RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
HLA-F-216ENST00000259951 LTBP4Q8N2S1 1624 aa22.48■■□□□ 1.19
HLA-F-216ENST00000259951 PHF8Q9UPP1 1060 aa22.47■■□□□ 1.19
HLA-F-216ENST00000259951 TTC21AQ8NDW8 1320 aa22.47■■□□□ 1.19
HLA-F-216ENST00000259951 ATF3P18847 181 aa22.46■■□□□ 1.19
HLA-F-216ENST00000259951 TTC21BQ7Z4L5 1316 aa22.46■■□□□ 1.19
HLA-F-216ENST00000259951 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
HLA-F-216ENST00000259951 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.18
HLA-F-216ENST00000259951 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
HLA-F-216ENST00000259951 INSRP06213 1382 aa22.45■■□□□ 1.18
HLA-F-216ENST00000259951 MSH6P52701 1360 aa22.45■■□□□ 1.18
HLA-F-216ENST00000259951 SSH2Q76I76 1423 aa22.44■■□□□ 1.18
HLA-F-216ENST00000259951 COG3Q96JB2 828 aa22.44■■□□□ 1.18
HLA-F-216ENST00000259951 KIF1AQ12756 1690 aa22.44■■□□□ 1.18
HLA-F-216ENST00000259951 HNRNPUQ00839 825 aaKnown RBP eCLIP22.43■■□□□ 1.18
HLA-F-216ENST00000259951 ESCO1Q5FWF5 840 aa22.43■■□□□ 1.18
HLA-F-216ENST00000259951 CADPS2Q86UW7 1296 aa22.43■■□□□ 1.18
HLA-F-216ENST00000259951 NME9Q86XW9 330 aa22.43■■□□□ 1.18
HLA-F-216ENST00000259951 CFAP53Q96M91 514 aa22.43■■□□□ 1.18
HLA-F-216ENST00000259951 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
HLA-F-216ENST00000259951 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
HLA-F-216ENST00000259951 C1orf167Q5SNV9 1468 aa22.41■■□□□ 1.18
HLA-F-216ENST00000259951 MTHFSP49914 203 aa22.4■■□□□ 1.18
HLA-F-216ENST00000259951 MAP2P11137 1827 aaKnown RBP22.39■■□□□ 1.17
HLA-F-216ENST00000259951 MST1RQ04912 1400 aa22.38■■□□□ 1.17
HLA-F-216ENST00000259951 AATKQ6ZMQ8 1374 aa22.37■■□□□ 1.17
HLA-F-216ENST00000259951 PSME1Q06323 249 aa22.36■■□□□ 1.17
HLA-F-216ENST00000259951 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
HLA-F-216ENST00000259951 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
HLA-F-216ENST00000259951 USP31Q70CQ4 1352 aa22.36■■□□□ 1.17
HLA-F-216ENST00000259951 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
HLA-F-216ENST00000259951 PIK3C2AO00443 1686 aa22.35■■□□□ 1.17
HLA-F-216ENST00000259951 IQSEC2Q5JU85 1478 aa22.35■■□□□ 1.17
HLA-F-216ENST00000259951 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
HLA-F-216ENST00000259951 BLMP54132 1417 aaPredicted RBP22.33■■□□□ 1.17
HLA-F-216ENST00000259951 SHPRHQ149N8 1683 aa22.33■■□□□ 1.17
HLA-F-216ENST00000259951 ZRANB1Q9UGI0 708 aa22.33■■□□□ 1.17
HLA-F-216ENST00000259951 ZBED9Q6R2W3 1325 aa22.33■■□□□ 1.16
HLA-F-216ENST00000259951 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
HLA-F-216ENST00000259951 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
HLA-F-216ENST00000259951 PAK3O75914 559 aaPredicted RBP22.31■■□□□ 1.16
HLA-F-216ENST00000259951 POLKQ9UBT6 870 aa22.3■■□□□ 1.16
HLA-F-216ENST00000259951 PNPLA6Q8IY17 1366 aa22.29■■□□□ 1.16
HLA-F-216ENST00000259951 FOXO3O43524 673 aa22.29■■□□□ 1.16
HLA-F-216ENST00000259951 ABTB2Q8N961 1025 aa22.29■■□□□ 1.16
HLA-F-216ENST00000259951 NUDCQ9Y266 331 aa22.29■■□□□ 1.16
HLA-F-216ENST00000259951 NLRP6P59044 892 aa22.28■■□□□ 1.16
HLA-F-216ENST00000259951 CDK12Q9NYV4 1490 aaPredicted RBP22.28■■□□□ 1.16
HLA-F-216ENST00000259951 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.16
HLA-F-216ENST00000259951 TRPM3Q9HCF6 1732 aaPredicted RBP22.26■■□□□ 1.15
HLA-F-216ENST00000259951 MARF1Q9Y4F3 1742 aaKnown RBP22.26■■□□□ 1.15
HLA-F-216ENST00000259951 KRT28Q7Z3Y7 464 aa22.25■■□□□ 1.15
HLA-F-216ENST00000259951 NPHP3Q7Z494 1330 aa22.25■■□□□ 1.15
HLA-F-216ENST00000259951 UBAP1LF5GYI3 381 aa22.24■■□□□ 1.15
HLA-F-216ENST00000259951 PPM1GO15355 546 aaPredicted RBP22.24■■□□□ 1.15
HLA-F-216ENST00000259951 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
HLA-F-216ENST00000259951 SLAIN2Q9P270 581 aa22.23■■□□□ 1.15
HLA-F-216ENST00000259951 EMILIN1Q9Y6C2 1016 aa22.23■■□□□ 1.15
HLA-F-216ENST00000259951 FBLN1P23142 703 aa22.22■■□□□ 1.15
HLA-F-216ENST00000259951 RRS1Q15050 365 aaKnown RBP22.21■■□□□ 1.15
HLA-F-216ENST00000259951 SBNO1A3KN83 1393 aa22.2■■□□□ 1.15
HLA-F-216ENST00000259951 U2AF1L5P0DN76 240 aaPredicted RBP22.2■■□□□ 1.14
HLA-F-216ENST00000259951 U2AF1Q01081 240 aaKnown RBP eCLIP22.2■■□□□ 1.14
HLA-F-216ENST00000259951 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
HLA-F-216ENST00000259951 ALS2Q96Q42 1657 aa22.19■■□□□ 1.14
HLA-F-216ENST00000259951 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
HLA-F-216ENST00000259951 XPCQ01831 940 aaPredicted RBP22.19■■□□□ 1.14
HLA-F-216ENST00000259951 NUTM2GQ5VZR2 741 aa22.19■■□□□ 1.14
HLA-F-216ENST00000259951 KCNH5Q8NCM2 988 aa22.19■■□□□ 1.14
HLA-F-216ENST00000259951 PNNQ9H307 717 aaKnown RBP22.19■■□□□ 1.14
HLA-F-216ENST00000259951 U2SURPO15042 1029 aaKnown RBP22.18■■□□□ 1.14
HLA-F-216ENST00000259951 BRINP3Q76B58 766 aa22.18■■□□□ 1.14
HLA-F-216ENST00000259951 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
HLA-F-216ENST00000259951 MAP3K19Q56UN5 1328 aa22.16■■□□□ 1.14
HLA-F-216ENST00000259951 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
HLA-F-216ENST00000259951 SOX12O15370 315 aa22.16■■□□□ 1.14
HLA-F-216ENST00000259951 FLT4P35916 1363 aa22.15■■□□□ 1.14
HLA-F-216ENST00000259951 PXDNQ92626 1479 aa22.15■■□□□ 1.14
HLA-F-216ENST00000259951 TOM1O60784 492 aa22.15■■□□□ 1.14
HLA-F-216ENST00000259951 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
HLA-F-216ENST00000259951 SLIT3O75094 1523 aa22.15■■□□□ 1.14
HLA-F-216ENST00000259951 LTN1O94822 1766 aa22.14■■□□□ 1.14
HLA-F-216ENST00000259951 AMPHP49418 695 aa22.14■■□□□ 1.14
HLA-F-216ENST00000259951 PDE3BQ13370 1112 aa22.14■■□□□ 1.14
HLA-F-216ENST00000259951 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.14
HLA-F-216ENST00000259951 TNS3Q68CZ2 1445 aa22.13■■□□□ 1.13
HLA-F-216ENST00000259951 IL13P35225 146 aa22.13■■□□□ 1.13
HLA-F-216ENST00000259951 NFAT5O94916 1531 aa22.13■■□□□ 1.13
HLA-F-216ENST00000259951 RTL1A6NKG5 1358 aa22.12■■□□□ 1.13
HLA-F-216ENST00000259951 USP19O94966 1318 aa22.12■■□□□ 1.13
HLA-F-216ENST00000259951 ARHGEF10O15013 1369 aa22.12■■□□□ 1.13
HLA-F-216ENST00000259951 APAF1O14727 1248 aa22.11■■□□□ 1.13
HLA-F-216ENST00000259951 FCHSD2O94868 740 aa22.11■■□□□ 1.13
HLA-F-216ENST00000259951 PIP4K2BP78356 416 aa22.11■■□□□ 1.13
HLA-F-216ENST00000259951 NHSL1Q5SYE7 1610 aa22.11■■□□□ 1.13
HLA-F-216ENST00000259951 PHRF1Q9P1Y6 1649 aaKnown RBP22.11■■□□□ 1.13
HLA-F-216ENST00000259951 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
HLA-F-216ENST00000259951 DDX17Q92841 729 aaKnown RBP22.09■■□□□ 1.13
HLA-F-216ENST00000259951 SALL2Q9Y467 1007 aaPredicted RBP22.09■■□□□ 1.13
HLA-F-216ENST00000259951 SPATA31A3Q5VYP0 1347 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms