RNA–Protein interactions for RNA: ENST00000211921.11

LST1-201, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-201ENST00000211921 ATAD2Q6PL18 1390 aa16.3■□□□□ 0.2
LST1-201ENST00000211921 PHRF1Q9P1Y6 1649 aaKnown RBP16.3■□□□□ 0.2
LST1-201ENST00000211921 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
LST1-201ENST00000211921 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
LST1-201ENST00000211921 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
LST1-201ENST00000211921 CCDC61Q9Y6R9 512 aa16.29■□□□□ 0.2
LST1-201ENST00000211921 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
LST1-201ENST00000211921 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
LST1-201ENST00000211921 NRAPQ86VF7 1730 aa16.28■□□□□ 0.2
LST1-201ENST00000211921 GJD4Q96KN9 370 aaPredicted RBP16.28■□□□□ 0.2
LST1-201ENST00000211921 GLI3P10071 1580 aa16.28■□□□□ 0.2
LST1-201ENST00000211921 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.2
LST1-201ENST00000211921 ACEP12821 1306 aa16.27■□□□□ 0.2
LST1-201ENST00000211921 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
LST1-201ENST00000211921 EVC2Q86UK5 1308 aa16.25■□□□□ 0.19
LST1-201ENST00000211921 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
LST1-201ENST00000211921 A0A0G2JS52 829 aa16.23■□□□□ 0.19
LST1-201ENST00000211921 PLEKHG3A1L390 1219 aa16.23■□□□□ 0.19
LST1-201ENST00000211921 MYT1Q01538 1121 aa16.23■□□□□ 0.19
LST1-201ENST00000211921 VPS72Q15906 364 aa16.23■□□□□ 0.19
LST1-201ENST00000211921 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
LST1-201ENST00000211921 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
LST1-201ENST00000211921 FAM83GA6ND36 823 aa16.22■□□□□ 0.19
LST1-201ENST00000211921 BTG4Q9NY30 223 aa16.22■□□□□ 0.19
LST1-201ENST00000211921 EP400Q96L91 3159 aa16.22■□□□□ 0.19
LST1-201ENST00000211921 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.19
LST1-201ENST00000211921 NUTM2GQ5VZR2 741 aa16.21■□□□□ 0.19
LST1-201ENST00000211921 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
LST1-201ENST00000211921 AKAP12Q02952 1782 aa16.21■□□□□ 0.18
LST1-201ENST00000211921 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
LST1-201ENST00000211921 BRD4O60885 1362 aaPredicted RBP16.19■□□□□ 0.18
LST1-201ENST00000211921 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
LST1-201ENST00000211921 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
LST1-201ENST00000211921 USP6P35125 1406 aa16.18■□□□□ 0.18
LST1-201ENST00000211921 SEPT12Q8IYM1 358 aa16.17■□□□□ 0.18
LST1-201ENST00000211921 PIK3C2AO00443 1686 aa16.16■□□□□ 0.18
LST1-201ENST00000211921 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
LST1-201ENST00000211921 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
LST1-201ENST00000211921 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
LST1-201ENST00000211921 CHRNA2Q15822 529 aa16.15■□□□□ 0.18
LST1-201ENST00000211921 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
LST1-201ENST00000211921 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
LST1-201ENST00000211921 CCDC125Q86Z20 511 aa16.14■□□□□ 0.17
LST1-201ENST00000211921 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
LST1-201ENST00000211921 USP19O94966 1318 aa16.14■□□□□ 0.17
LST1-201ENST00000211921 LMO7Q8WWI1 1683 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 EVA1CP58658 441 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 NLRP6P59044 892 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
LST1-201ENST00000211921 KRT27Q7Z3Y8 459 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 SPATA31A5Q5VU36 1347 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 SPATA31A7Q8IWB4 1347 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 CPDO75976 1380 aa16.12■□□□□ 0.17
LST1-201ENST00000211921 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
LST1-201ENST00000211921 ZBTB7CA1YPR0 619 aa16.11■□□□□ 0.17
LST1-201ENST00000211921 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
LST1-201ENST00000211921 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
LST1-201ENST00000211921 SLIT3O75094 1523 aa16.1■□□□□ 0.17
LST1-201ENST00000211921 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
LST1-201ENST00000211921 GCP02774 474 aa16.1■□□□□ 0.17
LST1-201ENST00000211921 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
LST1-201ENST00000211921 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
LST1-201ENST00000211921 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.17
LST1-201ENST00000211921 TMC1Q8TDI8 760 aa16.08■□□□□ 0.16
LST1-201ENST00000211921 USP35Q9P2H5 1018 aa16.08■□□□□ 0.16
LST1-201ENST00000211921 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.16
LST1-201ENST00000211921 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
LST1-201ENST00000211921 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
LST1-201ENST00000211921 COL5A2P05997 1499 aaPredicted RBP16.06■□□□□ 0.16
LST1-201ENST00000211921 CPSF1Q10570 1443 aaKnown RBP16.06■□□□□ 0.16
LST1-201ENST00000211921 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
LST1-201ENST00000211921 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
LST1-201ENST00000211921 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
LST1-201ENST00000211921 KCNH5Q8NCM2 988 aa16.05■□□□□ 0.16
LST1-201ENST00000211921 SOX12O15370 315 aa16.04■□□□□ 0.16
LST1-201ENST00000211921 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
LST1-201ENST00000211921 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
LST1-201ENST00000211921 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
LST1-201ENST00000211921 LTN1O94822 1766 aa16.04■□□□□ 0.16
LST1-201ENST00000211921 USP54Q70EL1 1684 aa16.04■□□□□ 0.16
LST1-201ENST00000211921 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
LST1-201ENST00000211921 AATKQ6ZMQ8 1374 aa16.03■□□□□ 0.16
LST1-201ENST00000211921 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
LST1-201ENST00000211921 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
LST1-201ENST00000211921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.03■□□□□ 0.16
LST1-201ENST00000211921 COL18A1P39060 1754 aa16.03■□□□□ 0.16
LST1-201ENST00000211921 CRB1P82279 1406 aa16.02■□□□□ 0.16
LST1-201ENST00000211921 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
LST1-201ENST00000211921 TNS1Q9HBL0 1735 aaKnown RBP16.02■□□□□ 0.15
LST1-201ENST00000211921 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
LST1-201ENST00000211921 USP47Q96K76 1375 aa16.01■□□□□ 0.15
LST1-201ENST00000211921 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
LST1-201ENST00000211921 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
LST1-201ENST00000211921 NFAT5O94916 1531 aa16.01■□□□□ 0.15
LST1-201ENST00000211921 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
LST1-201ENST00000211921 BAG6P46379 1132 aa16.01■□□□□ 0.15
LST1-201ENST00000211921 ABCC6O95255 1503 aa16■□□□□ 0.15
LST1-201ENST00000211921 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
LST1-201ENST00000211921 PDE3BQ13370 1112 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms