RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 ATP7BP35670 1465 aa12.89□□□□□ -0.35
TGFB3-201ENST00000238682 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
TGFB3-201ENST00000238682 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
TGFB3-201ENST00000238682 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
TGFB3-201ENST00000238682 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
TGFB3-201ENST00000238682 USP32Q8NFA0 1604 aa12.87□□□□□ -0.35
TGFB3-201ENST00000238682 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
TGFB3-201ENST00000238682 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
TGFB3-201ENST00000238682 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
TGFB3-201ENST00000238682 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
TGFB3-201ENST00000238682 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
TGFB3-201ENST00000238682 ORAI2Q96SN7 254 aa12.85□□□□□ -0.35
TGFB3-201ENST00000238682 POGKQ9P215 609 aa12.85□□□□□ -0.35
TGFB3-201ENST00000238682 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
TGFB3-201ENST00000238682 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
TGFB3-201ENST00000238682 SLIT2O94813 1529 aa12.84□□□□□ -0.35
TGFB3-201ENST00000238682 ARID3AQ99856 593 aa12.84□□□□□ -0.35
TGFB3-201ENST00000238682 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
TGFB3-201ENST00000238682 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
TGFB3-201ENST00000238682 STK26Q9P289 416 aa12.84□□□□□ -0.35
TGFB3-201ENST00000238682 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
TGFB3-201ENST00000238682 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.35
TGFB3-201ENST00000238682 PRAM1Q96QH2 718 aa12.83□□□□□ -0.36
TGFB3-201ENST00000238682 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
TGFB3-201ENST00000238682 RGS12O14924 1447 aa12.83□□□□□ -0.36
TGFB3-201ENST00000238682 TMF1P82094 1093 aa12.83□□□□□ -0.36
TGFB3-201ENST00000238682 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
TGFB3-201ENST00000238682 NUTM2BA6NNL0 878 aaPredicted RBP12.82□□□□□ -0.36
TGFB3-201ENST00000238682 NUTM2EB1AL46 878 aaPredicted RBP12.82□□□□□ -0.36
TGFB3-201ENST00000238682 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
TGFB3-201ENST00000238682 NUTM2AQ8IVF1 878 aaPredicted RBP12.82□□□□□ -0.36
TGFB3-201ENST00000238682 ALS2Q96Q42 1657 aa12.82□□□□□ -0.36
TGFB3-201ENST00000238682 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
TGFB3-201ENST00000238682 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
TGFB3-201ENST00000238682 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
TGFB3-201ENST00000238682 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
TGFB3-201ENST00000238682 TMEM132EQ6IEE7 984 aa12.81□□□□□ -0.36
TGFB3-201ENST00000238682 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
TGFB3-201ENST00000238682 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
TGFB3-201ENST00000238682 USP21Q9UK80 565 aa12.81□□□□□ -0.36
TGFB3-201ENST00000238682 C8orf37Q96NL8 207 aa12.8□□□□□ -0.36
TGFB3-201ENST00000238682 TESK2Q96S53 571 aa12.8□□□□□ -0.36
TGFB3-201ENST00000238682 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
TGFB3-201ENST00000238682 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
TGFB3-201ENST00000238682 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
TGFB3-201ENST00000238682 PLCH1Q4KWH8 1693 aa12.78□□□□□ -0.36
TGFB3-201ENST00000238682 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
TGFB3-201ENST00000238682 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
TGFB3-201ENST00000238682 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
TGFB3-201ENST00000238682 MIER1Q8N108 512 aa12.77□□□□□ -0.37
TGFB3-201ENST00000238682 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
TGFB3-201ENST00000238682 FOXO3O43524 673 aa12.77□□□□□ -0.37
TGFB3-201ENST00000238682 VPS72Q15906 364 aa12.77□□□□□ -0.37
TGFB3-201ENST00000238682 EVC2Q86UK5 1308 aa12.76□□□□□ -0.37
TGFB3-201ENST00000238682 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
TGFB3-201ENST00000238682 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
TGFB3-201ENST00000238682 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
TGFB3-201ENST00000238682 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
TGFB3-201ENST00000238682 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
TGFB3-201ENST00000238682 ABCC6O95255 1503 aa12.75□□□□□ -0.37
TGFB3-201ENST00000238682 KTN1Q86UP2 1357 aaKnown RBP12.75□□□□□ -0.37
TGFB3-201ENST00000238682 KIF7Q2M1P5 1343 aa12.74□□□□□ -0.37
TGFB3-201ENST00000238682 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
TGFB3-201ENST00000238682 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
TGFB3-201ENST00000238682 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
TGFB3-201ENST00000238682 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
TGFB3-201ENST00000238682 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
TGFB3-201ENST00000238682 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
TGFB3-201ENST00000238682 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
TGFB3-201ENST00000238682 GLI3P10071 1580 aa12.72□□□□□ -0.37
TGFB3-201ENST00000238682 MYOM1P52179 1685 aa12.72□□□□□ -0.37
TGFB3-201ENST00000238682 CPDO75976 1380 aa12.72□□□□□ -0.37
TGFB3-201ENST00000238682 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
TGFB3-201ENST00000238682 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
TGFB3-201ENST00000238682 RGPD8O14715 1765 aaPredicted RBP12.71□□□□□ -0.37
TGFB3-201ENST00000238682 NPC1L1Q9UHC9 1359 aa12.71□□□□□ -0.38
TGFB3-201ENST00000238682 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
TGFB3-201ENST00000238682 BLMP54132 1417 aaPredicted RBP12.7□□□□□ -0.38
TGFB3-201ENST00000238682 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
TGFB3-201ENST00000238682 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
TGFB3-201ENST00000238682 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
TGFB3-201ENST00000238682 USP19O94966 1318 aa12.69□□□□□ -0.38
TGFB3-201ENST00000238682 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
TGFB3-201ENST00000238682 THSD7AQ9UPZ6 1657 aa12.68□□□□□ -0.38
TGFB3-201ENST00000238682 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
TGFB3-201ENST00000238682 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
TGFB3-201ENST00000238682 ERICH6BQ5W0A0 696 aa12.68□□□□□ -0.38
TGFB3-201ENST00000238682 SLIT3O75094 1523 aa12.68□□□□□ -0.38
TGFB3-201ENST00000238682 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
TGFB3-201ENST00000238682 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
TGFB3-201ENST00000238682 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
TGFB3-201ENST00000238682 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
TGFB3-201ENST00000238682 NSD2O96028 1365 aa12.66□□□□□ -0.38
TGFB3-201ENST00000238682 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
TGFB3-201ENST00000238682 YTHDC1Q96MU7 727 aaKnown RBP12.65□□□□□ -0.38
TGFB3-201ENST00000238682 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
TGFB3-201ENST00000238682 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
TGFB3-201ENST00000238682 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
TGFB3-201ENST00000238682 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
TGFB3-201ENST00000238682 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms