RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0
USP30-201ENST00000257548 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
USP30-201ENST00000257548 CCDC27Q2M243 656 aa15.08■□□□□ 0
USP30-201ENST00000257548 CD2BP2O95400 341 aaKnown RBP15.07■□□□□ 0
USP30-201ENST00000257548 KLHL40Q2TBA0 621 aa15.07■□□□□ 0
USP30-201ENST00000257548 TTC37Q6PGP7 1564 aa15.07■□□□□ 0
USP30-201ENST00000257548 RBSNQ9H1K0 784 aa15.07■□□□□ 0
USP30-201ENST00000257548 AAMPQ13685 434 aa15.07■□□□□ 0
USP30-201ENST00000257548 RAB3GAP1Q15042 981 aa15.07■□□□□ 0
USP30-201ENST00000257548 WDR63Q8IWG1 891 aa15.06■□□□□ 0
USP30-201ENST00000257548 NPHP1O15259 732 aa15.06■□□□□ 0
USP30-201ENST00000257548 MCCP23508 829 aa15.06■□□□□ 0
USP30-201ENST00000257548 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
USP30-201ENST00000257548 ZGPATQ8N5A5 531 aaKnown RBP15.06■□□□□ 0
USP30-201ENST00000257548 USP25Q9UHP3 1055 aa15.06■□□□□ 0
USP30-201ENST00000257548 CARD14Q9BXL6 1004 aa15.05■□□□□ 0
USP30-201ENST00000257548 SMARCA5O60264 1052 aaPredicted RBP15.05■□□□□ -0
USP30-201ENST00000257548 KCNJ4P48050 445 aa15.05■□□□□ -0
USP30-201ENST00000257548 PKP1Q13835 747 aa15.05■□□□□ -0
USP30-201ENST00000257548 SCAPERQ9BY12 1400 aa15.05■□□□□ -0
USP30-201ENST00000257548 DTNBO60941 627 aa15.05■□□□□ -0
USP30-201ENST00000257548 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
USP30-201ENST00000257548 PRAG1Q86YV5 1406 aa15.05■□□□□ -0
USP30-201ENST00000257548 RABEP1Q15276 862 aa15.04■□□□□ -0
USP30-201ENST00000257548 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
USP30-201ENST00000257548 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
USP30-201ENST00000257548 TTC12Q9H892 705 aaPredicted RBP15.04■□□□□ -0
USP30-201ENST00000257548 A2MP01023 1474 aa15.04■□□□□ -0
USP30-201ENST00000257548 KDM5CP41229 1560 aa15.04■□□□□ -0
USP30-201ENST00000257548 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
USP30-201ENST00000257548 TSPY26PQ9H489 355 aa15.04■□□□□ -0
USP30-201ENST00000257548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.04■□□□□ -0
USP30-201ENST00000257548 FIBPO43427 364 aa15.03■□□□□ -0
USP30-201ENST00000257548 FBLN1P23142 703 aa15.03■□□□□ -0
USP30-201ENST00000257548 BLMP54132 1417 aaPredicted RBP15.03■□□□□ -0
USP30-201ENST00000257548 NECTIN2Q92692 538 aa15.03■□□□□ -0
USP30-201ENST00000257548 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
USP30-201ENST00000257548 MTERF4Q7Z6M4 381 aaKnown RBP15.03■□□□□ -0
USP30-201ENST00000257548 REC8O95072 547 aa15.02■□□□□ -0
USP30-201ENST00000257548 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
USP30-201ENST00000257548 MINK1Q8N4C8 1332 aaPredicted RBP15.02■□□□□ -0
USP30-201ENST00000257548 ZMYM4Q5VZL5 1548 aa15.02■□□□□ -0
USP30-201ENST00000257548 SASS6Q6UVJ0 657 aa15.02□□□□□ -0.01
USP30-201ENST00000257548 SMC5Q8IY18 1101 aa15.02□□□□□ -0.01
USP30-201ENST00000257548 C16orf71Q8IYS4 520 aaPredicted RBP15.02□□□□□ -0.01
USP30-201ENST00000257548 TMPOP42166 694 aaKnown RBP15.02□□□□□ -0.01
USP30-201ENST00000257548 ZNF521Q96K83 1311 aa15.02□□□□□ -0.01
USP30-201ENST00000257548 DIAPH1O60610 1272 aaKnown RBP15.01□□□□□ -0.01
USP30-201ENST00000257548 PHF14O94880 888 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 ZKSCAN5Q9Y2L8 839 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 GPRASP1Q5JY77 1395 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 TSHZ3Q63HK5 1081 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
USP30-201ENST00000257548 ADGRF5Q8IZF2 1346 aa15□□□□□ -0.01
USP30-201ENST00000257548 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
USP30-201ENST00000257548 KIF3AQ9Y496 699 aa15□□□□□ -0.01
USP30-201ENST00000257548 CGNQ9P2M7 1197 aaKnown RBP15□□□□□ -0.01
USP30-201ENST00000257548 OS9Q13438 667 aaPredicted RBP14.99□□□□□ -0.01
USP30-201ENST00000257548 NAP1L2Q9ULW6 460 aaPredicted RBP14.99□□□□□ -0.01
USP30-201ENST00000257548 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
USP30-201ENST00000257548 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
USP30-201ENST00000257548 CHD1O14646 1710 aa14.99□□□□□ -0.01
USP30-201ENST00000257548 CDC42BPBQ9Y5S2 1711 aa14.99□□□□□ -0.01
USP30-201ENST00000257548 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
USP30-201ENST00000257548 RAPGEF3O95398 923 aa14.99□□□□□ -0.01
USP30-201ENST00000257548 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
USP30-201ENST00000257548 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
USP30-201ENST00000257548 NUCB1Q02818 461 aa14.98□□□□□ -0.01
USP30-201ENST00000257548 PDCL2Q8N4E4 241 aa14.98□□□□□ -0.01
USP30-201ENST00000257548 TRERF1Q96PN7 1200 aa14.98□□□□□ -0.01
USP30-201ENST00000257548 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 GCC1Q96CN9 775 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 MBD3O95983 291 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 SHANK2Q9UPX8 1470 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 CROCC2H7BZ55 1655 aa14.97□□□□□ -0.01
USP30-201ENST00000257548 SNX21Q969T3 373 aa14.96□□□□□ -0.01
USP30-201ENST00000257548 KANK1Q14678 1352 aa14.96□□□□□ -0.01
USP30-201ENST00000257548 HCLS1P14317 486 aaPredicted RBP14.96□□□□□ -0.01
USP30-201ENST00000257548 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
USP30-201ENST00000257548 DCTN1Q14203 1278 aa14.96□□□□□ -0.01
USP30-201ENST00000257548 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
USP30-201ENST00000257548 BBXQ8WY36 941 aaPredicted RBP14.96□□□□□ -0.01
USP30-201ENST00000257548 NOL7Q9UMY1 257 aaKnown RBP14.96□□□□□ -0.01
USP30-201ENST00000257548 ADCY10Q96PN6 1610 aa14.96□□□□□ -0.02
USP30-201ENST00000257548 HMGN5P82970 282 aaKnown RBP14.95□□□□□ -0.02
USP30-201ENST00000257548 ERICH4A6NGS2 130 aa14.95□□□□□ -0.02
USP30-201ENST00000257548 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP30-201ENST00000257548 MAP4K4O95819 1239 aaPredicted RBP14.94□□□□□ -0.02
USP30-201ENST00000257548 TWISTNBQ3B726 338 aaPredicted RBP14.94□□□□□ -0.02
USP30-201ENST00000257548 HDGFL2Q7Z4V5 671 aaPredicted RBP14.94□□□□□ -0.02
USP30-201ENST00000257548 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
USP30-201ENST00000257548 GOLGA6L6A8MZA4 724 aa14.94□□□□□ -0.02
USP30-201ENST00000257548 DDX54Q8TDD1 881 aaKnown RBP14.94□□□□□ -0.02
USP30-201ENST00000257548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP30-201ENST00000257548 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP30-201ENST00000257548 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms