RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 USP54Q70EL1 1684 aa24.06■■□□□ 1.44
CCDC115-201ENST00000259229 MARF1Q9Y4F3 1742 aaKnown RBP24.06■■□□□ 1.44
CCDC115-201ENST00000259229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.06■■□□□ 1.44
CCDC115-201ENST00000259229 PHF8Q9UPP1 1060 aa24.06■■□□□ 1.44
CCDC115-201ENST00000259229 MORC1Q86VD1 984 aa24.05■■□□□ 1.44
CCDC115-201ENST00000259229 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
CCDC115-201ENST00000259229 NME9Q86XW9 330 aa24.04■■□□□ 1.44
CCDC115-201ENST00000259229 NGDNQ8NEJ9 315 aaKnown RBP24.03■■□□□ 1.44
CCDC115-201ENST00000259229 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
CCDC115-201ENST00000259229 OVOS2A0A0J9YW53 1432 aa24.03■■□□□ 1.44
CCDC115-201ENST00000259229 OVOS2Q6IE36 1432 aa24.03■■□□□ 1.44
CCDC115-201ENST00000259229 TRPM3Q9HCF6 1732 aaPredicted RBP24.03■■□□□ 1.44
CCDC115-201ENST00000259229 ATF3P18847 181 aa24.02■■□□□ 1.44
CCDC115-201ENST00000259229 ESCO1Q5FWF5 840 aa24.02■■□□□ 1.44
CCDC115-201ENST00000259229 CADPS2Q86UW7 1296 aa24.01■■□□□ 1.43
CCDC115-201ENST00000259229 ZRANB1Q9UGI0 708 aa24■■□□□ 1.43
CCDC115-201ENST00000259229 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
CCDC115-201ENST00000259229 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
CCDC115-201ENST00000259229 YTHDC1Q96MU7 727 aaKnown RBP23.99■■□□□ 1.43
CCDC115-201ENST00000259229 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
CCDC115-201ENST00000259229 TNNT2P45379 298 aaPredicted RBP23.97■■□□□ 1.43
CCDC115-201ENST00000259229 USP31Q70CQ4 1352 aa23.96■■□□□ 1.43
CCDC115-201ENST00000259229 SCAF1Q9H7N4 1312 aaKnown RBP23.96■■□□□ 1.43
CCDC115-201ENST00000259229 MAP2P11137 1827 aaKnown RBP23.95■■□□□ 1.42
CCDC115-201ENST00000259229 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
CCDC115-201ENST00000259229 COL3A1P02461 1466 aaPredicted RBP23.93■■□□□ 1.42
CCDC115-201ENST00000259229 ALS2Q96Q42 1657 aa23.93■■□□□ 1.42
CCDC115-201ENST00000259229 FAM9BQ8IZU0 186 aa23.92■■□□□ 1.42
CCDC115-201ENST00000259229 AATKQ6ZMQ8 1374 aa23.92■■□□□ 1.42
CCDC115-201ENST00000259229 COG3Q96JB2 828 aa23.92■■□□□ 1.42
CCDC115-201ENST00000259229 FOXO3O43524 673 aa23.91■■□□□ 1.42
CCDC115-201ENST00000259229 PXDNQ92626 1479 aa23.9■■□□□ 1.42
CCDC115-201ENST00000259229 MTHFSP49914 203 aa23.9■■□□□ 1.42
CCDC115-201ENST00000259229 FBLN1P23142 703 aa23.88■■□□□ 1.41
CCDC115-201ENST00000259229 NHSL1Q5SYE7 1610 aa23.88■■□□□ 1.41
CCDC115-201ENST00000259229 PSME1Q06323 249 aa23.88■■□□□ 1.41
CCDC115-201ENST00000259229 BRINP3Q76B58 766 aa23.88■■□□□ 1.41
CCDC115-201ENST00000259229 PEAK1Q9H792 1746 aa23.88■■□□□ 1.41
CCDC115-201ENST00000259229 PNPLA6Q8IY17 1366 aa23.86■■□□□ 1.41
CCDC115-201ENST00000259229 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
CCDC115-201ENST00000259229 BLMP54132 1417 aaPredicted RBP23.85■■□□□ 1.41
CCDC115-201ENST00000259229 CDK12Q9NYV4 1490 aaPredicted RBP23.85■■□□□ 1.41
CCDC115-201ENST00000259229 XPCQ01831 940 aaPredicted RBP23.85■■□□□ 1.41
CCDC115-201ENST00000259229 POLKQ9UBT6 870 aa23.85■■□□□ 1.41
CCDC115-201ENST00000259229 INSRP06213 1382 aa23.85■■□□□ 1.41
CCDC115-201ENST00000259229 KRT28Q7Z3Y7 464 aa23.84■■□□□ 1.41
CCDC115-201ENST00000259229 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
CCDC115-201ENST00000259229 SLIT3O75094 1523 aa23.83■■□□□ 1.41
CCDC115-201ENST00000259229 NFAT5O94916 1531 aa23.83■■□□□ 1.41
CCDC115-201ENST00000259229 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.41
CCDC115-201ENST00000259229 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
CCDC115-201ENST00000259229 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
CCDC115-201ENST00000259229 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
CCDC115-201ENST00000259229 NPHP3Q7Z494 1330 aa23.82■■□□□ 1.4
CCDC115-201ENST00000259229 EMILIN1Q9Y6C2 1016 aa23.81■■□□□ 1.4
CCDC115-201ENST00000259229 SBNO1A3KN83 1393 aa23.81■■□□□ 1.4
CCDC115-201ENST00000259229 ROBO1Q9Y6N7 1651 aa23.81■■□□□ 1.4
CCDC115-201ENST00000259229 NLRP6P59044 892 aa23.81■■□□□ 1.4
CCDC115-201ENST00000259229 NUTM2GQ5VZR2 741 aa23.8■■□□□ 1.4
CCDC115-201ENST00000259229 LTN1O94822 1766 aa23.8■■□□□ 1.4
CCDC115-201ENST00000259229 MED1Q15648 1581 aaPredicted RBP23.79■■□□□ 1.4
CCDC115-201ENST00000259229 RRS1Q15050 365 aaKnown RBP23.79■■□□□ 1.4
CCDC115-201ENST00000259229 ADAMTS8Q9UP79 889 aa23.79■■□□□ 1.4
CCDC115-201ENST00000259229 TNS3Q68CZ2 1445 aa23.78■■□□□ 1.4
CCDC115-201ENST00000259229 PHRF1Q9P1Y6 1649 aaKnown RBP23.78■■□□□ 1.4
CCDC115-201ENST00000259229 CFAP53Q96M91 514 aa23.77■■□□□ 1.4
CCDC115-201ENST00000259229 USP19O94966 1318 aa23.77■■□□□ 1.4
CCDC115-201ENST00000259229 HNRNPUQ00839 825 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCDC115-201ENST00000259229 SOS2Q07890 1332 aaPredicted RBP23.75■■□□□ 1.39
CCDC115-201ENST00000259229 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
CCDC115-201ENST00000259229 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
CCDC115-201ENST00000259229 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
CCDC115-201ENST00000259229 SPATA31A3Q5VYP0 1347 aa23.73■■□□□ 1.39
CCDC115-201ENST00000259229 RGPD1P0DJD0 1748 aa23.73■■□□□ 1.39
CCDC115-201ENST00000259229 SOX12O15370 315 aa23.72■■□□□ 1.39
CCDC115-201ENST00000259229 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
CCDC115-201ENST00000259229 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
CCDC115-201ENST00000259229 IQSEC2Q5JU85 1478 aa23.71■■□□□ 1.39
CCDC115-201ENST00000259229 FLT4P35916 1363 aa23.69■■□□□ 1.38
CCDC115-201ENST00000259229 KIF24Q5T7B8 1368 aa23.69■■□□□ 1.38
CCDC115-201ENST00000259229 DIAPH1O60610 1272 aaKnown RBP23.69■■□□□ 1.38
CCDC115-201ENST00000259229 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
CCDC115-201ENST00000259229 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
CCDC115-201ENST00000259229 IL13P35225 146 aa23.67■■□□□ 1.38
CCDC115-201ENST00000259229 RTL1A6NKG5 1358 aa23.67■■□□□ 1.38
CCDC115-201ENST00000259229 LMOD2Q6P5Q4 547 aa23.66■■□□□ 1.38
CCDC115-201ENST00000259229 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
CCDC115-201ENST00000259229 GCP02774 474 aa23.65■■□□□ 1.38
CCDC115-201ENST00000259229 CENPBP07199 599 aaPredicted RBP23.65■■□□□ 1.38
CCDC115-201ENST00000259229 HSP90AB2PQ58FF8 381 aa23.65■■□□□ 1.38
CCDC115-201ENST00000259229 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.38
CCDC115-201ENST00000259229 COL16A1Q07092 1604 aaPredicted RBP23.63■■□□□ 1.37
CCDC115-201ENST00000259229 EIF4A2Q14240 407 aaKnown RBP23.63■■□□□ 1.37
CCDC115-201ENST00000259229 CCDC146Q8IYE0 955 aa23.63■■□□□ 1.37
CCDC115-201ENST00000259229 NUDCQ9Y266 331 aa23.63■■□□□ 1.37
CCDC115-201ENST00000259229 COL18A1P39060 1754 aa23.63■■□□□ 1.37
CCDC115-201ENST00000259229 U2AF1L5P0DN76 240 aaPredicted RBP23.62■■□□□ 1.37
CCDC115-201ENST00000259229 U2AF1Q01081 240 aaKnown RBP eCLIP23.62■■□□□ 1.37
CCDC115-201ENST00000259229 FBXO41Q8TF61 875 aa23.62■■□□□ 1.37
CCDC115-201ENST00000259229 HOXC9P31274 260 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms