RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 CDC45O75419 566 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
DCLK1-201ENST00000255448 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 KIF7Q2M1P5 1343 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 TTLL5Q6EMB2 1281 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
DCLK1-201ENST00000255448 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
DCLK1-201ENST00000255448 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 WASHC2AQ641Q2 1341 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 NAT10Q9H0A0 1025 aaKnown RBP13.09□□□□□ -0.31
DCLK1-201ENST00000255448 FIBPO43427 364 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
DCLK1-201ENST00000255448 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
DCLK1-201ENST00000255448 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 SMC2O95347 1197 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
DCLK1-201ENST00000255448 PCMTD1Q96MG8 357 aaPredicted RBP13.09□□□□□ -0.31
DCLK1-201ENST00000255448 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
DCLK1-201ENST00000255448 TNNT1P13805 278 aa13.08□□□□□ -0.32
DCLK1-201ENST00000255448 CENPHQ9H3R5 247 aa13.08□□□□□ -0.32
DCLK1-201ENST00000255448 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
DCLK1-201ENST00000255448 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
DCLK1-201ENST00000255448 HECW1Q76N89 1606 aa13.08□□□□□ -0.32
DCLK1-201ENST00000255448 SYCE3A1L190 88 aa13.08□□□□□ -0.32
DCLK1-201ENST00000255448 NOL10Q9BSC4 688 aaKnown RBP13.08□□□□□ -0.32
DCLK1-201ENST00000255448 AAMPQ13685 434 aa13.08□□□□□ -0.32
DCLK1-201ENST00000255448 NEK4P51957 841 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 CAGE1Q8TC20 777 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
DCLK1-201ENST00000255448 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
DCLK1-201ENST00000255448 HSP90AB4PQ58FF6 505 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 CCP110O43303 1012 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 EIF3JO75822 258 aaKnown RBP13.07□□□□□ -0.32
DCLK1-201ENST00000255448 RABEP1Q15276 862 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 XRCC6P12956 609 aaKnown RBP eCLIP13.07□□□□□ -0.32
DCLK1-201ENST00000255448 NLRP6P59044 892 aa13.07□□□□□ -0.32
DCLK1-201ENST00000255448 CCDC192P0DO97 292 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 GTF2A1P52655 376 aaPredicted RBP13.06□□□□□ -0.32
DCLK1-201ENST00000255448 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 SCAPERQ9BY12 1400 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 POLR3GO15318 223 aaPredicted RBP13.06□□□□□ -0.32
DCLK1-201ENST00000255448 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
DCLK1-201ENST00000255448 PROSER2Q86WR7 435 aaPredicted RBP13.06□□□□□ -0.32
DCLK1-201ENST00000255448 ANKRD20A12PQ8NF67 263 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
DCLK1-201ENST00000255448 PANK2Q9BZ23 570 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 FOSBP53539 338 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
DCLK1-201ENST00000255448 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
DCLK1-201ENST00000255448 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
DCLK1-201ENST00000255448 UBXN4Q92575 508 aa13.05□□□□□ -0.32
DCLK1-201ENST00000255448 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
DCLK1-201ENST00000255448 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
DCLK1-201ENST00000255448 CWC22Q9HCG8 908 aaKnown RBP13.05□□□□□ -0.32
DCLK1-201ENST00000255448 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
DCLK1-201ENST00000255448 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
DCLK1-201ENST00000255448 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
DCLK1-201ENST00000255448 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
DCLK1-201ENST00000255448 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
DCLK1-201ENST00000255448 MARCH6O60337 910 aa13.04□□□□□ -0.32
DCLK1-201ENST00000255448 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
DCLK1-201ENST00000255448 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
DCLK1-201ENST00000255448 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
DCLK1-201ENST00000255448 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
DCLK1-201ENST00000255448 ERLIN1O75477 346 aa13.04□□□□□ -0.32
DCLK1-201ENST00000255448 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
DCLK1-201ENST00000255448 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.04□□□□□ -0.32
DCLK1-201ENST00000255448 IGSF3O75054 1194 aa13.03□□□□□ -0.32
DCLK1-201ENST00000255448 NAP1L1P55209 391 aaKnown RBP13.03□□□□□ -0.32
DCLK1-201ENST00000255448 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
DCLK1-201ENST00000255448 HMOX1P09601 288 aa13.02□□□□□ -0.32
DCLK1-201ENST00000255448 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.32
DCLK1-201ENST00000255448 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
DCLK1-201ENST00000255448 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
DCLK1-201ENST00000255448 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
DCLK1-201ENST00000255448 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
DCLK1-201ENST00000255448 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
DCLK1-201ENST00000255448 ANKLE2Q86XL3 938 aa13.01□□□□□ -0.33
DCLK1-201ENST00000255448 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
DCLK1-201ENST00000255448 VPS37DQ86XT2 251 aa13.01□□□□□ -0.33
DCLK1-201ENST00000255448 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
DCLK1-201ENST00000255448 KINO60870 393 aaKnown RBP13.01□□□□□ -0.33
DCLK1-201ENST00000255448 MCM5P33992 734 aa13.01□□□□□ -0.33
DCLK1-201ENST00000255448 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
DCLK1-201ENST00000255448 NECTIN2Q92692 538 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms