RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 NME9Q86XW9 330 aa22.26■■□□□ 1.15
COTL1-201ENST00000262428 PHF8Q9UPP1 1060 aa22.24■■□□□ 1.15
COTL1-201ENST00000262428 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
COTL1-201ENST00000262428 DCCP43146 1447 aa22.23■■□□□ 1.15
COTL1-201ENST00000262428 LRRC7Q96NW7 1537 aa22.23■■□□□ 1.15
COTL1-201ENST00000262428 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
COTL1-201ENST00000262428 MTHFSP49914 203 aa22.22■■□□□ 1.15
COTL1-201ENST00000262428 ESCO1Q5FWF5 840 aa22.22■■□□□ 1.15
COTL1-201ENST00000262428 TTC21AQ8NDW8 1320 aa22.21■■□□□ 1.15
COTL1-201ENST00000262428 ATF3P18847 181 aa22.2■■□□□ 1.14
COTL1-201ENST00000262428 C1orf167Q5SNV9 1468 aa22.2■■□□□ 1.14
COTL1-201ENST00000262428 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
COTL1-201ENST00000262428 COG3Q96JB2 828 aa22.19■■□□□ 1.14
COTL1-201ENST00000262428 ORAI2Q96SN7 254 aa22.19■■□□□ 1.14
COTL1-201ENST00000262428 MST1RQ04912 1400 aa22.18■■□□□ 1.14
COTL1-201ENST00000262428 MSH6P52701 1360 aa22.17■■□□□ 1.14
COTL1-201ENST00000262428 MAP2P11137 1827 aaKnown RBP22.16■■□□□ 1.14
COTL1-201ENST00000262428 INSRP06213 1382 aa22.16■■□□□ 1.14
COTL1-201ENST00000262428 CADPS2Q86UW7 1296 aa22.16■■□□□ 1.14
COTL1-201ENST00000262428 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
COTL1-201ENST00000262428 OVOS2A0A0J9YW53 1432 aa22.15■■□□□ 1.14
COTL1-201ENST00000262428 OVOS2Q6IE36 1432 aa22.15■■□□□ 1.14
COTL1-201ENST00000262428 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
COTL1-201ENST00000262428 KIF1AQ12756 1690 aa22.14■■□□□ 1.14
COTL1-201ENST00000262428 CFAP53Q96M91 514 aa22.14■■□□□ 1.13
COTL1-201ENST00000262428 PIK3C2AO00443 1686 aa22.14■■□□□ 1.13
COTL1-201ENST00000262428 SHPRHQ149N8 1683 aa22.14■■□□□ 1.13
COTL1-201ENST00000262428 AATKQ6ZMQ8 1374 aa22.14■■□□□ 1.13
COTL1-201ENST00000262428 USP31Q70CQ4 1352 aa22.14■■□□□ 1.13
COTL1-201ENST00000262428 FBLN1P23142 703 aa22.13■■□□□ 1.13
COTL1-201ENST00000262428 PSME1Q06323 249 aa22.13■■□□□ 1.13
COTL1-201ENST00000262428 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
COTL1-201ENST00000262428 BLMP54132 1417 aaPredicted RBP22.11■■□□□ 1.13
COTL1-201ENST00000262428 FOXO3O43524 673 aa22.1■■□□□ 1.13
COTL1-201ENST00000262428 PNPLA6Q8IY17 1366 aa22.1■■□□□ 1.13
COTL1-201ENST00000262428 COL3A1P02461 1466 aaPredicted RBP22.1■■□□□ 1.13
COTL1-201ENST00000262428 ZBED9Q6R2W3 1325 aa22.09■■□□□ 1.13
COTL1-201ENST00000262428 USP54Q70EL1 1684 aa22.09■■□□□ 1.13
COTL1-201ENST00000262428 MARF1Q9Y4F3 1742 aaKnown RBP22.09■■□□□ 1.13
COTL1-201ENST00000262428 SMG6Q86US8 1419 aaKnown RBP22.08■■□□□ 1.13
COTL1-201ENST00000262428 PAK3O75914 559 aaPredicted RBP22.08■■□□□ 1.13
COTL1-201ENST00000262428 ABTB2Q8N961 1025 aa22.07■■□□□ 1.12
COTL1-201ENST00000262428 NLRP6P59044 892 aa22.06■■□□□ 1.12
COTL1-201ENST00000262428 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
COTL1-201ENST00000262428 KRT28Q7Z3Y7 464 aa22.06■■□□□ 1.12
COTL1-201ENST00000262428 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
COTL1-201ENST00000262428 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
COTL1-201ENST00000262428 RRS1Q15050 365 aaKnown RBP22.04■■□□□ 1.12
COTL1-201ENST00000262428 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
COTL1-201ENST00000262428 NUTM2GQ5VZR2 741 aa22.03■■□□□ 1.12
COTL1-201ENST00000262428 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
COTL1-201ENST00000262428 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
COTL1-201ENST00000262428 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
COTL1-201ENST00000262428 SLAIN2Q9P270 581 aa22.02■■□□□ 1.12
COTL1-201ENST00000262428 DIAPH1O60610 1272 aaKnown RBP22.01■■□□□ 1.11
COTL1-201ENST00000262428 NUDCQ9Y266 331 aa22.01■■□□□ 1.11
COTL1-201ENST00000262428 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
COTL1-201ENST00000262428 NPHP3Q7Z494 1330 aa21.99■■□□□ 1.11
COTL1-201ENST00000262428 PEAK1Q9H792 1746 aa21.99■■□□□ 1.11
COTL1-201ENST00000262428 SOX12O15370 315 aa21.99■■□□□ 1.11
COTL1-201ENST00000262428 CCDC146Q8IYE0 955 aa21.99■■□□□ 1.11
COTL1-201ENST00000262428 DDX17Q92841 729 aaKnown RBP21.99■■□□□ 1.11
COTL1-201ENST00000262428 U2AF1L5P0DN76 240 aaPredicted RBP21.98■■□□□ 1.11
COTL1-201ENST00000262428 U2AF1Q01081 240 aaKnown RBP eCLIP21.98■■□□□ 1.11
COTL1-201ENST00000262428 ALS2Q96Q42 1657 aa21.97■■□□□ 1.11
COTL1-201ENST00000262428 MAP3K19Q56UN5 1328 aa21.97■■□□□ 1.11
COTL1-201ENST00000262428 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
COTL1-201ENST00000262428 IL13P35225 146 aa21.96■■□□□ 1.11
COTL1-201ENST00000262428 SBNO1A3KN83 1393 aa21.95■■□□□ 1.11
COTL1-201ENST00000262428 PXDNQ92626 1479 aa21.95■■□□□ 1.1
COTL1-201ENST00000262428 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
COTL1-201ENST00000262428 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
COTL1-201ENST00000262428 APAF1O14727 1248 aa21.93■■□□□ 1.1
COTL1-201ENST00000262428 LMOD2Q6P5Q4 547 aa21.93■■□□□ 1.1
COTL1-201ENST00000262428 NFAT5O94916 1531 aa21.93■■□□□ 1.1
COTL1-201ENST00000262428 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
COTL1-201ENST00000262428 SLIT3O75094 1523 aa21.92■■□□□ 1.1
COTL1-201ENST00000262428 KCNH5Q8NCM2 988 aa21.92■■□□□ 1.1
COTL1-201ENST00000262428 USP19O94966 1318 aa21.92■■□□□ 1.1
COTL1-201ENST00000262428 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
COTL1-201ENST00000262428 HSP90AB2PQ58FF8 381 aa21.91■■□□□ 1.1
COTL1-201ENST00000262428 FLT4P35916 1363 aa21.9■■□□□ 1.1
COTL1-201ENST00000262428 EIF4A2Q14240 407 aaKnown RBP21.9■■□□□ 1.1
COTL1-201ENST00000262428 LTN1O94822 1766 aa21.9■■□□□ 1.1
COTL1-201ENST00000262428 AMPHP49418 695 aa21.9■■□□□ 1.1
COTL1-201ENST00000262428 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
COTL1-201ENST00000262428 TNS3Q68CZ2 1445 aa21.89■■□□□ 1.09
COTL1-201ENST00000262428 SPATA31A3Q5VYP0 1347 aa21.89■■□□□ 1.09
COTL1-201ENST00000262428 SOS2Q07890 1332 aaPredicted RBP21.88■■□□□ 1.09
COTL1-201ENST00000262428 FCHSD2O94868 740 aa21.88■■□□□ 1.09
COTL1-201ENST00000262428 GCP02774 474 aa21.88■■□□□ 1.09
COTL1-201ENST00000262428 TCP11L2Q8N4U5 519 aa21.87■■□□□ 1.09
COTL1-201ENST00000262428 NGEFQ8N5V2 710 aa21.87■■□□□ 1.09
COTL1-201ENST00000262428 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
COTL1-201ENST00000262428 NHSL1Q5SYE7 1610 aa21.87■■□□□ 1.09
COTL1-201ENST00000262428 HOXC9P31274 260 aa21.87■■□□□ 1.09
COTL1-201ENST00000262428 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
COTL1-201ENST00000262428 MED1Q15648 1581 aaPredicted RBP21.86■■□□□ 1.09
COTL1-201ENST00000262428 ZNF521Q96K83 1311 aa21.86■■□□□ 1.09
COTL1-201ENST00000262428 RSPH6AQ9H0K4 717 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms