RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 KIF1CO43896 1103 aaKnown RBP8.13□□□□□ -1.11
RBM28-201ENST00000223073 B4GALNT4Q76KP1 1039 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 FMNL2Q96PY5 1086 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 WDR33Q9C0J8 1336 aaKnown RBP8.13□□□□□ -1.11
RBM28-201ENST00000223073 CCDC102AQ96A19 550 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 WRNQ14191 1432 aaPredicted RBP eCLIP8.13□□□□□ -1.11
RBM28-201ENST00000223073 CDC45O75419 566 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 SMC2O95347 1197 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 POTEDQ86YR6 584 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 GBP6Q6ZN66 633 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 CENPHQ9H3R5 247 aa8.13□□□□□ -1.11
RBM28-201ENST00000223073 KIF3BO15066 747 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 HSPA4P34932 840 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 BICD2Q8TD16 824 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 TACO1Q9BSH4 297 aaKnown RBP8.12□□□□□ -1.11
RBM28-201ENST00000223073 CHIC2Q9UKJ5 165 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 SMC3Q9UQE7 1217 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 BRMS1Q9HCU9 246 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 HDAC1Q13547 482 aaPredicted RBP8.12□□□□□ -1.11
RBM28-201ENST00000223073 RRP7BPQ9NSQ0 103 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 CEP164Q9UPV0 1460 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
RBM28-201ENST00000223073 CCDC196A0A1B0GTZ2 297 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 POGKQ9P215 609 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 NOL8Q76FK4 1167 aaKnown RBP8.12□□□□□ -1.11
RBM28-201ENST00000223073 PLEKHD1A6NEE1 506 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 ANKRD18AQ8IVF6 992 aa8.12□□□□□ -1.11
RBM28-201ENST00000223073 KINO60870 393 aaKnown RBP8.11□□□□□ -1.11
RBM28-201ENST00000223073 ZNF853P0CG23 659 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 ARMCX6Q7L4S7 300 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 CHGAP10645 457 aaKnown RBP8.11□□□□□ -1.11
RBM28-201ENST00000223073 PSMA5P28066 241 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 SEPT6Q14141 434 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 ANKRD45Q5TZF3 282 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 LMAN1P49257 510 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 LRRFIP1Q32MZ4 808 aaKnown RBP8.11□□□□□ -1.11
RBM28-201ENST00000223073 MORC1Q86VD1 984 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 ANKS4BQ8N8V4 417 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 ARFGAP3Q9NP61 516 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 NPM1P06748 294 aaKnown RBP eCLIP8.11□□□□□ -1.11
RBM28-201ENST00000223073 CCDC183Q5T5S1 534 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 NBPF5PQ86XG9 351 aaPredicted RBP8.11□□□□□ -1.11
RBM28-201ENST00000223073 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 K7ELQ4 463 aaPredicted RBP8.11□□□□□ -1.11
RBM28-201ENST00000223073 TRDNQ13061 729 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
RBM28-201ENST00000223073 EBAG9O00559 213 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 CCDC47Q96A33 483 aaKnown RBP8.1□□□□□ -1.11
RBM28-201ENST00000223073 CLUAP1Q96AJ1 413 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 CCDC171Q6TFL3 1326 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 CTAGE5O15320 804 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 ZNF396Q96N95 335 aaPredicted RBP8.1□□□□□ -1.11
RBM28-201ENST00000223073 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
RBM28-201ENST00000223073 SDF4Q9BRK5 362 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 CCDC148Q8NFR7 591 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 ERC1Q8IUD2 1116 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 SMTNL1A8MU46 457 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 FILIP1LQ4L180 1135 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 ODF2Q5BJF6 829 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 ERCC3P19447 782 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 HSP90AB2PQ58FF8 381 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 SPECC1LQ69YQ0 1117 aa8.1□□□□□ -1.11
RBM28-201ENST00000223073 FHAD1B1AJZ9 1412 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 NEBLO76041 1014 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 CERS3Q8IU89 383 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 DRC1Q96MC2 740 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 CASQ1P31415 396 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 TUBB2AQ13885 445 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 TUBB2BQ9BVA1 445 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 DACH1Q9UI36 760 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 ZKSCAN5Q9Y2L8 839 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 SFPQP23246 707 aaKnown RBP eCLIP8.09□□□□□ -1.11
RBM28-201ENST00000223073 CPLX2Q6PUV4 134 aaKnown RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 CTCFLQ8NI51 663 aaPredicted RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 SPDYE4A6NLX3 237 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 CEP112Q8N8E3 955 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 ZNF397Q8NF99 534 aaPredicted RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
RBM28-201ENST00000223073 NUCKS1Q9H1E3 243 aaKnown RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 EIF5P55010 431 aaKnown RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 ZMAT2Q96NC0 199 aaKnown RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 BRD4O60885 1362 aaPredicted RBP8.09□□□□□ -1.11
RBM28-201ENST00000223073 NOLC1Q14978 699 aaKnown RBP eCLIP8.08□□□□□ -1.12
RBM28-201ENST00000223073 KLHL40Q2TBA0 621 aa8.08□□□□□ -1.12
RBM28-201ENST00000223073 CEP57L1Q8IYX8 460 aa8.08□□□□□ -1.12
RBM28-201ENST00000223073 RPUSD2Q8IZ73 545 aaKnown RBP8.08□□□□□ -1.12
RBM28-201ENST00000223073 MYRIPQ8NFW9 859 aa8.08□□□□□ -1.12
RBM28-201ENST00000223073 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
RBM28-201ENST00000223073 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
RBM28-201ENST00000223073 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
RBM28-201ENST00000223073 CFAP57Q96MR6 1250 aa8.08□□□□□ -1.12
RBM28-201ENST00000223073 IMMTQ16891 758 aaKnown RBP8.07□□□□□ -1.12
RBM28-201ENST00000223073 GORABQ5T7V8 394 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms