RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 USP6P35125 1406 aa20.31■□□□□ 0.84
STX1A-201ENST00000222812 ATF3P18847 181 aa20.31■□□□□ 0.84
STX1A-201ENST00000222812 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
STX1A-201ENST00000222812 NME9Q86XW9 330 aa20.3■□□□□ 0.84
STX1A-201ENST00000222812 MSH6P52701 1360 aa20.3■□□□□ 0.84
STX1A-201ENST00000222812 MST1RQ04912 1400 aa20.3■□□□□ 0.84
STX1A-201ENST00000222812 C1orf167Q5SNV9 1468 aa20.29■□□□□ 0.84
STX1A-201ENST00000222812 NSD2O96028 1365 aa20.28■□□□□ 0.84
STX1A-201ENST00000222812 NLRP13Q86W25 1043 aa20.28■□□□□ 0.84
STX1A-201ENST00000222812 DCCP43146 1447 aa20.28■□□□□ 0.84
STX1A-201ENST00000222812 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
STX1A-201ENST00000222812 SSH2Q76I76 1423 aa20.28■□□□□ 0.84
STX1A-201ENST00000222812 LTBP4Q8N2S1 1624 aa20.26■□□□□ 0.83
STX1A-201ENST00000222812 BRD4O60885 1362 aaPredicted RBP20.26■□□□□ 0.83
STX1A-201ENST00000222812 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
STX1A-201ENST00000222812 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
STX1A-201ENST00000222812 FBLN1P23142 703 aa20.24■□□□□ 0.83
STX1A-201ENST00000222812 FOXO3O43524 673 aa20.23■□□□□ 0.83
STX1A-201ENST00000222812 PIK3C2AO00443 1686 aa20.23■□□□□ 0.83
STX1A-201ENST00000222812 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
STX1A-201ENST00000222812 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
STX1A-201ENST00000222812 KIF1AQ12756 1690 aa20.22■□□□□ 0.83
STX1A-201ENST00000222812 PSME1Q06323 249 aa20.21■□□□□ 0.83
STX1A-201ENST00000222812 PNISRQ8TF01 805 aaKnown RBP20.21■□□□□ 0.83
STX1A-201ENST00000222812 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
STX1A-201ENST00000222812 PAK3O75914 559 aaPredicted RBP20.2■□□□□ 0.82
STX1A-201ENST00000222812 MARF1Q9Y4F3 1742 aaKnown RBP20.2■□□□□ 0.82
STX1A-201ENST00000222812 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
STX1A-201ENST00000222812 COG3Q96JB2 828 aa20.18■□□□□ 0.82
STX1A-201ENST00000222812 TTC21AQ8NDW8 1320 aa20.18■□□□□ 0.82
STX1A-201ENST00000222812 MTHFSP49914 203 aa20.18■□□□□ 0.82
STX1A-201ENST00000222812 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
STX1A-201ENST00000222812 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
STX1A-201ENST00000222812 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
STX1A-201ENST00000222812 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
STX1A-201ENST00000222812 BRINP3Q76B58 766 aa20.15■□□□□ 0.82
STX1A-201ENST00000222812 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
STX1A-201ENST00000222812 ABTB2Q8N961 1025 aa20.15■□□□□ 0.82
STX1A-201ENST00000222812 SOX12O15370 315 aa20.14■□□□□ 0.81
STX1A-201ENST00000222812 NLRP6P59044 892 aa20.14■□□□□ 0.81
STX1A-201ENST00000222812 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
STX1A-201ENST00000222812 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
STX1A-201ENST00000222812 POLKQ9UBT6 870 aa20.12■□□□□ 0.81
STX1A-201ENST00000222812 USP54Q70EL1 1684 aa20.12■□□□□ 0.81
STX1A-201ENST00000222812 RRS1Q15050 365 aaKnown RBP20.12■□□□□ 0.81
STX1A-201ENST00000222812 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
STX1A-201ENST00000222812 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
STX1A-201ENST00000222812 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
STX1A-201ENST00000222812 ALS2Q96Q42 1657 aa20.1■□□□□ 0.81
STX1A-201ENST00000222812 PLEKHG5O94827 1062 aa20.09■□□□□ 0.81
STX1A-201ENST00000222812 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
STX1A-201ENST00000222812 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.81
STX1A-201ENST00000222812 PXDNQ92626 1479 aa20.08■□□□□ 0.81
STX1A-201ENST00000222812 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
STX1A-201ENST00000222812 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.8
STX1A-201ENST00000222812 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
STX1A-201ENST00000222812 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
STX1A-201ENST00000222812 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
STX1A-201ENST00000222812 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
STX1A-201ENST00000222812 NHSL1Q5SYE7 1610 aa20.05■□□□□ 0.8
STX1A-201ENST00000222812 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.8
STX1A-201ENST00000222812 CFAP53Q96M91 514 aa20.05■□□□□ 0.8
STX1A-201ENST00000222812 SMG6Q86US8 1419 aaKnown RBP20.04■□□□□ 0.8
STX1A-201ENST00000222812 PNPLA6Q8IY17 1366 aa20.04■□□□□ 0.8
STX1A-201ENST00000222812 LTN1O94822 1766 aa20.04■□□□□ 0.8
STX1A-201ENST00000222812 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.8
STX1A-201ENST00000222812 SBNO1A3KN83 1393 aa20.02■□□□□ 0.79
STX1A-201ENST00000222812 CDK12Q9NYV4 1490 aaPredicted RBP20.01■□□□□ 0.79
STX1A-201ENST00000222812 SOS2Q07890 1332 aaPredicted RBP20.01■□□□□ 0.79
STX1A-201ENST00000222812 TNS3Q68CZ2 1445 aa20.01■□□□□ 0.79
STX1A-201ENST00000222812 MED1Q15648 1581 aaPredicted RBP20.01■□□□□ 0.79
STX1A-201ENST00000222812 NFAT5O94916 1531 aa20■□□□□ 0.79
STX1A-201ENST00000222812 SPATA31A3Q5VYP0 1347 aa20■□□□□ 0.79
STX1A-201ENST00000222812 INSRP06213 1382 aa19.99■□□□□ 0.79
STX1A-201ENST00000222812 BLMP54132 1417 aaPredicted RBP19.99■□□□□ 0.79
STX1A-201ENST00000222812 SLIT3O75094 1523 aa19.99■□□□□ 0.79
STX1A-201ENST00000222812 DIAPH1O60610 1272 aaKnown RBP19.99■□□□□ 0.79
STX1A-201ENST00000222812 CCDC146Q8IYE0 955 aa19.99■□□□□ 0.79
STX1A-201ENST00000222812 HSP90AB2PQ58FF8 381 aa19.98■□□□□ 0.79
STX1A-201ENST00000222812 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
STX1A-201ENST00000222812 CRYBG1Q9Y4K1 1723 aa19.98■□□□□ 0.79
STX1A-201ENST00000222812 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
STX1A-201ENST00000222812 USP19O94966 1318 aa19.97■□□□□ 0.79
STX1A-201ENST00000222812 GCP02774 474 aa19.97■□□□□ 0.79
STX1A-201ENST00000222812 PHRF1Q9P1Y6 1649 aaKnown RBP19.97■□□□□ 0.79
STX1A-201ENST00000222812 ZBTB7CA1YPR0 619 aa19.96■□□□□ 0.79
STX1A-201ENST00000222812 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
STX1A-201ENST00000222812 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
STX1A-201ENST00000222812 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
STX1A-201ENST00000222812 IL13P35225 146 aa19.95■□□□□ 0.78
STX1A-201ENST00000222812 AMPHP49418 695 aa19.95■□□□□ 0.78
STX1A-201ENST00000222812 PIP4K2BP78356 416 aa19.95■□□□□ 0.78
STX1A-201ENST00000222812 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
STX1A-201ENST00000222812 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
STX1A-201ENST00000222812 TOM1O60784 492 aa19.93■□□□□ 0.78
STX1A-201ENST00000222812 EIF4A2Q14240 407 aaKnown RBP19.93■□□□□ 0.78
STX1A-201ENST00000222812 RGPD5Q99666 1765 aa19.93■□□□□ 0.78
STX1A-201ENST00000222812 FLT4P35916 1363 aa19.93■□□□□ 0.78
STX1A-201ENST00000222812 UBAP1LF5GYI3 381 aa19.93■□□□□ 0.78
STX1A-201ENST00000222812 ARHGEF10O15013 1369 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms