RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ATF7IPQ6VMQ6 1270 aa14.34□□□□□ -0.11
TROAP-201ENST00000257909 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.11
TROAP-201ENST00000257909 INO80Q9ULG1 1556 aaPredicted RBP14.33□□□□□ -0.12
TROAP-201ENST00000257909 USP32Q8NFA0 1604 aa14.33□□□□□ -0.12
TROAP-201ENST00000257909 KIF16BQ96L93 1317 aa14.33□□□□□ -0.12
TROAP-201ENST00000257909 ADGRB2O60241 1585 aa14.33□□□□□ -0.12
TROAP-201ENST00000257909 BMP2KLQ5H9B9 411 aa14.33□□□□□ -0.12
TROAP-201ENST00000257909 CFAP70Q5T0N1 1121 aa14.32□□□□□ -0.12
TROAP-201ENST00000257909 ARHGAP31Q2M1Z3 1444 aa14.32□□□□□ -0.12
TROAP-201ENST00000257909 MTHFSP49914 203 aa14.32□□□□□ -0.12
TROAP-201ENST00000257909 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
TROAP-201ENST00000257909 KIF2CQ99661 725 aa14.32□□□□□ -0.12
TROAP-201ENST00000257909 ZBTB40Q9NUA8 1239 aa14.32□□□□□ -0.12
TROAP-201ENST00000257909 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
TROAP-201ENST00000257909 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
TROAP-201ENST00000257909 KIF1BO60333 1816 aa14.31□□□□□ -0.12
TROAP-201ENST00000257909 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
TROAP-201ENST00000257909 ZNF445P59923 1031 aa14.3□□□□□ -0.12
TROAP-201ENST00000257909 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
TROAP-201ENST00000257909 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
TROAP-201ENST00000257909 ATP7AQ04656 1500 aa14.29□□□□□ -0.12
TROAP-201ENST00000257909 ABCC11Q96J66 1382 aa14.29□□□□□ -0.12
TROAP-201ENST00000257909 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
TROAP-201ENST00000257909 IPO8O15397 1037 aaKnown RBP14.29□□□□□ -0.12
TROAP-201ENST00000257909 RIPK4P57078 832 aa14.29□□□□□ -0.12
TROAP-201ENST00000257909 EXOSC9Q06265 439 aaKnown RBP14.29□□□□□ -0.12
TROAP-201ENST00000257909 SSH1Q8WYL5 1049 aa14.29□□□□□ -0.12
TROAP-201ENST00000257909 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
TROAP-201ENST00000257909 ZNF500O60304 480 aaPredicted RBP14.29□□□□□ -0.12
TROAP-201ENST00000257909 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
TROAP-201ENST00000257909 SSFA2P28290 1259 aa14.29□□□□□ -0.12
TROAP-201ENST00000257909 UHRF1BP1LA0JNW5 1464 aa14.28□□□□□ -0.12
TROAP-201ENST00000257909 MTERF4Q7Z6M4 381 aaKnown RBP14.28□□□□□ -0.12
TROAP-201ENST00000257909 TMEM57Q8N5G2 664 aa14.28□□□□□ -0.12
TROAP-201ENST00000257909 LNPKQ9C0E8 428 aa14.28□□□□□ -0.12
TROAP-201ENST00000257909 NOB1Q9ULX3 412 aaKnown RBP14.28□□□□□ -0.12
TROAP-201ENST00000257909 NOL7Q9UMY1 257 aaKnown RBP14.28□□□□□ -0.12
TROAP-201ENST00000257909 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
TROAP-201ENST00000257909 ARAP3Q8WWN8 1544 aa14.28□□□□□ -0.12
TROAP-201ENST00000257909 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
TROAP-201ENST00000257909 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
TROAP-201ENST00000257909 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
TROAP-201ENST00000257909 NOS1P29475 1434 aa14.27□□□□□ -0.12
TROAP-201ENST00000257909 IL16Q14005 1332 aa14.27□□□□□ -0.13
TROAP-201ENST00000257909 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
TROAP-201ENST00000257909 NSD2O96028 1365 aa14.26□□□□□ -0.13
TROAP-201ENST00000257909 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
TROAP-201ENST00000257909 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
TROAP-201ENST00000257909 SETBP1Q9Y6X0 1596 aa14.26□□□□□ -0.13
TROAP-201ENST00000257909 PPRC1Q5VV67 1664 aaKnown RBP14.26□□□□□ -0.13
TROAP-201ENST00000257909 NUCB2P80303 420 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 CSPP1Q1MSJ5 1256 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 GCC1Q96CN9 775 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 PDLIM2Q96JY6 352 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 R3HCC1Q9Y3T6 440 aaKnown RBP14.25□□□□□ -0.13
TROAP-201ENST00000257909 MCM5P33992 734 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
TROAP-201ENST00000257909 REREQ9P2R6 1566 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
TROAP-201ENST00000257909 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
TROAP-201ENST00000257909 EFCAB6Q5THR3 1501 aa14.24□□□□□ -0.13
TROAP-201ENST00000257909 TBC1D9Q6ZT07 1266 aa14.24□□□□□ -0.13
TROAP-201ENST00000257909 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
TROAP-201ENST00000257909 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
TROAP-201ENST00000257909 FAM13BQ9NYF5 915 aa14.23□□□□□ -0.13
TROAP-201ENST00000257909 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
TROAP-201ENST00000257909 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
TROAP-201ENST00000257909 PRDM4Q9UKN5 801 aa14.23□□□□□ -0.13
TROAP-201ENST00000257909 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
TROAP-201ENST00000257909 DYNC1I1O14576 645 aa14.22□□□□□ -0.13
TROAP-201ENST00000257909 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
TROAP-201ENST00000257909 UQCRHLA0A096LP55 91 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 UQCRHP07919 91 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 RABEP1Q15276 862 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 MCTP1Q6DN14 999 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 CAVIN1Q6NZI2 390 aaKnown RBP14.21□□□□□ -0.13
TROAP-201ENST00000257909 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 ZKSCAN5Q9Y2L8 839 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 CFAP65Q6ZU64 1925 aaKnown RBP14.21□□□□□ -0.13
TROAP-201ENST00000257909 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 PLEKHF1Q96S99 279 aa14.21□□□□□ -0.13
TROAP-201ENST00000257909 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
TROAP-201ENST00000257909 MED14O60244 1454 aa14.21□□□□□ -0.14
TROAP-201ENST00000257909 PPLO60437 1756 aa14.21□□□□□ -0.14
TROAP-201ENST00000257909 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.14
TROAP-201ENST00000257909 CDC45O75419 566 aa14.2□□□□□ -0.14
TROAP-201ENST00000257909 ZNF428Q96B54 188 aa14.2□□□□□ -0.14
TROAP-201ENST00000257909 PUS7Q96PZ0 661 aaKnown RBP14.2□□□□□ -0.14
TROAP-201ENST00000257909 LMBRD1Q9NUN5 540 aa14.2□□□□□ -0.14
TROAP-201ENST00000257909 AK9Q5TCS8 1911 aa14.2□□□□□ -0.14
TROAP-201ENST00000257909 CYP2E1P05181 493 aaPredicted RBP14.2□□□□□ -0.14
TROAP-201ENST00000257909 NCLP19338 710 aaKnown RBP14.2□□□□□ -0.14
TROAP-201ENST00000257909 SMAP1Q8IYB5 467 aaPredicted RBP14.2□□□□□ -0.14
TROAP-201ENST00000257909 RBSNQ9H1K0 784 aa14.2□□□□□ -0.14
TROAP-201ENST00000257909 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
TROAP-201ENST00000257909 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
TROAP-201ENST00000257909 FANCAO15360 1455 aa14.2□□□□□ -0.14
TROAP-201ENST00000257909 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms