RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PPFIBP1Q86W92 1011 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
USP31-201ENST00000219689 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
USP31-201ENST00000219689 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
USP31-201ENST00000219689 STK26Q9P289 416 aa13.11□□□□□ -0.31
USP31-201ENST00000219689 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
USP31-201ENST00000219689 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
USP31-201ENST00000219689 JAKMIP3Q5VZ66 844 aa13.11□□□□□ -0.31
USP31-201ENST00000219689 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
USP31-201ENST00000219689 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
USP31-201ENST00000219689 FILIP1LQ4L180 1135 aa13.1□□□□□ -0.31
USP31-201ENST00000219689 CPSF2Q9P2I0 782 aaKnown RBP13.1□□□□□ -0.31
USP31-201ENST00000219689 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
USP31-201ENST00000219689 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
USP31-201ENST00000219689 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
USP31-201ENST00000219689 ANKRD62A6NC57 917 aa13.1□□□□□ -0.31
USP31-201ENST00000219689 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
USP31-201ENST00000219689 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
USP31-201ENST00000219689 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
USP31-201ENST00000219689 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 MAP9Q49MG5 647 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 TCEAL9Q9UHQ7 104 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
USP31-201ENST00000219689 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
USP31-201ENST00000219689 ZNF830Q96NB3 372 aaPredicted RBP13.09□□□□□ -0.31
USP31-201ENST00000219689 CAMK4Q16566 473 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 DRC1Q96MC2 740 aa13.09□□□□□ -0.31
USP31-201ENST00000219689 NFXL1Q6ZNB6 911 aa13.08□□□□□ -0.31
USP31-201ENST00000219689 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.31
USP31-201ENST00000219689 MICALL1Q8N3F8 863 aa13.08□□□□□ -0.32
USP31-201ENST00000219689 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
USP31-201ENST00000219689 OFD1O75665 1012 aa13.08□□□□□ -0.32
USP31-201ENST00000219689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.322e-51■■■■■ 1229.7
USP31-201ENST00000219689 BCCIPQ9P287 314 aaKnown RBP eCLIP13.08□□□□□ -0.32
USP31-201ENST00000219689 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
USP31-201ENST00000219689 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
USP31-201ENST00000219689 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
USP31-201ENST00000219689 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
USP31-201ENST00000219689 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.32
USP31-201ENST00000219689 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.32
USP31-201ENST00000219689 SKAP1Q86WV1 359 aa13.08□□□□□ -0.32
USP31-201ENST00000219689 MCM5P33992 734 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 NUMA1Q14980 2115 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 MAGEC2Q9UBF1 373 aaPredicted RBP13.07□□□□□ -0.32
USP31-201ENST00000219689 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
USP31-201ENST00000219689 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
USP31-201ENST00000219689 LUZP1Q86V48 1076 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
USP31-201ENST00000219689 IVLP07476 585 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 ADCY5O95622 1261 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 ZBTB9Q96C00 473 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
USP31-201ENST00000219689 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
USP31-201ENST00000219689 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 ST20-MTHFSA0A0A6YYL1 179 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
USP31-201ENST00000219689 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 CCDC183Q5T5S1 534 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
USP31-201ENST00000219689 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP31-201ENST00000219689 MCM2P49736 904 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 NUP62CLQ9H1M0 184 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
USP31-201ENST00000219689 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
USP31-201ENST00000219689 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 CBFA2T2O43439 604 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 GBP3Q9H0R5 595 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
USP31-201ENST00000219689 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
USP31-201ENST00000219689 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
USP31-201ENST00000219689 EZRP15311 586 aaKnown RBP13.05□□□□□ -0.32
USP31-201ENST00000219689 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
USP31-201ENST00000219689 SCLT1Q96NL6 688 aa13.04□□□□□ -0.32
USP31-201ENST00000219689 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
USP31-201ENST00000219689 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
USP31-201ENST00000219689 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
USP31-201ENST00000219689 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
USP31-201ENST00000219689 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP31-201ENST00000219689 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
USP31-201ENST00000219689 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
USP31-201ENST00000219689 ATP2C2O75185 946 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 PDCP20941 246 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 KAT6AQ92794 2004 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 ME1P48163 572 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 C1orf115Q9H7X2 142 aa13.03□□□□□ -0.32
USP31-201ENST00000219689 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms