RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 RAPGEF4Q8WZA2 1011 aa11.23□□□□□ -0.61
LBR-201ENST00000272163 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
LBR-201ENST00000272163 NEXMIFQ5QGS0 1516 aa11.23□□□□□ -0.61
LBR-201ENST00000272163 DDB1Q16531 1140 aa11.23□□□□□ -0.61
LBR-201ENST00000272163 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
LBR-201ENST00000272163 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
LBR-201ENST00000272163 SETBP1Q9Y6X0 1596 aa11.21□□□□□ -0.61
LBR-201ENST00000272163 CCDC125Q86Z20 511 aa11.21□□□□□ -0.61
LBR-201ENST00000272163 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.61
LBR-201ENST00000272163 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
LBR-201ENST00000272163 APBA3O96018 575 aa11.21□□□□□ -0.61
LBR-201ENST00000272163 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
LBR-201ENST00000272163 TNS3Q68CZ2 1445 aa11.21□□□□□ -0.62
LBR-201ENST00000272163 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.62
LBR-201ENST00000272163 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.62
LBR-201ENST00000272163 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.62
LBR-201ENST00000272163 ASXL1Q8IXJ9 1541 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 FAM83GA6ND36 823 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 VPS72Q15906 364 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 SBNO1A3KN83 1393 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
LBR-201ENST00000272163 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 MYOM2P54296 1465 aa11.2□□□□□ -0.62
LBR-201ENST00000272163 FNBP4Q8N3X1 1017 aaPredicted RBP11.19□□□□□ -0.62
LBR-201ENST00000272163 TTC21BQ7Z4L5 1316 aa11.19□□□□□ -0.62
LBR-201ENST00000272163 TTC21AQ8NDW8 1320 aa11.19□□□□□ -0.62
LBR-201ENST00000272163 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
LBR-201ENST00000272163 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
LBR-201ENST00000272163 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
LBR-201ENST00000272163 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
LBR-201ENST00000272163 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
LBR-201ENST00000272163 PHLPP1O60346 1717 aa11.18□□□□□ -0.62
LBR-201ENST00000272163 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
LBR-201ENST00000272163 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
LBR-201ENST00000272163 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
LBR-201ENST00000272163 RGS17Q9UGC6 210 aaPredicted RBP11.17□□□□□ -0.62
LBR-201ENST00000272163 TRIM37O94972 964 aa11.17□□□□□ -0.62
LBR-201ENST00000272163 NME9Q86XW9 330 aa11.17□□□□□ -0.62
LBR-201ENST00000272163 PRAG1Q86YV5 1406 aa11.16□□□□□ -0.62
LBR-201ENST00000272163 MYO5BQ9ULV0 1848 aa11.16□□□□□ -0.62
LBR-201ENST00000272163 USP47Q96K76 1375 aa11.16□□□□□ -0.62
LBR-201ENST00000272163 TATP17735 454 aaPredicted RBP11.16□□□□□ -0.62
LBR-201ENST00000272163 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
LBR-201ENST00000272163 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.62
LBR-201ENST00000272163 KAT6BQ8WYB5 2073 aa11.15□□□□□ -0.62
LBR-201ENST00000272163 TECPR2O15040 1411 aa11.15□□□□□ -0.62
LBR-201ENST00000272163 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
LBR-201ENST00000272163 DEFB132Q7Z7B7 95 aa11.14□□□□□ -0.63
LBR-201ENST00000272163 NWD1Q149M9 1564 aa11.14□□□□□ -0.63
LBR-201ENST00000272163 ARXQ96QS3 562 aa11.13□□□□□ -0.63
LBR-201ENST00000272163 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.13□□□□□ -0.63
LBR-201ENST00000272163 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
LBR-201ENST00000272163 ANKRD24Q8TF21 1146 aa11.13□□□□□ -0.63
LBR-201ENST00000272163 SMG6Q86US8 1419 aaKnown RBP11.13□□□□□ -0.63
LBR-201ENST00000272163 STK32BQ9NY57 414 aa11.12□□□□□ -0.63
LBR-201ENST00000272163 CHD2O14647 1828 aaKnown RBP11.12□□□□□ -0.63
LBR-201ENST00000272163 HSPA5P11021 654 aaKnown RBP11.12□□□□□ -0.63
LBR-201ENST00000272163 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
LBR-201ENST00000272163 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
LBR-201ENST00000272163 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
LBR-201ENST00000272163 ACSBG1Q96GR2 724 aa11.11□□□□□ -0.63
LBR-201ENST00000272163 IL2RBP14784 551 aa11.11□□□□□ -0.63
LBR-201ENST00000272163 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
LBR-201ENST00000272163 NPHP1O15259 732 aa11.1□□□□□ -0.63
LBR-201ENST00000272163 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
LBR-201ENST00000272163 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
LBR-201ENST00000272163 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
LBR-201ENST00000272163 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
LBR-201ENST00000272163 C1orf141Q5JVX7 400 aa11.08□□□□□ -0.64
LBR-201ENST00000272163 CC2D1BQ5T0F9 858 aaKnown RBP11.08□□□□□ -0.64
LBR-201ENST00000272163 CDC42BPGQ6DT37 1551 aa11.08□□□□□ -0.64
LBR-201ENST00000272163 TULP4Q9NRJ4 1543 aa11.07□□□□□ -0.64
LBR-201ENST00000272163 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
LBR-201ENST00000272163 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
LBR-201ENST00000272163 R3HDM1Q15032 1099 aaKnown RBP11.07□□□□□ -0.64
LBR-201ENST00000272163 PANK3Q9H999 370 aa11.07□□□□□ -0.64
LBR-201ENST00000272163 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
LBR-201ENST00000272163 PUS7Q96PZ0 661 aaKnown RBP11.06□□□□□ -0.64
LBR-201ENST00000272163 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
LBR-201ENST00000272163 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
LBR-201ENST00000272163 NINLQ9Y2I6 1382 aa11.06□□□□□ -0.64
LBR-201ENST00000272163 DLC1Q96QB1 1528 aa11.06□□□□□ -0.64
LBR-201ENST00000272163 NRXN1Q9ULB1 1477 aa11.06□□□□□ -0.64
LBR-201ENST00000272163 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
LBR-201ENST00000272163 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
LBR-201ENST00000272163 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
LBR-201ENST00000272163 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
LBR-201ENST00000272163 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
LBR-201ENST00000272163 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
LBR-201ENST00000272163 POLD1P28340 1107 aa11.05□□□□□ -0.64
LBR-201ENST00000272163 LAMC1P11047 1609 aa11.04□□□□□ -0.64
LBR-201ENST00000272163 LRP6O75581 1613 aa11.04□□□□□ -0.64
LBR-201ENST00000272163 IP6K1Q92551 441 aa11.04□□□□□ -0.64
LBR-201ENST00000272163 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
LBR-201ENST00000272163 USHBP1Q8N6Y0 703 aa11.04□□□□□ -0.64
LBR-201ENST00000272163 USP6P35125 1406 aa11.03□□□□□ -0.64
LBR-201ENST00000272163 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
LBR-201ENST00000272163 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms