa18.07■□□□□ 0.48
MRPS28-201ENST00000276585 OVOS2A0A0J9YW53 1432 aa18.07■□□□□ 0.48
MRPS28-201ENST00000276585 OVOS2Q6IE36 1432 aa18.07■□□□□ 0.48
MRPS28-201ENST00000276585 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
MRPS28-201ENST00000276585 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
MRPS28-201ENST00000276585 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
MRPS28-201ENST00000276585 POGKQ9P215 609 aa18.05■□□□□ 0.48
MRPS28-201ENST00000276585 THRAP3Q9Y2W1 955 aaKnown RBP18.05■□□□□ 0.48
MRPS28-201ENST00000276585 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
MRPS28-201ENST00000276585 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
MRPS28-201ENST00000276585 PROM2Q8N271 834 aa18.03■□□□□ 0.48
MRPS28-201ENST00000276585 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
MRPS28-201ENST00000276585 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
MRPS28-201ENST00000276585 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
MRPS28-201ENST00000276585 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
MRPS28-201ENST00000276585 PTF1AQ7RTS3 328 aa18.02■□□□□ 0.48
MRPS28-201ENST00000276585 HSPA6P17066 643 aa18.01■□□□□ 0.47
MRPS28-201ENST00000276585 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
MRPS28-201ENST00000276585 C14orf93Q9H972 538 aaKnown RBP18.01■□□□□ 0.47
MRPS28-201ENST00000276585 PHRF1Q9P1Y6 1649 aaKnown RBP18.01■□□□□ 0.47
MRPS28-201ENST00000276585 PARP4Q9UKK3 1724 aaKnown RBP18.01■□□□□ 0.47
MRPS28-201ENST00000276585 TXNRD1Q16881 649 aa18■□□□□ 0.47
MRPS28-201ENST00000276585 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
MRPS28-201ENST00000276585 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
MRPS28-201ENST00000276585 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
MRPS28-201ENST00000276585 GOLGB1Q14789 3259 aaKnown RBP17.98■□□□□ 0.47
MRPS28-201ENST00000276585 DDB1Q16531 1140 aa17.98■□□□□ 0.47
MRPS28-201ENST00000276585 CFAP70Q5T0N1 1121 aa17.98■□□□□ 0.47
MRPS28-201ENST00000276585 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
MRPS28-201ENST00000276585 ATP7BP35670 1465 aa17.96■□□□□ 0.47
MRPS28-201ENST00000276585 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
MRPS28-201ENST00000276585 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
MRPS28-201ENST00000276585 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
MRPS28-201ENST00000276585 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
MRPS28-201ENST00000276585 CAPN15O75808 1086 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms