RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 ARHGEF5Q12774 1597 aa10.27□□□□□ -0.77
ZIM3-201ENST00000269834 ANKRD30AQ9BXX3 1397 aa10.26□□□□□ -0.77
ZIM3-201ENST00000269834 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
ZIM3-201ENST00000269834 GIPC2Q8TF65 315 aa10.26□□□□□ -0.77
ZIM3-201ENST00000269834 BCCIPQ9P287 314 aaKnown RBP eCLIP10.26□□□□□ -0.77
ZIM3-201ENST00000269834 RFC5P40937 340 aa10.25□□□□□ -0.77
ZIM3-201ENST00000269834 HDGFL1Q5TGJ6 251 aa10.25□□□□□ -0.77
ZIM3-201ENST00000269834 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
ZIM3-201ENST00000269834 LRPPRCP42704 1394 aaKnown RBP10.25□□□□□ -0.77
ZIM3-201ENST00000269834 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
ZIM3-201ENST00000269834 PSEN1P49768 467 aa10.24□□□□□ -0.77
ZIM3-201ENST00000269834 PDIA6Q15084 440 aa10.24□□□□□ -0.77
ZIM3-201ENST00000269834 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
ZIM3-201ENST00000269834 PTPRGP23470 1445 aa10.24□□□□□ -0.77
ZIM3-201ENST00000269834 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
ZIM3-201ENST00000269834 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
ZIM3-201ENST00000269834 KIF15Q9NS87 1388 aa10.24□□□□□ -0.77
ZIM3-201ENST00000269834 ABCA8O94911 1581 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 ANKRD50Q9ULJ7 1429 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 TAGLNQ01995 201 aaKnown RBP10.23□□□□□ -0.77
ZIM3-201ENST00000269834 B4GALNT3Q6L9W6 998 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 TRPM1Q7Z4N2 1603 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
ZIM3-201ENST00000269834 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
ZIM3-201ENST00000269834 NLRP6P59044 892 aa10.22□□□□□ -0.77
ZIM3-201ENST00000269834 MS4A4AQ96JQ5 239 aa10.22□□□□□ -0.77
ZIM3-201ENST00000269834 BRD4O60885 1362 aaPredicted RBP10.22□□□□□ -0.77
ZIM3-201ENST00000269834 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
ZIM3-201ENST00000269834 INSRP06213 1382 aa10.21□□□□□ -0.77
ZIM3-201ENST00000269834 SHROOM2Q13796 1616 aa10.21□□□□□ -0.78
ZIM3-201ENST00000269834 CFDP1Q9UEE9 299 aaPredicted RBP10.2□□□□□ -0.78
ZIM3-201ENST00000269834 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
ZIM3-201ENST00000269834 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
ZIM3-201ENST00000269834 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
ZIM3-201ENST00000269834 LOC102724159A0A0B4J2E5 919 aa10.2□□□□□ -0.78
ZIM3-201ENST00000269834 CANXP27824 592 aaKnown RBP10.2□□□□□ -0.78
ZIM3-201ENST00000269834 PWP2Q15269 919 aaKnown RBP10.2□□□□□ -0.78
ZIM3-201ENST00000269834 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
ZIM3-201ENST00000269834 UNC13BO14795 1591 aa10.2□□□□□ -0.78
ZIM3-201ENST00000269834 ZC3H4Q9UPT8 1303 aaKnown RBP10.2□□□□□ -0.78
ZIM3-201ENST00000269834 CARMIL2Q6F5E8 1435 aa10.2□□□□□ -0.78
ZIM3-201ENST00000269834 PNISRQ8TF01 805 aaKnown RBP10.2□□□□□ -0.78
ZIM3-201ENST00000269834 PREX2Q70Z35 1606 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 MAST1Q9Y2H9 1570 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 EIF2AK4Q9P2K8 1649 aaKnown RBP10.19□□□□□ -0.78
ZIM3-201ENST00000269834 MICAL1Q8TDZ2 1067 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 RAB11FIP3O75154 756 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 CLSTN1O94985 981 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 NAALADL2Q58DX5 795 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
ZIM3-201ENST00000269834 RALBP1Q15311 655 aa10.18□□□□□ -0.78
ZIM3-201ENST00000269834 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
ZIM3-201ENST00000269834 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
ZIM3-201ENST00000269834 HIC1Q14526 733 aa10.18□□□□□ -0.78
ZIM3-201ENST00000269834 MYBBP1AQ9BQG0 1328 aaKnown RBP10.18□□□□□ -0.78
ZIM3-201ENST00000269834 MYO5CQ9NQX4 1742 aa10.17□□□□□ -0.78
ZIM3-201ENST00000269834 NCLP19338 710 aaKnown RBP10.17□□□□□ -0.78
ZIM3-201ENST00000269834 FARP1Q9Y4F1 1045 aaPredicted RBP10.17□□□□□ -0.78
ZIM3-201ENST00000269834 JPH4Q96JJ6 628 aa10.17□□□□□ -0.78
ZIM3-201ENST00000269834 PPP1R12CQ9BZL4 782 aa10.17□□□□□ -0.78
ZIM3-201ENST00000269834 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
ZIM3-201ENST00000269834 SLC52A1Q9NWF4 448 aa10.17□□□□□ -0.78
ZIM3-201ENST00000269834 UBXN4Q92575 508 aa10.16□□□□□ -0.78
ZIM3-201ENST00000269834 RIPOR2Q9Y4F9 1068 aa10.16□□□□□ -0.78
ZIM3-201ENST00000269834 PRDM15P57071 1507 aaPredicted RBP10.16□□□□□ -0.78
ZIM3-201ENST00000269834 FAM135AQ9P2D6 1515 aa10.16□□□□□ -0.78
ZIM3-201ENST00000269834 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
ZIM3-201ENST00000269834 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
ZIM3-201ENST00000269834 RNF17Q9BXT8 1623 aaKnown RBP10.16□□□□□ -0.78
ZIM3-201ENST00000269834 CDC42BPBQ9Y5S2 1711 aa10.16□□□□□ -0.78
ZIM3-201ENST00000269834 PLXNC1O60486 1568 aa10.15□□□□□ -0.78
ZIM3-201ENST00000269834 PARD3Q8TEW0 1356 aa10.15□□□□□ -0.78
ZIM3-201ENST00000269834 ANP32AP39687 249 aaKnown RBP10.15□□□□□ -0.78
ZIM3-201ENST00000269834 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
ZIM3-201ENST00000269834 PPME1Q9Y570 386 aa10.15□□□□□ -0.78
ZIM3-201ENST00000269834 IQGAP3Q86VI3 1631 aa10.15□□□□□ -0.78
ZIM3-201ENST00000269834 SAMD9LQ8IVG5 1584 aa10.15□□□□□ -0.78
ZIM3-201ENST00000269834 PALM3A6NDB9 673 aaPredicted RBP10.15□□□□□ -0.79
ZIM3-201ENST00000269834 DPH6Q7L8W6 267 aa10.15□□□□□ -0.79
ZIM3-201ENST00000269834 GNEQ9Y223 722 aaKnown RBP10.15□□□□□ -0.79
ZIM3-201ENST00000269834 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 NUP155O75694 1391 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 GPRASP1Q5JY77 1395 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 TMC1Q8TDI8 760 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 VTI1AQ96AJ9 217 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 DNAJC2Q99543 621 aaKnown RBP10.14□□□□□ -0.79
ZIM3-201ENST00000269834 COL17A1Q9UMD9 1497 aaPredicted RBP10.14□□□□□ -0.79
ZIM3-201ENST00000269834 OSBPP22059 807 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 ZC3H6P61129 1189 aaKnown RBP10.14□□□□□ -0.79
ZIM3-201ENST00000269834 GPATCH3Q96I76 525 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 IPO9Q96P70 1041 aaKnown RBP10.14□□□□□ -0.79
ZIM3-201ENST00000269834 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
ZIM3-201ENST00000269834 PRAG1Q86YV5 1406 aa10.13□□□□□ -0.79
ZIM3-201ENST00000269834 SCNN1AP37088 669 aa10.13□□□□□ -0.79
ZIM3-201ENST00000269834 CARD11Q9BXL7 1154 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms