RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.13
DNMT3B-201ENST00000201963 RIMS2Q9UQ26 1411 aa14.21□□□□□ -0.13
DNMT3B-201ENST00000201963 A0A0U1RQG5 324 aaPredicted RBP14.21□□□□□ -0.13
DNMT3B-201ENST00000201963 PPP2R1AP30153 589 aa14.21□□□□□ -0.13
DNMT3B-201ENST00000201963 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
DNMT3B-201ENST00000201963 TPM2P07951 284 aa14.21□□□□□ -0.14
DNMT3B-201ENST00000201963 FGD1P98174 961 aa14.2□□□□□ -0.14
DNMT3B-201ENST00000201963 NUDT16Q96DE0 195 aaKnown RBP14.2□□□□□ -0.14
DNMT3B-201ENST00000201963 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
DNMT3B-201ENST00000201963 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 MBD5Q9P267 1494 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 PDE3AQ14432 1141 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 MSH6P52701 1360 aa14.19□□□□□ -0.14
DNMT3B-201ENST00000201963 TRIM6-TRIM34B2RNG4 842 aa14.18□□□□□ -0.14
DNMT3B-201ENST00000201963 NRDCO43847 1150 aa14.18□□□□□ -0.14
DNMT3B-201ENST00000201963 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
DNMT3B-201ENST00000201963 ZNF335Q9H4Z2 1342 aaPredicted RBP14.18□□□□□ -0.14
DNMT3B-201ENST00000201963 CAVIN1Q6NZI2 390 aaKnown RBP14.18□□□□□ -0.14
DNMT3B-201ENST00000201963 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
DNMT3B-201ENST00000201963 CSPP1Q1MSJ5 1256 aa14.17□□□□□ -0.14
DNMT3B-201ENST00000201963 SHROOM2Q13796 1616 aa14.17□□□□□ -0.14
DNMT3B-201ENST00000201963 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
DNMT3B-201ENST00000201963 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
DNMT3B-201ENST00000201963 CFAP43Q8NDM7 1665 aa14.16□□□□□ -0.14
DNMT3B-201ENST00000201963 PHF14O94880 888 aa14.16□□□□□ -0.14
DNMT3B-201ENST00000201963 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
DNMT3B-201ENST00000201963 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
DNMT3B-201ENST00000201963 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 RUNDC1Q96C34 613 aa14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 MAP7D2Q96T17 732 aa14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 NUCB2P80303 420 aa14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 SLC4A10Q6U841 1118 aa14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.14
DNMT3B-201ENST00000201963 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
DNMT3B-201ENST00000201963 CABLES1Q8TDN4 633 aa14.14□□□□□ -0.15
DNMT3B-201ENST00000201963 CCDC173Q0VFZ6 552 aa14.13□□□□□ -0.15
DNMT3B-201ENST00000201963 ABCC1P33527 1531 aa14.13□□□□□ -0.15
DNMT3B-201ENST00000201963 MLH3Q9UHC1 1453 aa14.13□□□□□ -0.15
DNMT3B-201ENST00000201963 AAMPQ13685 434 aa14.13□□□□□ -0.15
DNMT3B-201ENST00000201963 TBC1D2Q9BYX2 928 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 TOM1L2Q6ZVM7 507 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 C19orf44Q9H6X5 657 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 NPATQ14207 1427 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 ZNF771Q7L3S4 317 aaPredicted RBP14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 MPNDQ8N594 471 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 C8orf37Q96NL8 207 aa14.12□□□□□ -0.15
DNMT3B-201ENST00000201963 HMMRO75330 724 aa14.11□□□□□ -0.15
DNMT3B-201ENST00000201963 CHRNA2Q15822 529 aa14.11□□□□□ -0.15
DNMT3B-201ENST00000201963 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
DNMT3B-201ENST00000201963 DIP2BQ9P265 1576 aa14.11□□□□□ -0.15
DNMT3B-201ENST00000201963 SLFN5Q08AF3 891 aa14.11□□□□□ -0.15
DNMT3B-201ENST00000201963 PANK2Q9BZ23 570 aa14.11□□□□□ -0.15
DNMT3B-201ENST00000201963 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
DNMT3B-201ENST00000201963 WASLO00401 505 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-201ENST00000201963 TNNT3P45378 269 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-201ENST00000201963 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
DNMT3B-201ENST00000201963 PRPF40AO75400 957 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-201ENST00000201963 PODXL2Q9NZ53 605 aa14.1□□□□□ -0.15
DNMT3B-201ENST00000201963 CFAP74Q9C0B2 1584 aa14.09□□□□□ -0.15
DNMT3B-201ENST00000201963 HMOX1P09601 288 aa14.09□□□□□ -0.15
DNMT3B-201ENST00000201963 TBX22Q9Y458 520 aa14.09□□□□□ -0.15
DNMT3B-201ENST00000201963 RIPK4P57078 832 aa14.09□□□□□ -0.15
DNMT3B-201ENST00000201963 RRS1Q15050 365 aaKnown RBP14.09□□□□□ -0.15
DNMT3B-201ENST00000201963 MTERF4Q7Z6M4 381 aaKnown RBP14.09□□□□□ -0.15
DNMT3B-201ENST00000201963 REC8O95072 547 aa14.08□□□□□ -0.15
DNMT3B-201ENST00000201963 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.15
DNMT3B-201ENST00000201963 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.15
DNMT3B-201ENST00000201963 TMEM2Q9UHN6 1383 aa14.08□□□□□ -0.16
DNMT3B-201ENST00000201963 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
DNMT3B-201ENST00000201963 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
DNMT3B-201ENST00000201963 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.16
DNMT3B-201ENST00000201963 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.16
DNMT3B-201ENST00000201963 MTHFSP49914 203 aa14.07□□□□□ -0.16
DNMT3B-201ENST00000201963 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
DNMT3B-201ENST00000201963 CHMP3Q9Y3E7 222 aa14.07□□□□□ -0.16
DNMT3B-201ENST00000201963 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
DNMT3B-201ENST00000201963 CCDC39Q9UFE4 941 aa14.07□□□□□ -0.16
DNMT3B-201ENST00000201963 ZNF592Q92610 1267 aa14.07□□□□□ -0.16
DNMT3B-201ENST00000201963 EXOSC9Q06265 439 aaKnown RBP14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 KIF16BQ96L93 1317 aa14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 UQCRHLA0A096LP55 91 aa14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 UQCRHP07919 91 aa14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 DNMT1P26358 1616 aaKnown RBP14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 PREX2Q70Z35 1606 aa14.06□□□□□ -0.16
DNMT3B-201ENST00000201963 IGHDP01880 384 aa14.05□□□□□ -0.16
DNMT3B-201ENST00000201963 NME9Q86XW9 330 aa14.05□□□□□ -0.16
DNMT3B-201ENST00000201963 FBLN1P23142 703 aa14.05□□□□□ -0.16
DNMT3B-201ENST00000201963 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms