RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
PRDM4-201ENST00000228437 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
PRDM4-201ENST00000228437 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
PRDM4-201ENST00000228437 UPF3BQ9BZI7 483 aaKnown RBP17.73■□□□□ 0.43
PRDM4-201ENST00000228437 FIBPO43427 364 aa17.73■□□□□ 0.43
PRDM4-201ENST00000228437 REC8O95072 547 aa17.73■□□□□ 0.43
PRDM4-201ENST00000228437 TRMT2AQ8IZ69 625 aaKnown RBP17.73■□□□□ 0.43
PRDM4-201ENST00000228437 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
PRDM4-201ENST00000228437 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
PRDM4-201ENST00000228437 NPHP1O15259 732 aa17.72■□□□□ 0.43
PRDM4-201ENST00000228437 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
PRDM4-201ENST00000228437 MTERF4Q7Z6M4 381 aaKnown RBP17.71■□□□□ 0.43
PRDM4-201ENST00000228437 ZKSCAN5Q9Y2L8 839 aa17.71■□□□□ 0.43
PRDM4-201ENST00000228437 NUCB1Q02818 461 aa17.71■□□□□ 0.43
PRDM4-201ENST00000228437 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.43
PRDM4-201ENST00000228437 PHF14O94880 888 aa17.71■□□□□ 0.43
PRDM4-201ENST00000228437 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
PRDM4-201ENST00000228437 TSHZ3Q63HK5 1081 aa17.71■□□□□ 0.43
PRDM4-201ENST00000228437 MAGI2Q86UL8 1455 aa17.7■□□□□ 0.42
PRDM4-201ENST00000228437 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
PRDM4-201ENST00000228437 SNX21Q969T3 373 aa17.7■□□□□ 0.42
PRDM4-201ENST00000228437 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
PRDM4-201ENST00000228437 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
PRDM4-201ENST00000228437 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
PRDM4-201ENST00000228437 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
PRDM4-201ENST00000228437 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
PRDM4-201ENST00000228437 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
PRDM4-201ENST00000228437 HDGFL2Q7Z4V5 671 aaPredicted RBP17.68■□□□□ 0.42
PRDM4-201ENST00000228437 MBD3O95983 291 aa17.68■□□□□ 0.42
PRDM4-201ENST00000228437 KIF3AQ9Y496 699 aa17.67■□□□□ 0.42
PRDM4-201ENST00000228437 VPS37CA5D8V6 355 aaPredicted RBP17.67■□□□□ 0.42
PRDM4-201ENST00000228437 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
PRDM4-201ENST00000228437 DYNC1I1O14576 645 aa17.67■□□□□ 0.42
PRDM4-201ENST00000228437 TWISTNBQ3B726 338 aaPredicted RBP17.66■□□□□ 0.42
PRDM4-201ENST00000228437 MBD5Q9P267 1494 aa17.66■□□□□ 0.42
PRDM4-201ENST00000228437 RBM25P49756 843 aaKnown RBP17.66■□□□□ 0.42
PRDM4-201ENST00000228437 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
PRDM4-201ENST00000228437 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
PRDM4-201ENST00000228437 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
PRDM4-201ENST00000228437 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRDM4-201ENST00000228437 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
PRDM4-201ENST00000228437 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
PRDM4-201ENST00000228437 PDCL2Q8N4E4 241 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 ZBTB40Q9NUA8 1239 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 NOL7Q9UMY1 257 aaKnown RBP17.65■□□□□ 0.42
PRDM4-201ENST00000228437 ASXL1Q8IXJ9 1541 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 EVC2Q86UK5 1308 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 A2MP01023 1474 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 PTPRGP23470 1445 aa17.65■□□□□ 0.42
PRDM4-201ENST00000228437 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.42
PRDM4-201ENST00000228437 CGNQ9P2M7 1197 aaKnown RBP17.64■□□□□ 0.42
PRDM4-201ENST00000228437 OTUD7AQ8TE49 926 aaPredicted RBP17.64■□□□□ 0.41
PRDM4-201ENST00000228437 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
PRDM4-201ENST00000228437 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRDM4-201ENST00000228437 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
PRDM4-201ENST00000228437 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
PRDM4-201ENST00000228437 LRSAM1Q6UWE0 723 aa17.63■□□□□ 0.41
PRDM4-201ENST00000228437 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
PRDM4-201ENST00000228437 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
PRDM4-201ENST00000228437 TMEM63CQ9P1W3 806 aa17.63■□□□□ 0.41
PRDM4-201ENST00000228437 HMMRO75330 724 aa17.63■□□□□ 0.41
PRDM4-201ENST00000228437 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
PRDM4-201ENST00000228437 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
PRDM4-201ENST00000228437 TRERF1Q96PN7 1200 aa17.62■□□□□ 0.41
PRDM4-201ENST00000228437 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
PRDM4-201ENST00000228437 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
PRDM4-201ENST00000228437 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
PRDM4-201ENST00000228437 ADCY5O95622 1261 aa17.61■□□□□ 0.41
PRDM4-201ENST00000228437 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
PRDM4-201ENST00000228437 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
PRDM4-201ENST00000228437 PIK3C2GO75747 1445 aa17.6■□□□□ 0.41
PRDM4-201ENST00000228437 ERICH4A6NGS2 130 aa17.6■□□□□ 0.41
PRDM4-201ENST00000228437 ERC2O15083 957 aa17.6■□□□□ 0.41
PRDM4-201ENST00000228437 ARHGEF12Q9NZN5 1544 aa17.6■□□□□ 0.41
PRDM4-201ENST00000228437 NOLC1Q14978 699 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRDM4-201ENST00000228437 DIAPH3Q9NSV4 1193 aa17.59■□□□□ 0.41
PRDM4-201ENST00000228437 BBXQ8WY36 941 aaPredicted RBP17.59■□□□□ 0.41
PRDM4-201ENST00000228437 WDR62O43379 1518 aa17.59■□□□□ 0.41
PRDM4-201ENST00000228437 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
PRDM4-201ENST00000228437 FGD1P98174 961 aa17.59■□□□□ 0.41
PRDM4-201ENST00000228437 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
PRDM4-201ENST00000228437 GNAI1P63096 354 aa17.58■□□□□ 0.41
PRDM4-201ENST00000228437 NSFL1CQ9UNZ2 370 aaKnown RBP17.58■□□□□ 0.41
PRDM4-201ENST00000228437 ZNF428Q96B54 188 aa17.58■□□□□ 0.41
PRDM4-201ENST00000228437 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.4
PRDM4-201ENST00000228437 SDSP20132 328 aa17.58■□□□□ 0.4
PRDM4-201ENST00000228437 SMC3Q9UQE7 1217 aa17.58■□□□□ 0.4
PRDM4-201ENST00000228437 FOSBP53539 338 aa17.58■□□□□ 0.4
PRDM4-201ENST00000228437 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
PRDM4-201ENST00000228437 CAMK4Q16566 473 aa17.57■□□□□ 0.4
PRDM4-201ENST00000228437 GPT2Q8TD30 523 aa17.57■□□□□ 0.4
PRDM4-201ENST00000228437 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
PRDM4-201ENST00000228437 INSRP06213 1382 aa17.57■□□□□ 0.4
PRDM4-201ENST00000228437 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
PRDM4-201ENST00000228437 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
PRDM4-201ENST00000228437 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
PRDM4-201ENST00000228437 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
PRDM4-201ENST00000228437 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
PRDM4-201ENST00000228437 C16orf45Q96MC5 204 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms