RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TRPM1Q7Z4N2 1603 aa15.23■□□□□ 0.03
CCNA1-201ENST00000255465 PIP4K2BP78356 416 aa15.21■□□□□ 0.03
CCNA1-201ENST00000255465 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
CCNA1-201ENST00000255465 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
CCNA1-201ENST00000255465 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
CCNA1-201ENST00000255465 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
CCNA1-201ENST00000255465 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
CCNA1-201ENST00000255465 ARHGEF28Q8N1W1 1705 aaKnown RBP15.2■□□□□ 0.02
CCNA1-201ENST00000255465 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
CCNA1-201ENST00000255465 TAF3Q5VWG9 929 aa15.2■□□□□ 0.02
CCNA1-201ENST00000255465 SIRT1Q96EB6 747 aa15.2■□□□□ 0.02
CCNA1-201ENST00000255465 ISY1Q9ULR0 285 aaKnown RBP15.2■□□□□ 0.02
CCNA1-201ENST00000255465 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
CCNA1-201ENST00000255465 DCCP43146 1447 aa15.19■□□□□ 0.02
CCNA1-201ENST00000255465 ATF3P18847 181 aa15.19■□□□□ 0.02
CCNA1-201ENST00000255465 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
CCNA1-201ENST00000255465 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
CCNA1-201ENST00000255465 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
CCNA1-201ENST00000255465 FTSJ3Q8IY81 847 aaKnown RBP15.18■□□□□ 0.02
CCNA1-201ENST00000255465 TEX2Q8IWB9 1127 aa15.18■□□□□ 0.02
CCNA1-201ENST00000255465 DISP3Q9P2K9 1392 aa15.17■□□□□ 0.02
CCNA1-201ENST00000255465 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
CCNA1-201ENST00000255465 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
CCNA1-201ENST00000255465 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
CCNA1-201ENST00000255465 ROBO1Q9Y6N7 1651 aa15.17■□□□□ 0.02
CCNA1-201ENST00000255465 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
CCNA1-201ENST00000255465 KIF20AO95235 890 aa15.16■□□□□ 0.02
CCNA1-201ENST00000255465 PAXIP1Q6ZW49 1069 aaPredicted RBP15.16■□□□□ 0.02
CCNA1-201ENST00000255465 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
CCNA1-201ENST00000255465 DMTNQ08495 405 aa15.15■□□□□ 0.02
CCNA1-201ENST00000255465 POGKQ9P215 609 aa15.15■□□□□ 0.02
CCNA1-201ENST00000255465 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
CCNA1-201ENST00000255465 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCNA1-201ENST00000255465 MST1RQ04912 1400 aa15.14■□□□□ 0.01
CCNA1-201ENST00000255465 FSD2A1L4K1 749 aa15.14■□□□□ 0.01
CCNA1-201ENST00000255465 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
CCNA1-201ENST00000255465 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
CCNA1-201ENST00000255465 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
CCNA1-201ENST00000255465 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
CCNA1-201ENST00000255465 RGPD8O14715 1765 aaPredicted RBP15.12■□□□□ 0.01
CCNA1-201ENST00000255465 RALGAPBQ86X10 1494 aa15.12■□□□□ 0.01
CCNA1-201ENST00000255465 ESPNB1AK53 854 aa15.12■□□□□ 0.01
CCNA1-201ENST00000255465 ADGRB2O60241 1585 aa15.11■□□□□ 0.01
CCNA1-201ENST00000255465 HOMEZQ8IX15 550 aa15.1■□□□□ 0.01
CCNA1-201ENST00000255465 ANP32BQ92688 251 aaKnown RBP15.1■□□□□ 0.01
CCNA1-201ENST00000255465 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
CCNA1-201ENST00000255465 GPRASP1Q5JY77 1395 aa15.1■□□□□ 0.01
CCNA1-201ENST00000255465 GOLGA6L3A6NEY3 463 aa15.1■□□□□ 0.01
CCNA1-201ENST00000255465 HSPA1LP34931 641 aa15.1■□□□□ 0.01
CCNA1-201ENST00000255465 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCNA1-201ENST00000255465 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
CCNA1-201ENST00000255465 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
CCNA1-201ENST00000255465 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
CCNA1-201ENST00000255465 BRINP3Q76B58 766 aa15.08■□□□□ 0.01
CCNA1-201ENST00000255465 HIRIP3Q9BW71 556 aaPredicted RBP15.08■□□□□ 0.01
CCNA1-201ENST00000255465 PHLPP1O60346 1717 aa15.08■□□□□ 0
CCNA1-201ENST00000255465 MRE11P49959 708 aa15.08■□□□□ 0
CCNA1-201ENST00000255465 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
CCNA1-201ENST00000255465 NUTM2FA1L443 756 aa15.07■□□□□ 0
CCNA1-201ENST00000255465 LETM1O95202 739 aaPredicted RBP15.06■□□□□ 0
CCNA1-201ENST00000255465 TMEM51Q9NW97 253 aa15.06■□□□□ 0
CCNA1-201ENST00000255465 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
CCNA1-201ENST00000255465 XRCC6P12956 609 aaKnown RBP eCLIP15.06■□□□□ 0
CCNA1-201ENST00000255465 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.06■□□□□ 0
CCNA1-201ENST00000255465 ORAI2Q96SN7 254 aa15.06■□□□□ 0
CCNA1-201ENST00000255465 USP32Q8NFA0 1604 aa15.05■□□□□ -0
CCNA1-201ENST00000255465 AHDC1Q5TGY3 1603 aaPredicted RBP15.05■□□□□ -0
CCNA1-201ENST00000255465 WASLO00401 505 aaPredicted RBP15.04■□□□□ -0
CCNA1-201ENST00000255465 PPP4R3BQ5MIZ7 849 aa15.04■□□□□ -0
CCNA1-201ENST00000255465 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
CCNA1-201ENST00000255465 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
CCNA1-201ENST00000255465 EIF3AQ14152 1382 aaKnown RBP15.03■□□□□ -0
CCNA1-201ENST00000255465 COL16A1Q07092 1604 aaPredicted RBP15.03■□□□□ -0
CCNA1-201ENST00000255465 OFD1O75665 1012 aa15.02■□□□□ -0
CCNA1-201ENST00000255465 TULP4Q9NRJ4 1543 aa15.02■□□□□ -0
CCNA1-201ENST00000255465 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
CCNA1-201ENST00000255465 ANKARQ7Z5J8 1434 aa15.02□□□□□ -0.01
CCNA1-201ENST00000255465 KIAA1211Q6ZU35 1233 aa15.01□□□□□ -0.01
CCNA1-201ENST00000255465 ITSN1Q15811 1721 aa15.01□□□□□ -0.01
CCNA1-201ENST00000255465 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
CCNA1-201ENST00000255465 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
CCNA1-201ENST00000255465 PRR36Q9H6K5 1346 aa15□□□□□ -0.01
CCNA1-201ENST00000255465 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
CCNA1-201ENST00000255465 SLC20A2Q08357 652 aa14.99□□□□□ -0.01
CCNA1-201ENST00000255465 ZFP91Q96JP5 570 aaPredicted RBP14.99□□□□□ -0.01
CCNA1-201ENST00000255465 ATP7BP35670 1465 aa14.98□□□□□ -0.01
CCNA1-201ENST00000255465 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 FOXO3O43524 673 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
CCNA1-201ENST00000255465 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 TOPAZ1Q8N9V7 1692 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 RIPK4P57078 832 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
CCNA1-201ENST00000255465 NPHP3Q7Z494 1330 aa14.96□□□□□ -0.01
CCNA1-201ENST00000255465 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
CCNA1-201ENST00000255465 USP47Q96K76 1375 aa14.96□□□□□ -0.02
CCNA1-201ENST00000255465 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.02
CCNA1-201ENST00000255465 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
CCNA1-201ENST00000255465 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms