RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
LCN1-201ENST00000263598 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
LCN1-201ENST00000263598 SPATA31A5Q5VU36 1347 aa13.15□□□□□ -0.3
LCN1-201ENST00000263598 SPATA31A7Q8IWB4 1347 aa13.15□□□□□ -0.3
LCN1-201ENST00000263598 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
LCN1-201ENST00000263598 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
LCN1-201ENST00000263598 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
LCN1-201ENST00000263598 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
LCN1-201ENST00000263598 LRP5O75197 1615 aa13.14□□□□□ -0.31
LCN1-201ENST00000263598 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
LCN1-201ENST00000263598 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
LCN1-201ENST00000263598 HRCP23327 699 aa13.13□□□□□ -0.31
LCN1-201ENST00000263598 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
LCN1-201ENST00000263598 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
LCN1-201ENST00000263598 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
LCN1-201ENST00000263598 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
LCN1-201ENST00000263598 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
LCN1-201ENST00000263598 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
LCN1-201ENST00000263598 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
LCN1-201ENST00000263598 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
LCN1-201ENST00000263598 FAM196AQ6ZSG2 479 aa13.09□□□□□ -0.31
LCN1-201ENST00000263598 STRN4Q9NRL3 753 aa13.09□□□□□ -0.31
LCN1-201ENST00000263598 ATP7BP35670 1465 aa13.09□□□□□ -0.31
LCN1-201ENST00000263598 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.31
LCN1-201ENST00000263598 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
LCN1-201ENST00000263598 EVA1CP58658 441 aa13.08□□□□□ -0.32
LCN1-201ENST00000263598 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
LCN1-201ENST00000263598 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
LCN1-201ENST00000263598 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
LCN1-201ENST00000263598 TRIM37O94972 964 aa13.07□□□□□ -0.32
LCN1-201ENST00000263598 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
LCN1-201ENST00000263598 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
LCN1-201ENST00000263598 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
LCN1-201ENST00000263598 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
LCN1-201ENST00000263598 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
LCN1-201ENST00000263598 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
LCN1-201ENST00000263598 APBA3O96018 575 aa13.05□□□□□ -0.32
LCN1-201ENST00000263598 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
LCN1-201ENST00000263598 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
LCN1-201ENST00000263598 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
LCN1-201ENST00000263598 CAMKK2Q96RR4 588 aa13.05□□□□□ -0.32
LCN1-201ENST00000263598 ACEP12821 1306 aa13.05□□□□□ -0.32
LCN1-201ENST00000263598 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
LCN1-201ENST00000263598 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
LCN1-201ENST00000263598 PHRF1Q9P1Y6 1649 aaKnown RBP13.04□□□□□ -0.32
LCN1-201ENST00000263598 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
LCN1-201ENST00000263598 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
LCN1-201ENST00000263598 TNS1Q9HBL0 1735 aaKnown RBP13.04□□□□□ -0.32
LCN1-201ENST00000263598 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
LCN1-201ENST00000263598 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
LCN1-201ENST00000263598 TCP11L2Q8N4U5 519 aa13.02□□□□□ -0.33
LCN1-201ENST00000263598 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
LCN1-201ENST00000263598 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
LCN1-201ENST00000263598 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
LCN1-201ENST00000263598 CPDO75976 1380 aa13.01□□□□□ -0.33
LCN1-201ENST00000263598 USP19O94966 1318 aa13□□□□□ -0.33
LCN1-201ENST00000263598 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
LCN1-201ENST00000263598 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
LCN1-201ENST00000263598 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
LCN1-201ENST00000263598 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
LCN1-201ENST00000263598 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
LCN1-201ENST00000263598 GCP02774 474 aa12.99□□□□□ -0.33
LCN1-201ENST00000263598 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
LCN1-201ENST00000263598 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
LCN1-201ENST00000263598 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
LCN1-201ENST00000263598 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
LCN1-201ENST00000263598 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.33
LCN1-201ENST00000263598 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
LCN1-201ENST00000263598 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
LCN1-201ENST00000263598 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
LCN1-201ENST00000263598 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
LCN1-201ENST00000263598 PPP1R1BQ9UD71 204 aaPredicted RBP12.95□□□□□ -0.34
LCN1-201ENST00000263598 RREB1Q92766 1687 aa12.95□□□□□ -0.34
LCN1-201ENST00000263598 CRB1P82279 1406 aa12.95□□□□□ -0.34
LCN1-201ENST00000263598 NLRP6P59044 892 aa12.94□□□□□ -0.34
LCN1-201ENST00000263598 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
LCN1-201ENST00000263598 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
LCN1-201ENST00000263598 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
LCN1-201ENST00000263598 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
LCN1-201ENST00000263598 AATKQ6ZMQ8 1374 aa12.94□□□□□ -0.34
LCN1-201ENST00000263598 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
LCN1-201ENST00000263598 DDB1Q16531 1140 aa12.93□□□□□ -0.34
LCN1-201ENST00000263598 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
LCN1-201ENST00000263598 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
LCN1-201ENST00000263598 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
LCN1-201ENST00000263598 KCNQ2O43526 872 aa12.92□□□□□ -0.34
LCN1-201ENST00000263598 USP6P35125 1406 aa12.92□□□□□ -0.34
LCN1-201ENST00000263598 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
LCN1-201ENST00000263598 PLSCR1O15162 318 aa12.91□□□□□ -0.34
LCN1-201ENST00000263598 YY1P25490 414 aa12.91□□□□□ -0.34
LCN1-201ENST00000263598 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
LCN1-201ENST00000263598 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
LCN1-201ENST00000263598 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
LCN1-201ENST00000263598 SLIT3O75094 1523 aa12.89□□□□□ -0.35
LCN1-201ENST00000263598 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
LCN1-201ENST00000263598 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
LCN1-201ENST00000263598 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
LCN1-201ENST00000263598 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
LCN1-201ENST00000263598 NINLQ9Y2I6 1382 aa12.88□□□□□ -0.35
LCN1-201ENST00000263598 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms