RNA–Protein interactions for RNA: ENST00000263671.9

CHRDL2-201, Transcript of chordin like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRDL2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-201ENST00000263671 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
CHRDL2-201ENST00000263671 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
CHRDL2-201ENST00000263671 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
CHRDL2-201ENST00000263671 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
CHRDL2-201ENST00000263671 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
CHRDL2-201ENST00000263671 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
CHRDL2-201ENST00000263671 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.37
CHRDL2-201ENST00000263671 KIF1AQ12756 1690 aa17.33■□□□□ 0.36
CHRDL2-201ENST00000263671 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.36
CHRDL2-201ENST00000263671 MST1RQ04912 1400 aa17.33■□□□□ 0.36
CHRDL2-201ENST00000263671 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
CHRDL2-201ENST00000263671 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
CHRDL2-201ENST00000263671 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
CHRDL2-201ENST00000263671 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
CHRDL2-201ENST00000263671 MSH6P52701 1360 aa17.31■□□□□ 0.36
CHRDL2-201ENST00000263671 MTHFSP49914 203 aa17.31■□□□□ 0.36
CHRDL2-201ENST00000263671 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
CHRDL2-201ENST00000263671 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
CHRDL2-201ENST00000263671 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
CHRDL2-201ENST00000263671 MAP2P11137 1827 aaKnown RBP17.3■□□□□ 0.36
CHRDL2-201ENST00000263671 ATF3P18847 181 aa17.3■□□□□ 0.36
CHRDL2-201ENST00000263671 USP54Q70EL1 1684 aa17.29■□□□□ 0.36
CHRDL2-201ENST00000263671 COG3Q96JB2 828 aa17.29■□□□□ 0.36
CHRDL2-201ENST00000263671 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
CHRDL2-201ENST00000263671 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
CHRDL2-201ENST00000263671 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
CHRDL2-201ENST00000263671 FBLN1P23142 703 aa17.27■□□□□ 0.35
CHRDL2-201ENST00000263671 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.35
CHRDL2-201ENST00000263671 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.35
CHRDL2-201ENST00000263671 TRPM3Q9HCF6 1732 aaPredicted RBP17.26■□□□□ 0.35
CHRDL2-201ENST00000263671 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
CHRDL2-201ENST00000263671 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
CHRDL2-201ENST00000263671 INSRP06213 1382 aa17.26■□□□□ 0.35
CHRDL2-201ENST00000263671 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
CHRDL2-201ENST00000263671 USP31Q70CQ4 1352 aa17.25■□□□□ 0.35
CHRDL2-201ENST00000263671 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
CHRDL2-201ENST00000263671 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
CHRDL2-201ENST00000263671 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
CHRDL2-201ENST00000263671 FOXO3O43524 673 aa17.23■□□□□ 0.35
CHRDL2-201ENST00000263671 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
CHRDL2-201ENST00000263671 PSME1Q06323 249 aa17.23■□□□□ 0.35
CHRDL2-201ENST00000263671 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
CHRDL2-201ENST00000263671 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
CHRDL2-201ENST00000263671 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
CHRDL2-201ENST00000263671 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
CHRDL2-201ENST00000263671 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
CHRDL2-201ENST00000263671 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
CHRDL2-201ENST00000263671 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
CHRDL2-201ENST00000263671 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
CHRDL2-201ENST00000263671 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
CHRDL2-201ENST00000263671 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
CHRDL2-201ENST00000263671 ABTB2Q8N961 1025 aa17.2■□□□□ 0.34
CHRDL2-201ENST00000263671 ALS2Q96Q42 1657 aa17.19■□□□□ 0.34
CHRDL2-201ENST00000263671 NLRP6P59044 892 aa17.19■□□□□ 0.34
CHRDL2-201ENST00000263671 SOX12O15370 315 aa17.18■□□□□ 0.34
CHRDL2-201ENST00000263671 KRT28Q7Z3Y7 464 aa17.18■□□□□ 0.34
CHRDL2-201ENST00000263671 DDX17Q92841 729 aaKnown RBP17.17■□□□□ 0.34
CHRDL2-201ENST00000263671 CCDC146Q8IYE0 955 aa17.16■□□□□ 0.34
CHRDL2-201ENST00000263671 PXDNQ92626 1479 aa17.16■□□□□ 0.34
CHRDL2-201ENST00000263671 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
CHRDL2-201ENST00000263671 NFAT5O94916 1531 aa17.15■□□□□ 0.34
CHRDL2-201ENST00000263671 LTN1O94822 1766 aa17.15■□□□□ 0.34
CHRDL2-201ENST00000263671 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
CHRDL2-201ENST00000263671 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
CHRDL2-201ENST00000263671 SLIT3O75094 1523 aa17.14■□□□□ 0.33
CHRDL2-201ENST00000263671 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
CHRDL2-201ENST00000263671 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
CHRDL2-201ENST00000263671 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
CHRDL2-201ENST00000263671 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHRDL2-201ENST00000263671 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
CHRDL2-201ENST00000263671 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
CHRDL2-201ENST00000263671 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
CHRDL2-201ENST00000263671 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
CHRDL2-201ENST00000263671 NHSL1Q5SYE7 1610 aa17.12■□□□□ 0.33
CHRDL2-201ENST00000263671 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
CHRDL2-201ENST00000263671 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
CHRDL2-201ENST00000263671 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
CHRDL2-201ENST00000263671 IL13P35225 146 aa17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 FLT4P35916 1363 aa17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 USP19O94966 1318 aa17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 APAF1O14727 1248 aa17.1■□□□□ 0.33
CHRDL2-201ENST00000263671 CRYBG1Q9Y4K1 1723 aa17.09■□□□□ 0.33
CHRDL2-201ENST00000263671 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
CHRDL2-201ENST00000263671 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
CHRDL2-201ENST00000263671 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.32
CHRDL2-201ENST00000263671 ROBO1Q9Y6N7 1651 aa17.08■□□□□ 0.32
CHRDL2-201ENST00000263671 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
CHRDL2-201ENST00000263671 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
CHRDL2-201ENST00000263671 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
CHRDL2-201ENST00000263671 AMPHP49418 695 aa17.07■□□□□ 0.32
CHRDL2-201ENST00000263671 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
CHRDL2-201ENST00000263671 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
CHRDL2-201ENST00000263671 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
CHRDL2-201ENST00000263671 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
CHRDL2-201ENST00000263671 GCP02774 474 aa17.05■□□□□ 0.32
CHRDL2-201ENST00000263671 HOXC9P31274 260 aa17.05■□□□□ 0.32
CHRDL2-201ENST00000263671 SOS2Q07890 1332 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms