RNA–Protein interactions for RNA: ENST00000246657.2

CCR7-201, Transcript of C-C motif chemokine receptor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR7, Length 2,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-201ENST00000246657 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.31
CCR7-201ENST00000246657 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.31
CCR7-201ENST00000246657 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
CCR7-201ENST00000246657 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
CCR7-201ENST00000246657 UNC13BO14795 1591 aa17.01■□□□□ 0.31
CCR7-201ENST00000246657 SYNMO15061 1565 aa17■□□□□ 0.31
CCR7-201ENST00000246657 APBB1O00213 710 aa17■□□□□ 0.31
CCR7-201ENST00000246657 SPTY2D1Q68D10 685 aaPredicted RBP16.99■□□□□ 0.31
CCR7-201ENST00000246657 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
CCR7-201ENST00000246657 TET3O43151 1660 aa16.99■□□□□ 0.31
CCR7-201ENST00000246657 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
CCR7-201ENST00000246657 TTC36A6NLP5 189 aa16.98■□□□□ 0.31
CCR7-201ENST00000246657 BRD1O95696 1058 aa16.98■□□□□ 0.31
CCR7-201ENST00000246657 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
CCR7-201ENST00000246657 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
CCR7-201ENST00000246657 NOS1P29475 1434 aa16.97■□□□□ 0.31
CCR7-201ENST00000246657 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
CCR7-201ENST00000246657 ADGRB3O60242 1522 aa16.96■□□□□ 0.31
CCR7-201ENST00000246657 EID1Q9Y6B2 187 aa16.95■□□□□ 0.3
CCR7-201ENST00000246657 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
CCR7-201ENST00000246657 CEP120Q8N960 986 aa16.95■□□□□ 0.3
CCR7-201ENST00000246657 RALGAPBQ86X10 1494 aa16.94■□□□□ 0.3
CCR7-201ENST00000246657 IQGAP3Q86VI3 1631 aa16.94■□□□□ 0.3
CCR7-201ENST00000246657 TMEM2Q9UHN6 1383 aa16.94■□□□□ 0.3
CCR7-201ENST00000246657 LTKP29376 864 aa16.94■□□□□ 0.3
CCR7-201ENST00000246657 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
CCR7-201ENST00000246657 IDI1Q13907 227 aa16.92■□□□□ 0.3
CCR7-201ENST00000246657 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
CCR7-201ENST00000246657 TOM1O60784 492 aa16.92■□□□□ 0.3
CCR7-201ENST00000246657 RINLQ6ZS11 566 aa16.92■□□□□ 0.3
CCR7-201ENST00000246657 EGFL6Q8IUX8 553 aa16.92■□□□□ 0.3
CCR7-201ENST00000246657 USP47Q96K76 1375 aa16.92■□□□□ 0.3
CCR7-201ENST00000246657 HSP90AA1P07900 732 aaKnown RBP16.91■□□□□ 0.3
CCR7-201ENST00000246657 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
CCR7-201ENST00000246657 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
CCR7-201ENST00000246657 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
CCR7-201ENST00000246657 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
CCR7-201ENST00000246657 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
CCR7-201ENST00000246657 E9PCH4 1651 aa16.9■□□□□ 0.3
CCR7-201ENST00000246657 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.3
CCR7-201ENST00000246657 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.3
CCR7-201ENST00000246657 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
CCR7-201ENST00000246657 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
CCR7-201ENST00000246657 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
CCR7-201ENST00000246657 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCR7-201ENST00000246657 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
CCR7-201ENST00000246657 ALKQ9UM73 1620 aa16.87■□□□□ 0.29
CCR7-201ENST00000246657 FAM43AQ8N2R8 423 aa16.87■□□□□ 0.29
CCR7-201ENST00000246657 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
CCR7-201ENST00000246657 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
CCR7-201ENST00000246657 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
CCR7-201ENST00000246657 XIRP1Q702N8 1843 aaKnown RBP16.85■□□□□ 0.29
CCR7-201ENST00000246657 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
CCR7-201ENST00000246657 SEMA3FQ13275 785 aa16.85■□□□□ 0.29
CCR7-201ENST00000246657 CASC1Q6TDU7 716 aa16.85■□□□□ 0.29
CCR7-201ENST00000246657 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
CCR7-201ENST00000246657 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
CCR7-201ENST00000246657 ZFYVE9O95405 1425 aa16.82■□□□□ 0.28
CCR7-201ENST00000246657 HSPA1LP34931 641 aa16.82■□□□□ 0.28
CCR7-201ENST00000246657 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
CCR7-201ENST00000246657 RIMS2Q9UQ26 1411 aa16.81■□□□□ 0.28
CCR7-201ENST00000246657 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCR7-201ENST00000246657 CCDC96Q2M329 555 aa16.81■□□□□ 0.28
CCR7-201ENST00000246657 NWD1Q149M9 1564 aa16.8■□□□□ 0.28
CCR7-201ENST00000246657 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
CCR7-201ENST00000246657 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
CCR7-201ENST00000246657 CCDC184Q52MB2 194 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 SLC26A8Q96RN1 970 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 LAMC1P11047 1609 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 PLEKHG1Q9ULL1 1385 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
CCR7-201ENST00000246657 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
CCR7-201ENST00000246657 KCNA6P17658 529 aa16.78■□□□□ 0.28
CCR7-201ENST00000246657 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
CCR7-201ENST00000246657 IRF6O14896 467 aa16.78■□□□□ 0.28
CCR7-201ENST00000246657 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
CCR7-201ENST00000246657 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
CCR7-201ENST00000246657 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
CCR7-201ENST00000246657 NME8Q8N427 588 aa16.77■□□□□ 0.28
CCR7-201ENST00000246657 MPNDQ8N594 471 aa16.77■□□□□ 0.28
CCR7-201ENST00000246657 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
CCR7-201ENST00000246657 CHD2O14647 1828 aaKnown RBP16.76■□□□□ 0.27
CCR7-201ENST00000246657 TMEM94Q12767 1356 aa16.76■□□□□ 0.27
CCR7-201ENST00000246657 MED1Q15648 1581 aaPredicted RBP16.75■□□□□ 0.27
CCR7-201ENST00000246657 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
CCR7-201ENST00000246657 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
CCR7-201ENST00000246657 DIP2AQ14689 1571 aa16.75■□□□□ 0.27
CCR7-201ENST00000246657 ILDR2Q71H61 639 aa16.74■□□□□ 0.27
CCR7-201ENST00000246657 OTUD6BQ8N6M0 293 aa16.74■□□□□ 0.27
CCR7-201ENST00000246657 TCERG1O14776 1098 aaKnown RBP16.74■□□□□ 0.27
CCR7-201ENST00000246657 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
CCR7-201ENST00000246657 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
CCR7-201ENST00000246657 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
CCR7-201ENST00000246657 ARMCX6Q7L4S7 300 aa16.72■□□□□ 0.27
CCR7-201ENST00000246657 APBB1IPQ7Z5R6 666 aaPredicted RBP16.72■□□□□ 0.27
CCR7-201ENST00000246657 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
CCR7-201ENST00000246657 GPRASP1Q5JY77 1395 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms