RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 SYCE3A1L190 88 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 NAIPQ13075 1403 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 SMC2O95347 1197 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 MCM5P33992 734 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 KRT85P78386 507 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 PCMTD1Q96MG8 357 aaPredicted RBP12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 CDR1P51861 262 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 TNMDQ9H2S6 317 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 H0YHG0 523 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 PDILTQ8N807 584 aa12.94□□□□□ -0.34
CSNK1A1-201ENST00000261798 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 CCDC47Q96A33 483 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-201ENST00000261798 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 FOSBP53539 338 aa12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 C1orf141Q5JVX7 400 aa12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 FMNL2Q96PY5 1086 aa12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
CSNK1A1-201ENST00000261798 MARCH6O60337 910 aa12.91□□□□□ -0.34
CSNK1A1-201ENST00000261798 GNAI2P04899 355 aa12.91□□□□□ -0.34
CSNK1A1-201ENST00000261798 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
CSNK1A1-201ENST00000261798 HIP1O00291 1037 aa12.91□□□□□ -0.34
CSNK1A1-201ENST00000261798 CBX1P83916 185 aa12.91□□□□□ -0.34
CSNK1A1-201ENST00000261798 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
CSNK1A1-201ENST00000261798 DYNC1I1O14576 645 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 TBC1D32Q96NH3 1257 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 PRDM10Q9NQV6 1147 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 XRCC6P12956 609 aaKnown RBP eCLIP12.9□□□□□ -0.347e-6■□□□□ 8.8
CSNK1A1-201ENST00000261798 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 EHBP1L1Q8N3D4 1523 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
CSNK1A1-201ENST00000261798 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 PDE4CQ08493 712 aa12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 APPP05067 770 aa12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 ANKRD1Q15327 319 aa12.89□□□□□ -0.35
CSNK1A1-201ENST00000261798 SSFA2P28290 1259 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 KIF2AO00139 706 aaPredicted RBP12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 TMEM57Q8N5G2 664 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 CCDC30Q5VVM6 783 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 SLC12A5Q9H2X9 1139 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
CSNK1A1-201ENST00000261798 ERLIN1O75477 346 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 STK38Q15208 465 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 CAGE1Q8TC20 777 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 FILIP1Q7Z7B0 1213 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 UBXN4Q92575 508 aa12.87□□□□□ -0.35
CSNK1A1-201ENST00000261798 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 TSPYL1Q9H0U9 437 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
CSNK1A1-201ENST00000261798 SERPINC1P01008 464 aa12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 AXDND1Q5T1B0 1012 aaPredicted RBP12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 CEBPZQ03701 1054 aaKnown RBP12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
CSNK1A1-201ENST00000261798 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
CSNK1A1-201ENST00000261798 NAP1L1P55209 391 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms