RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 NUTM2GQ5VZR2 741 aa27.12■■□□□ 1.93
PAX3-201ENST00000258387 BLMP54132 1417 aaPredicted RBP27.12■■□□□ 1.93
PAX3-201ENST00000258387 PRDM11Q9NQV5 511 aa27.11■■□□□ 1.93
PAX3-201ENST00000258387 PLCH1Q4KWH8 1693 aa27.11■■□□□ 1.93
PAX3-201ENST00000258387 TRPM3Q9HCF6 1732 aaPredicted RBP27.1■■□□□ 1.93
PAX3-201ENST00000258387 CCDC61Q9Y6R9 512 aa27.09■■□□□ 1.93
PAX3-201ENST00000258387 ABCA3Q99758 1704 aa27.09■■□□□ 1.93
PAX3-201ENST00000258387 NWD2Q9ULI1 1742 aa27.08■■□□□ 1.93
PAX3-201ENST00000258387 NBPF8Q3BBV2 869 aa27.08■■□□□ 1.93
PAX3-201ENST00000258387 ACEP12821 1306 aa27.08■■□□□ 1.93
PAX3-201ENST00000258387 ATP7BP35670 1465 aa27.07■■□□□ 1.92
PAX3-201ENST00000258387 CHRNA2Q15822 529 aa27.07■■□□□ 1.92
PAX3-201ENST00000258387 ALS2Q96Q42 1657 aa27.06■■□□□ 1.92
PAX3-201ENST00000258387 ZC3H6P61129 1189 aaKnown RBP27.06■■□□□ 1.92
PAX3-201ENST00000258387 ARHGEF28Q8N1W1 1705 aaKnown RBP27.05■■□□□ 1.92
PAX3-201ENST00000258387 BRWD3Q6RI45 1802 aa27.05■■□□□ 1.92
PAX3-201ENST00000258387 SPATA31A5Q5VU36 1347 aa27.05■■□□□ 1.92
PAX3-201ENST00000258387 SPATA31A7Q8IWB4 1347 aa27.05■■□□□ 1.92
PAX3-201ENST00000258387 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
PAX3-201ENST00000258387 PLEKHG3A1L390 1219 aa27.03■■□□□ 1.92
PAX3-201ENST00000258387 SRPK2P78362 688 aaKnown RBP27.03■■□□□ 1.92
PAX3-201ENST00000258387 FAM182BQ5T319 152 aa27.03■■□□□ 1.92
PAX3-201ENST00000258387 STRN4Q9NRL3 753 aa27.03■■□□□ 1.92
PAX3-201ENST00000258387 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
PAX3-201ENST00000258387 COL14A1Q05707 1796 aaKnown RBP27.01■■□□□ 1.91
PAX3-201ENST00000258387 CABP2Q9NPB3 220 aa27■■□□□ 1.91
PAX3-201ENST00000258387 POLR3AO14802 1390 aaPredicted RBP26.99■■□□□ 1.91
PAX3-201ENST00000258387 CENPJQ9HC77 1338 aaPredicted RBP26.99■■□□□ 1.91
PAX3-201ENST00000258387 EVA1CP58658 441 aa26.98■■□□□ 1.91
PAX3-201ENST00000258387 L3MBTL2Q969R5 705 aa26.98■■□□□ 1.91
PAX3-201ENST00000258387 NRAPQ86VF7 1730 aa26.97■■□□□ 1.91
PAX3-201ENST00000258387 BAG6P46379 1132 aa26.96■■□□□ 1.91
PAX3-201ENST00000258387 SIN3AQ96ST3 1273 aa26.96■■□□□ 1.91
PAX3-201ENST00000258387 USP35Q9P2H5 1018 aa26.96■■□□□ 1.91
PAX3-201ENST00000258387 SPATA31A1Q5TZJ5 1347 aa26.95■■□□□ 1.91
PAX3-201ENST00000258387 ITSN1Q15811 1721 aa26.94■■□□□ 1.9
PAX3-201ENST00000258387 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
PAX3-201ENST00000258387 KIAA1210Q9ULL0 1709 aa26.93■■□□□ 1.9
PAX3-201ENST00000258387 PPIP5K1Q6PFW1 1433 aa26.92■■□□□ 1.9
PAX3-201ENST00000258387 EN1Q05925 392 aaPredicted RBP26.91■■□□□ 1.9
PAX3-201ENST00000258387 NLRP13Q86W25 1043 aa26.91■■□□□ 1.9
PAX3-201ENST00000258387 CABP1Q9NZU7 370 aa26.91■■□□□ 1.9
PAX3-201ENST00000258387 CRYBG1Q9Y4K1 1723 aa26.9■■□□□ 1.9
PAX3-201ENST00000258387 PSDA5PKW4 1024 aaPredicted RBP26.88■■□□□ 1.89
PAX3-201ENST00000258387 LARP1Q6PKG0 1096 aaKnown RBP26.88■■□□□ 1.89
PAX3-201ENST00000258387 ZBTB7CA1YPR0 619 aa26.87■■□□□ 1.89
PAX3-201ENST00000258387 GCP02774 474 aa26.87■■□□□ 1.89
PAX3-201ENST00000258387 USP19O94966 1318 aa26.86■■□□□ 1.89
PAX3-201ENST00000258387 TOPAZ1Q8N9V7 1692 aa26.85■■□□□ 1.89
PAX3-201ENST00000258387 PHRF1Q9P1Y6 1649 aaKnown RBP26.84■■□□□ 1.89
PAX3-201ENST00000258387 TRIM37O94972 964 aa26.84■■□□□ 1.89
PAX3-201ENST00000258387 NLRP6P59044 892 aa26.84■■□□□ 1.89
PAX3-201ENST00000258387 FAM196AQ6ZSG2 479 aa26.84■■□□□ 1.89
PAX3-201ENST00000258387 SSH2Q76I76 1423 aa26.83■■□□□ 1.89
PAX3-201ENST00000258387 PDE3BQ13370 1112 aa26.83■■□□□ 1.89
PAX3-201ENST00000258387 BARGINQ6ZT62 677 aa26.82■■□□□ 1.88
PAX3-201ENST00000258387 TCP11L2Q8N4U5 519 aa26.82■■□□□ 1.88
PAX3-201ENST00000258387 EVC2Q86UK5 1308 aa26.82■■□□□ 1.88
PAX3-201ENST00000258387 CPDO75976 1380 aa26.82■■□□□ 1.88
PAX3-201ENST00000258387 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
PAX3-201ENST00000258387 THSD7AQ9UPZ6 1657 aa26.8■■□□□ 1.88
PAX3-201ENST00000258387 EZH2Q15910 746 aaKnown RBP26.8■■□□□ 1.88
PAX3-201ENST00000258387 ROCK2O75116 1388 aaKnown RBP26.79■■□□□ 1.88
PAX3-201ENST00000258387 APBA3O96018 575 aa26.78■■□□□ 1.88
PAX3-201ENST00000258387 NRKQ7Z2Y5 1582 aa26.78■■□□□ 1.88
PAX3-201ENST00000258387 USP6P35125 1406 aa26.77■■□□□ 1.88
PAX3-201ENST00000258387 BRD4O60885 1362 aaPredicted RBP26.77■■□□□ 1.88
PAX3-201ENST00000258387 R3HDM1Q15032 1099 aaKnown RBP26.76■■□□□ 1.87
PAX3-201ENST00000258387 QRICH2Q9H0J4 1663 aa26.76■■□□□ 1.87
PAX3-201ENST00000258387 CAMKK2Q96RR4 588 aa26.74■■□□□ 1.87
PAX3-201ENST00000258387 THRAP3Q9Y2W1 955 aaKnown RBP26.74■■□□□ 1.87
PAX3-201ENST00000258387 ZNF692Q9BU19 519 aaPredicted RBP26.72■■□□□ 1.87
PAX3-201ENST00000258387 SOX12O15370 315 aa26.71■■□□□ 1.87
PAX3-201ENST00000258387 RGPD1P0DJD0 1748 aa26.7■■□□□ 1.87
PAX3-201ENST00000258387 DISP2A7MBM2 1401 aa26.7■■□□□ 1.86
PAX3-201ENST00000258387 TTC21BQ7Z4L5 1316 aa26.69■■□□□ 1.86
PAX3-201ENST00000258387 COL5A2P05997 1499 aaPredicted RBP26.69■■□□□ 1.86
PAX3-201ENST00000258387 TOM1L2Q6ZVM7 507 aa26.69■■□□□ 1.86
PAX3-201ENST00000258387 AATKQ6ZMQ8 1374 aa26.69■■□□□ 1.86
PAX3-201ENST00000258387 AXIN2Q9Y2T1 843 aa26.68■■□□□ 1.86
PAX3-201ENST00000258387 LMO7Q8WWI1 1683 aa26.68■■□□□ 1.86
PAX3-201ENST00000258387 TRPM1Q7Z4N2 1603 aa26.67■■□□□ 1.86
PAX3-201ENST00000258387 CRB1P82279 1406 aa26.66■■□□□ 1.86
PAX3-201ENST00000258387 KCNH5Q8NCM2 988 aa26.64■■□□□ 1.86
PAX3-201ENST00000258387 CARD11Q9BXL7 1154 aa26.64■■□□□ 1.86
PAX3-201ENST00000258387 ARHGEF25Q86VW2 580 aa26.63■■□□□ 1.85
PAX3-201ENST00000258387 SLIT3O75094 1523 aa26.63■■□□□ 1.85
PAX3-201ENST00000258387 TNS1Q9HBL0 1735 aaKnown RBP26.62■■□□□ 1.85
PAX3-201ENST00000258387 DDB1Q16531 1140 aa26.62■■□□□ 1.85
PAX3-201ENST00000258387 KTN1Q86UP2 1357 aaKnown RBP26.61■■□□□ 1.85
PAX3-201ENST00000258387 CSB-PGBD3P0DP91 1061 aa26.61■■□□□ 1.85
PAX3-201ENST00000258387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.61■■□□□ 1.85
PAX3-201ENST00000258387 TTC21AQ8NDW8 1320 aa26.61■■□□□ 1.85
PAX3-201ENST00000258387 TMC1Q8TDI8 760 aa26.6■■□□□ 1.85
PAX3-201ENST00000258387 WDR17Q8IZU2 1322 aa26.6■■□□□ 1.85
PAX3-201ENST00000258387 PARD3Q8TEW0 1356 aa26.59■■□□□ 1.85
PAX3-201ENST00000258387 PIK3C2AO00443 1686 aa26.58■■□□□ 1.85
PAX3-201ENST00000258387 NBPF14Q5TI25 921 aa26.58■■□□□ 1.85
PAX3-201ENST00000258387 CPSF1Q10570 1443 aaKnown RBP26.57■■□□□ 1.84
PAX3-201ENST00000258387 C11orf95C9JLR9 678 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms